RNA–Protein interactions for RNA: ENST00000493191.1

HMG20B-214, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 852 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-214ENST00000493191 CNPY2Q9Y2B0 182 aa26.94■■□□□ 1.9
HMG20B-214ENST00000493191 RNF113AO15541 343 aaKnown RBP26.93■■□□□ 1.9
HMG20B-214ENST00000493191 AKR1A1P14550 325 aa26.93■■□□□ 1.9
HMG20B-214ENST00000493191 A0A1W2PQ45 241 aaPredicted RBP26.92■■□□□ 1.9
HMG20B-214ENST00000493191 A0A1W2PQY0 241 aa26.92■■□□□ 1.9
HMG20B-214ENST00000493191 ITGB8P26012 769 aa26.92■■□□□ 1.9
HMG20B-214ENST00000493191 CPXCR1Q8N123 301 aa26.92■■□□□ 1.9
HMG20B-214ENST00000493191 PRPF38AQ8NAV1 312 aaKnown RBP26.92■■□□□ 1.9
HMG20B-214ENST00000493191 DDX11Q96FC9 970 aa26.92■■□□□ 1.9
HMG20B-214ENST00000493191 GPATCH3Q96I76 525 aa26.92■■□□□ 1.9
HMG20B-214ENST00000493191 EPB41L4AQ9HCS5 686 aaPredicted RBP26.92■■□□□ 1.9
HMG20B-214ENST00000493191 TACC3Q9Y6A5 838 aa26.92■■□□□ 1.9
HMG20B-214ENST00000493191 MYH4Q9Y623 1939 aa26.92■■□□□ 1.9
HMG20B-214ENST00000493191 GPAA1O43292 621 aa26.91■■□□□ 1.9
HMG20B-214ENST00000493191 PRDM1O75626 825 aa26.91■■□□□ 1.9
HMG20B-214ENST00000493191 APPP05067 770 aa26.91■■□□□ 1.9
HMG20B-214ENST00000493191 CLTBP09497 229 aa26.91■■□□□ 1.9
HMG20B-214ENST00000493191 TDO2P48775 406 aa26.91■■□□□ 1.9
HMG20B-214ENST00000493191 DCTPP1Q9H773 170 aa26.91■■□□□ 1.9
HMG20B-214ENST00000493191 ROBO3Q96MS0 1386 aa26.91■■□□□ 1.9
HMG20B-214ENST00000493191 IGKV6D-41A0A0C4DH26 115 aa26.9■■□□□ 1.9
HMG20B-214ENST00000493191 M0R2C6 588 aa26.9■■□□□ 1.9
HMG20B-214ENST00000493191 PQBP1O60828 265 aaKnown RBP26.9■■□□□ 1.9
HMG20B-214ENST00000493191 SNAI1O95863 264 aaPredicted RBP26.9■■□□□ 1.9
HMG20B-214ENST00000493191 ZNF444Q8N0Y2 327 aaPredicted RBP26.9■■□□□ 1.9
HMG20B-214ENST00000493191 KIFC2Q96AC6 838 aa26.9■■□□□ 1.9
HMG20B-214ENST00000493191 CTDP1Q9Y5B0 961 aaPredicted RBP26.9■■□□□ 1.9
HMG20B-214ENST00000493191 ZBED4O75132 1171 aa26.89■■□□□ 1.9
HMG20B-214ENST00000493191 ADAMTS4O75173 837 aa26.89■■□□□ 1.9
HMG20B-214ENST00000493191 MSL3Q8N5Y2 521 aaKnown RBP26.89■■□□□ 1.9
HMG20B-214ENST00000493191 RAVER2Q9HCJ3 691 aaKnown RBP26.89■■□□□ 1.9
HMG20B-214ENST00000493191 EYSQ5T1H1 3165 aa26.88■■□□□ 1.89
HMG20B-214ENST00000493191 DNAJC25-GNG10A0A024R161 153 aa26.88■■□□□ 1.89
HMG20B-214ENST00000493191 ZFYP08048 801 aaPredicted RBP26.88■■□□□ 1.89
HMG20B-214ENST00000493191 GNAT2P19087 354 aa26.88■■□□□ 1.89
HMG20B-214ENST00000493191 CEP95Q96GE4 821 aa26.88■■□□□ 1.89
HMG20B-214ENST00000493191 CDX2Q99626 313 aaPredicted RBP26.88■■□□□ 1.89
HMG20B-214ENST00000493191 SEMA6BQ9H3T3 888 aa26.88■■□□□ 1.89
HMG20B-214ENST00000493191 ZHX1Q9UKY1 873 aaPredicted RBP26.88■■□□□ 1.89
HMG20B-214ENST00000493191 FAM184BQ9ULE4 1060 aa26.88■■□□□ 1.89
HMG20B-214ENST00000493191 SYNGAP1Q96PV0 1343 aa26.88■■□□□ 1.89
HMG20B-214ENST00000493191 SYNRGQ9UMZ2 1314 aa26.88■■□□□ 1.89
HMG20B-214ENST00000493191 ATP2A1O14983 1001 aa26.87■■□□□ 1.89
HMG20B-214ENST00000493191 MAMDC4Q6UXC1 1216 aa26.87■■□□□ 1.89
HMG20B-214ENST00000493191 PHF6Q8IWS0 365 aaKnown RBP eCLIP26.87■■□□□ 1.89
HMG20B-214ENST00000493191 MKL1Q969V6 931 aa26.87■■□□□ 1.89
HMG20B-214ENST00000493191 TSEN34Q9BSV6 310 aaKnown RBP26.87■■□□□ 1.89
HMG20B-214ENST00000493191 ZNF287Q9HBT7 754 aa26.87■■□□□ 1.89
HMG20B-214ENST00000493191 TMEM39AQ9NV64 488 aa26.87■■□□□ 1.89
HMG20B-214ENST00000493191 MTMR4Q9NYA4 1195 aa26.87■■□□□ 1.89
HMG20B-214ENST00000493191 MCM3APO60318 1980 aa26.86■■□□□ 1.89
HMG20B-214ENST00000493191 PATL2C9JE40 543 aaKnown RBP26.86■■□□□ 1.89
HMG20B-214ENST00000493191 KIAA0355O15063 1070 aa26.86■■□□□ 1.89
HMG20B-214ENST00000493191 RAG1P15918 1043 aa26.86■■□□□ 1.89
HMG20B-214ENST00000493191 ACLYP53396 1101 aa26.86■■□□□ 1.89
HMG20B-214ENST00000493191 EPHB4P54760 987 aa26.86■■□□□ 1.89
HMG20B-214ENST00000493191 IFNL3Q8IZI9 196 aa26.86■■□□□ 1.89
HMG20B-214ENST00000493191 LRRC47Q8N1G4 583 aaKnown RBP26.86■■□□□ 1.89
HMG20B-214ENST00000493191 SLC38A10Q9HBR0 1119 aa26.86■■□□□ 1.89
HMG20B-214ENST00000493191 STARD7Q9NQZ5 370 aa26.86■■□□□ 1.89
HMG20B-214ENST00000493191 FEM1BQ9UK73 627 aa26.86■■□□□ 1.89
HMG20B-214ENST00000493191 CDH23Q9H251 3354 aa26.85■■□□□ 1.89
HMG20B-214ENST00000493191 SMAD3P84022 425 aaKnown RBP26.85■■□□□ 1.89
HMG20B-214ENST00000493191 KCNA10Q16322 511 aa26.85■■□□□ 1.89
HMG20B-214ENST00000493191 KLHDC9Q8NEP7 349 aa26.85■■□□□ 1.89
HMG20B-214ENST00000493191 SEC62Q99442 399 aaKnown RBP26.85■■□□□ 1.89
HMG20B-214ENST00000493191 MYADML2A6NDP7 307 aa26.84■■□□□ 1.89
HMG20B-214ENST00000493191 TTLL1O95922 423 aa26.84■■□□□ 1.89
HMG20B-214ENST00000493191 FAAP100Q0VG06 881 aa26.84■■□□□ 1.89
HMG20B-214ENST00000493191 ZNF467Q7Z7K2 595 aaPredicted RBP26.84■■□□□ 1.89
HMG20B-214ENST00000493191 ANKRD35Q8N283 1001 aa26.84■■□□□ 1.89
HMG20B-214ENST00000493191 NUP133Q8WUM0 1156 aa26.84■■□□□ 1.89
HMG20B-214ENST00000493191 RNPC3Q96LT9 517 aaKnown RBP26.84■■□□□ 1.89
HMG20B-214ENST00000493191 TTYH1Q9H313 450 aaPredicted RBP26.84■■□□□ 1.89
HMG20B-214ENST00000493191 DUSP11O75319 330 aaKnown RBP26.83■■□□□ 1.89
HMG20B-214ENST00000493191 IRX5P78411 483 aaPredicted RBP26.83■■□□□ 1.89
HMG20B-214ENST00000493191 ACVR2BQ13705 512 aa26.83■■□□□ 1.89
HMG20B-214ENST00000493191 SLFN13Q68D06 897 aa26.83■■□□□ 1.89
HMG20B-214ENST00000493191 CCSAPQ6IQ19 270 aaPredicted RBP26.83■■□□□ 1.89
HMG20B-214ENST00000493191 ANKRD33Q7Z3H0 272 aa26.83■■□□□ 1.89
HMG20B-214ENST00000493191 GMCL1P1Q8NEA9 526 aa26.83■■□□□ 1.89
HMG20B-214ENST00000493191 TOX2Q96NM4 488 aa26.83■■□□□ 1.89
HMG20B-214ENST00000493191 COL25A1Q9BXS0 654 aaPredicted RBP26.83■■□□□ 1.89
HMG20B-214ENST00000493191 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.83■■□□□ 1.89
HMG20B-214ENST00000493191 PRUNE2Q8WUY3 3088 aa26.82■■□□□ 1.88
HMG20B-214ENST00000493191 MOXD2PA6NHM9 499 aa26.82■■□□□ 1.88
HMG20B-214ENST00000493191 DCDC2CA8MYV0 355 aa26.82■■□□□ 1.88
HMG20B-214ENST00000493191 ADCY6O43306 1168 aa26.82■■□□□ 1.88
HMG20B-214ENST00000493191 TSPY3P0CV98 308 aa26.82■■□□□ 1.88
HMG20B-214ENST00000493191 TSPY8P0CW00 308 aa26.82■■□□□ 1.88
HMG20B-214ENST00000493191 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.82■■□□□ 1.88
HMG20B-214ENST00000493191 CHST13Q8NET6 341 aa26.82■■□□□ 1.88
HMG20B-214ENST00000493191 CHMP4CQ96CF2 233 aa26.82■■□□□ 1.88
HMG20B-214ENST00000493191 FGD4Q96M96 766 aa26.82■■□□□ 1.88
HMG20B-214ENST00000493191 NACAP1Q9BZK3 213 aa26.82■■□□□ 1.88
HMG20B-214ENST00000493191 HOMER2Q9NSB8 354 aa26.82■■□□□ 1.88
HMG20B-214ENST00000493191 ISY1Q9ULR0 285 aaKnown RBP26.82■■□□□ 1.88
HMG20B-214ENST00000493191 BMP3P12645 472 aa26.81■■□□□ 1.88
HMG20B-214ENST00000493191 FPGSQ05932 587 aa26.81■■□□□ 1.88
HMG20B-214ENST00000493191 PDE4BQ07343 736 aa26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms