RNA–Protein interactions for RNA: ENST00000493161.1

SAMM50-204, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 3

Gene SAMM50, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-204ENST00000493161 HMMRO75330 724 aa16.45■□□□□ 0.22
SAMM50-204ENST00000493161 RASA1P20936 1047 aa16.45■□□□□ 0.22
SAMM50-204ENST00000493161 SLC4A3P48751 1232 aa16.45■□□□□ 0.22
SAMM50-204ENST00000493161 FPGSQ05932 587 aa16.45■□□□□ 0.22
SAMM50-204ENST00000493161 GRIN2CQ14957 1233 aa16.45■□□□□ 0.22
SAMM50-204ENST00000493161 KCNA10Q16322 511 aa16.45■□□□□ 0.22
SAMM50-204ENST00000493161 SNRNP48Q6IEG0 339 aaKnown RBP16.45■□□□□ 0.22
SAMM50-204ENST00000493161 CCSAPQ6IQ19 270 aaPredicted RBP16.45■□□□□ 0.22
SAMM50-204ENST00000493161 ANKRD33Q7Z3H0 272 aa16.45■□□□□ 0.22
SAMM50-204ENST00000493161 KLHDC9Q8NEP7 349 aa16.45■□□□□ 0.22
SAMM50-204ENST00000493161 SLF1Q9BQI6 1058 aa16.45■□□□□ 0.22
SAMM50-204ENST00000493161 DNAJC25-GNG10A0A024R161 153 aa16.44■□□□□ 0.22
SAMM50-204ENST00000493161 SMARCA5O60264 1052 aaPredicted RBP16.44■□□□□ 0.22
SAMM50-204ENST00000493161 MIER1Q8N108 512 aa16.44■□□□□ 0.22
SAMM50-204ENST00000493161 USP38Q8NB14 1042 aa16.44■□□□□ 0.22
SAMM50-204ENST00000493161 STRBPQ96SI9 672 aaKnown RBP16.44■□□□□ 0.22
SAMM50-204ENST00000493161 TSEN34Q9BSV6 310 aaKnown RBP16.44■□□□□ 0.22
SAMM50-204ENST00000493161 STARD7Q9NQZ5 370 aa16.44■□□□□ 0.22
SAMM50-204ENST00000493161 ZHX1Q9UKY1 873 aaPredicted RBP16.44■□□□□ 0.22
SAMM50-204ENST00000493161 GSG1L2A8MUP6 293 aa16.43■□□□□ 0.22
SAMM50-204ENST00000493161 F5H6K3 240 aa16.43■□□□□ 0.22
SAMM50-204ENST00000493161 NDUFB10O96000 172 aa16.43■□□□□ 0.22
SAMM50-204ENST00000493161 KLRC3Q07444 240 aa16.43■□□□□ 0.22
SAMM50-204ENST00000493161 MAMDC4Q6UXC1 1216 aa16.43■□□□□ 0.22
SAMM50-204ENST00000493161 C16orf59Q7L2K0 433 aa16.43■□□□□ 0.22
SAMM50-204ENST00000493161 CPXCR1Q8N123 301 aa16.43■□□□□ 0.22
SAMM50-204ENST00000493161 DDX11Q96FC9 970 aa16.43■□□□□ 0.22
SAMM50-204ENST00000493161 DDRGK1Q96HY6 314 aa16.43■□□□□ 0.22
SAMM50-204ENST00000493161 FGD4Q96M96 766 aa16.43■□□□□ 0.22
SAMM50-204ENST00000493161 TOX2Q96NM4 488 aa16.43■□□□□ 0.22
SAMM50-204ENST00000493161 TEX13BQ9BXU2 312 aa16.43■□□□□ 0.22
SAMM50-204ENST00000493161 FAM184BQ9ULE4 1060 aa16.43■□□□□ 0.22
SAMM50-204ENST00000493161 MYH7P12883 1935 aa16.43■□□□□ 0.22
SAMM50-204ENST00000493161 DCDC2CA8MYV0 355 aa16.42■□□□□ 0.22
SAMM50-204ENST00000493161 DNAJB2P25686 324 aa16.42■□□□□ 0.22
SAMM50-204ENST00000493161 COPB2P35606 906 aa16.42■□□□□ 0.22
SAMM50-204ENST00000493161 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.42■□□□□ 0.22
SAMM50-204ENST00000493161 RAVER2Q9HCJ3 691 aaKnown RBP16.42■□□□□ 0.22
SAMM50-204ENST00000493161 NYAP2Q9P242 653 aa16.42■□□□□ 0.22
SAMM50-204ENST00000493161 ARPP21Q9UBL0 812 aaPredicted RBP16.42■□□□□ 0.22
SAMM50-204ENST00000493161 CLIP2Q9UDT6 1046 aa16.42■□□□□ 0.22
SAMM50-204ENST00000493161 TBX21Q9UL17 535 aa16.42■□□□□ 0.22
SAMM50-204ENST00000493161 DDX19BQ9UMR2 479 aa16.42■□□□□ 0.22
SAMM50-204ENST00000493161 SYNGAP1Q96PV0 1343 aa16.42■□□□□ 0.22
SAMM50-204ENST00000493161 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.41■□□□□ 0.22
SAMM50-204ENST00000493161 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.41■□□□□ 0.22
SAMM50-204ENST00000493161 MOXD2PA6NHM9 499 aa16.41■□□□□ 0.22
SAMM50-204ENST00000493161 GRXCR1A8MXD5 290 aa16.41■□□□□ 0.22
SAMM50-204ENST00000493161 MINDY4BA8MYZ0 360 aa16.41■□□□□ 0.22
SAMM50-204ENST00000493161 TIMP1P01033 207 aa16.41■□□□□ 0.22
SAMM50-204ENST00000493161 SBK1Q52WX2 424 aa16.41■□□□□ 0.22
SAMM50-204ENST00000493161 MSL3Q8N5Y2 521 aaKnown RBP16.41■□□□□ 0.22
SAMM50-204ENST00000493161 PRPF38AQ8NAV1 312 aaKnown RBP16.41■□□□□ 0.22
SAMM50-204ENST00000493161 NUP133Q8WUM0 1156 aa16.41■□□□□ 0.22
SAMM50-204ENST00000493161 OSBP2Q969R2 916 aa16.41■□□□□ 0.22
SAMM50-204ENST00000493161 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.41■□□□□ 0.22
SAMM50-204ENST00000493161 TMEM265A0A087WTH1 108 aa16.4■□□□□ 0.22
SAMM50-204ENST00000493161 IGKV6D-41A0A0C4DH26 115 aa16.4■□□□□ 0.22
SAMM50-204ENST00000493161 DUSP11O75319 330 aaKnown RBP16.4■□□□□ 0.22
SAMM50-204ENST00000493161 PRDM1O75626 825 aa16.4■□□□□ 0.22
SAMM50-204ENST00000493161 ASGR1P07306 291 aa16.4■□□□□ 0.22
SAMM50-204ENST00000493161 C6orf222P0C671 652 aaPredicted RBP16.4■□□□□ 0.22
SAMM50-204ENST00000493161 PBX2P40425 430 aa16.4■□□□□ 0.22
SAMM50-204ENST00000493161 CDK7P50613 346 aa16.4■□□□□ 0.22
SAMM50-204ENST00000493161 ACVR2BQ13705 512 aa16.4■□□□□ 0.22
SAMM50-204ENST00000493161 ZSCAN25Q6NSZ9 544 aa16.4■□□□□ 0.22
SAMM50-204ENST00000493161 KIFC2Q96AC6 838 aa16.4■□□□□ 0.22
SAMM50-204ENST00000493161 MKNK2Q9HBH9 465 aa16.4■□□□□ 0.22
SAMM50-204ENST00000493161 EPB41L4AQ9HCS5 686 aaPredicted RBP16.4■□□□□ 0.22
SAMM50-204ENST00000493161 PRDM6Q9NQX0 595 aa16.4■□□□□ 0.22
SAMM50-204ENST00000493161 ATP2A1O14983 1001 aa16.39■□□□□ 0.21
SAMM50-204ENST00000493161 CTAGE5O15320 804 aa16.39■□□□□ 0.21
SAMM50-204ENST00000493161 ZBED4O75132 1171 aa16.39■□□□□ 0.21
SAMM50-204ENST00000493161 MS4A1P11836 297 aa16.39■□□□□ 0.21
SAMM50-204ENST00000493161 CSF2RAP15509 400 aa16.39■□□□□ 0.21
SAMM50-204ENST00000493161 CST5P28325 142 aaPredicted RBP16.39■□□□□ 0.21
SAMM50-204ENST00000493161 CCDC144BQ3MJ40 725 aa16.39■□□□□ 0.21
SAMM50-204ENST00000493161 TMEM240Q5SV17 173 aa16.39■□□□□ 0.21
SAMM50-204ENST00000493161 TSHZ3Q63HK5 1081 aa16.39■□□□□ 0.21
SAMM50-204ENST00000493161 MFSD5Q6N075 450 aa16.39■□□□□ 0.21
SAMM50-204ENST00000493161 LRRCC1Q9C099 1032 aa16.39■□□□□ 0.21
SAMM50-204ENST00000493161 ZNF576Q9H609 170 aa16.39■□□□□ 0.21
SAMM50-204ENST00000493161 SLC38A10Q9HBR0 1119 aa16.39■□□□□ 0.21
SAMM50-204ENST00000493161 ACRP10323 421 aa16.38■□□□□ 0.21
SAMM50-204ENST00000493161 PTGS1P23219 599 aa16.38■□□□□ 0.21
SAMM50-204ENST00000493161 CNTN2Q02246 1040 aa16.38■□□□□ 0.21
SAMM50-204ENST00000493161 C20orf194Q5TEA3 1177 aa16.38■□□□□ 0.21
SAMM50-204ENST00000493161 ARMCX2Q7L311 632 aa16.38■□□□□ 0.21
SAMM50-204ENST00000493161 ZNF467Q7Z7K2 595 aaPredicted RBP16.38■□□□□ 0.21
SAMM50-204ENST00000493161 LRRC47Q8N1G4 583 aaKnown RBP16.38■□□□□ 0.21
SAMM50-204ENST00000493161 ANKRD35Q8N283 1001 aa16.38■□□□□ 0.21
SAMM50-204ENST00000493161 VTI1AQ96AJ9 217 aa16.38■□□□□ 0.21
SAMM50-204ENST00000493161 TIFAQ96CG3 184 aa16.38■□□□□ 0.21
SAMM50-204ENST00000493161 CEP95Q96GE4 821 aa16.38■□□□□ 0.21
SAMM50-204ENST00000493161 GLT1D1Q96MS3 346 aa16.38■□□□□ 0.21
SAMM50-204ENST00000493161 PPP1R12CQ9BZL4 782 aa16.38■□□□□ 0.21
SAMM50-204ENST00000493161 KATNBL1Q9H079 304 aa16.38■□□□□ 0.21
SAMM50-204ENST00000493161 UPF3AQ9H1J1 476 aaKnown RBP16.38■□□□□ 0.21
SAMM50-204ENST00000493161 DDX49Q9Y6V7 483 aaKnown RBP16.38■□□□□ 0.21
SAMM50-204ENST00000493161 ELP1O95163 1332 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms