RNA–Protein interactions for RNA: ENST00000492909.1

PDZRN3-210, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best)

Gene PDZRN3, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-210ENST00000492909 KCNJ14Q9UNX9 436 aa16.23■□□□□ 0.19
PDZRN3-210ENST00000492909 PTPRAP18433 802 aa16.23■□□□□ 0.19
PDZRN3-210ENST00000492909 SLC16A2P36021 539 aa16.23■□□□□ 0.19
PDZRN3-210ENST00000492909 IREB2P48200 963 aaKnown RBP16.23■□□□□ 0.19
PDZRN3-210ENST00000492909 MAP3K9P80192 1104 aa16.23■□□□□ 0.19
PDZRN3-210ENST00000492909 HTRA3P83110 453 aa16.23■□□□□ 0.19
PDZRN3-210ENST00000492909 KIF23Q02241 960 aaPredicted RBP16.23■□□□□ 0.19
PDZRN3-210ENST00000492909 GNL2Q13823 731 aaKnown RBP16.23■□□□□ 0.19
PDZRN3-210ENST00000492909 ZYXQ15942 572 aaKnown RBP16.23■□□□□ 0.19
PDZRN3-210ENST00000492909 HOMER1Q86YM7 354 aa16.23■□□□□ 0.19
PDZRN3-210ENST00000492909 ADGRF4Q8IZF3 695 aa16.23■□□□□ 0.19
PDZRN3-210ENST00000492909 PIGSQ96S52 555 aa16.23■□□□□ 0.19
PDZRN3-210ENST00000492909 NUP88Q99567 741 aaPredicted RBP16.23■□□□□ 0.19
PDZRN3-210ENST00000492909 WDR18Q9BV38 432 aa16.23■□□□□ 0.19
PDZRN3-210ENST00000492909 KIAA1683Q9H0B3 1180 aa16.23■□□□□ 0.19
PDZRN3-210ENST00000492909 SH3GLB2Q9NR46 395 aa16.23■□□□□ 0.19
PDZRN3-210ENST00000492909 USP17L10C9JJH3 530 aa16.22■□□□□ 0.19
PDZRN3-210ENST00000492909 DNM1Q05193 864 aaKnown RBP16.22■□□□□ 0.19
PDZRN3-210ENST00000492909 KIAA1755Q5JYT7 1200 aa16.22■□□□□ 0.19
PDZRN3-210ENST00000492909 BRAPQ7Z569 592 aa16.22■□□□□ 0.19
PDZRN3-210ENST00000492909 PHF20Q9BVI0 1012 aa16.22■□□□□ 0.19
PDZRN3-210ENST00000492909 JMJD4Q9H9V9 463 aa16.22■□□□□ 0.19
PDZRN3-210ENST00000492909 TMEM232C9JQI7 657 aa16.21■□□□□ 0.19
PDZRN3-210ENST00000492909 NCLP19338 710 aaKnown RBP16.21■□□□□ 0.19
PDZRN3-210ENST00000492909 IKQ13123 557 aaPredicted RBP16.21■□□□□ 0.19
PDZRN3-210ENST00000492909 FAM173BQ6P4H8 233 aa16.21■□□□□ 0.19
PDZRN3-210ENST00000492909 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.21■□□□□ 0.19
PDZRN3-210ENST00000492909 MOB2Q70IA6 237 aa16.21■□□□□ 0.19
PDZRN3-210ENST00000492909 HEATR3Q7Z4Q2 680 aa16.21■□□□□ 0.19
PDZRN3-210ENST00000492909 DIS3L2Q8IYB7 885 aaKnown RBP16.21■□□□□ 0.19
PDZRN3-210ENST00000492909 FAM177A1Q8N128 213 aaPredicted RBP16.21■□□□□ 0.19
PDZRN3-210ENST00000492909 LPAR1Q92633 364 aa16.21■□□□□ 0.19
PDZRN3-210ENST00000492909 GPKOWQ92917 476 aaPredicted RBP eCLIP16.21■□□□□ 0.19
PDZRN3-210ENST00000492909 SHISA4Q96DD7 197 aa16.21■□□□□ 0.19
PDZRN3-210ENST00000492909 BARHL2Q9NY43 387 aa16.21■□□□□ 0.19
PDZRN3-210ENST00000492909 KIF28PB7ZC32 967 aa16.21■□□□□ 0.18
PDZRN3-210ENST00000492909 hCG_1984214I3L0E3 225 aa16.21■□□□□ 0.18
PDZRN3-210ENST00000492909 U2AF2P26368 475 aaKnown RBP eCLIP16.21■□□□□ 0.18
PDZRN3-210ENST00000492909 STAT2P52630 851 aa16.21■□□□□ 0.18
PDZRN3-210ENST00000492909 KRT85P78386 507 aa16.21■□□□□ 0.18
PDZRN3-210ENST00000492909 SPP2Q13103 211 aa16.21■□□□□ 0.18
PDZRN3-210ENST00000492909 FAM83BQ5T0W9 1011 aa16.21■□□□□ 0.18
PDZRN3-210ENST00000492909 WWC2Q6AWC2 1192 aa16.21■□□□□ 0.18
PDZRN3-210ENST00000492909 BTNL9Q6UXG8 535 aa16.21■□□□□ 0.18
PDZRN3-210ENST00000492909 ZNF713Q8N859 430 aaPredicted RBP16.21■□□□□ 0.18
PDZRN3-210ENST00000492909 ZNF280CQ8ND82 737 aa16.21■□□□□ 0.18
PDZRN3-210ENST00000492909 CCDC148Q8NFR7 591 aa16.21■□□□□ 0.18
PDZRN3-210ENST00000492909 CCDC12Q8WUD4 166 aaPredicted RBP16.21■□□□□ 0.18
PDZRN3-210ENST00000492909 MTMR8Q96EF0 704 aa16.21■□□□□ 0.18
PDZRN3-210ENST00000492909 FOXP1Q9H334 677 aaPredicted RBP16.21■□□□□ 0.18
PDZRN3-210ENST00000492909 BRMS1Q9HCU9 246 aa16.21■□□□□ 0.18
PDZRN3-210ENST00000492909 CSADQ9Y600 493 aa16.21■□□□□ 0.18
PDZRN3-210ENST00000492909 ZHX2Q9Y6X8 837 aa16.21■□□□□ 0.18
PDZRN3-210ENST00000492909 PNMA6FA0A0J9YX94 578 aa16.2■□□□□ 0.18
PDZRN3-210ENST00000492909 BTBD18B2RXH4 712 aa16.2■□□□□ 0.18
PDZRN3-210ENST00000492909 ZBTB5O15062 677 aa16.2■□□□□ 0.18
PDZRN3-210ENST00000492909 CALML3P27482 149 aa16.2■□□□□ 0.18
PDZRN3-210ENST00000492909 APLP1P51693 650 aa16.2■□□□□ 0.18
PDZRN3-210ENST00000492909 USP14P54578 494 aa16.2■□□□□ 0.18
PDZRN3-210ENST00000492909 NLRP5P59047 1200 aa16.2■□□□□ 0.18
PDZRN3-210ENST00000492909 MTMR2Q13614 643 aa16.2■□□□□ 0.18
PDZRN3-210ENST00000492909 VGLL4Q14135 290 aa16.2■□□□□ 0.18
PDZRN3-210ENST00000492909 TTLL12Q14166 644 aaPredicted RBP16.2■□□□□ 0.18
PDZRN3-210ENST00000492909 GRPEL1Q9HAV7 217 aa16.2■□□□□ 0.18
PDZRN3-210ENST00000492909 CNPY2Q9Y2B0 182 aa16.2■□□□□ 0.18
PDZRN3-210ENST00000492909 SNCAIPQ9Y6H5 919 aa16.2■□□□□ 0.18
PDZRN3-210ENST00000492909 TRPM7Q96QT4 1865 aa16.2■□□□□ 0.18
PDZRN3-210ENST00000492909 STXBP3O00186 592 aa16.19■□□□□ 0.18
PDZRN3-210ENST00000492909 KRT2P35908 639 aa16.19■□□□□ 0.18
PDZRN3-210ENST00000492909 BACE1P56817 501 aa16.19■□□□□ 0.18
PDZRN3-210ENST00000492909 MAP3K11Q16584 847 aa16.19■□□□□ 0.18
PDZRN3-210ENST00000492909 SYDE2Q5VT97 1194 aa16.19■□□□□ 0.18
PDZRN3-210ENST00000492909 ATL3Q6DD88 541 aa16.19■□□□□ 0.18
PDZRN3-210ENST00000492909 ANKRD13AQ8IZ07 590 aa16.19■□□□□ 0.18
PDZRN3-210ENST00000492909 CHURC1Q8WUH1 139 aa16.19■□□□□ 0.18
PDZRN3-210ENST00000492909 ZNF396Q96N95 335 aaPredicted RBP16.19■□□□□ 0.18
PDZRN3-210ENST00000492909 TMEM88BA6NKF7 163 aa16.18■□□□□ 0.18
PDZRN3-210ENST00000492909 WDR46O15213 610 aaKnown RBP16.18■□□□□ 0.18
PDZRN3-210ENST00000492909 PLA2G6O60733 806 aa16.18■□□□□ 0.18
PDZRN3-210ENST00000492909 NAPAP54920 295 aa16.18■□□□□ 0.18
PDZRN3-210ENST00000492909 TYW1BQ6NUM6 668 aa16.18■□□□□ 0.18
PDZRN3-210ENST00000492909 ARMC9Q7Z3E5 817 aa16.18■□□□□ 0.18
PDZRN3-210ENST00000492909 NOSTRINQ8IVI9 506 aa16.18■□□□□ 0.18
PDZRN3-210ENST00000492909 CFAP45Q9UL16 551 aa16.18■□□□□ 0.18
PDZRN3-210ENST00000492909 TRIM75PA6NK02 468 aa16.18■□□□□ 0.18
PDZRN3-210ENST00000492909 C19orf81C9J6K1 198 aa16.18■□□□□ 0.18
PDZRN3-210ENST00000492909 FIBPO43427 364 aa16.18■□□□□ 0.18
PDZRN3-210ENST00000492909 HSPA6P17066 643 aa16.18■□□□□ 0.18
PDZRN3-210ENST00000492909 NR5A1Q13285 461 aa16.18■□□□□ 0.18
PDZRN3-210ENST00000492909 NPY5RQ15761 445 aa16.18■□□□□ 0.18
PDZRN3-210ENST00000492909 CDC37Q16543 378 aaPredicted RBP16.18■□□□□ 0.18
PDZRN3-210ENST00000492909 CSPP1Q1MSJ5 1256 aa16.18■□□□□ 0.18
PDZRN3-210ENST00000492909 MYSM1Q5VVJ2 828 aa16.18■□□□□ 0.18
PDZRN3-210ENST00000492909 GALNT17Q6IS24 598 aa16.18■□□□□ 0.18
PDZRN3-210ENST00000492909 FAM160B2Q86V87 743 aa16.18■□□□□ 0.18
PDZRN3-210ENST00000492909 PANK2Q9BZ23 570 aa16.18■□□□□ 0.18
PDZRN3-210ENST00000492909 SCAND2PQ9GZW5 306 aaPredicted RBP16.18■□□□□ 0.18
PDZRN3-210ENST00000492909 GBA2Q9HCG7 927 aaPredicted RBP16.18■□□□□ 0.18
PDZRN3-210ENST00000492909 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.18■□□□□ 0.18
PDZRN3-210ENST00000492909 FEM1BQ9UK73 627 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms