RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 KCNB2Q92953 911 aa16.35■□□□□ 0.21
CCM2-217ENST00000492883 MOV10L1Q9BXT6 1211 aaKnown RBP16.35■□□□□ 0.21
CCM2-217ENST00000492883 SNX14Q9Y5W7 946 aa16.35■□□□□ 0.21
CCM2-217ENST00000492883 MYH8P13535 1937 aa16.35■□□□□ 0.21
CCM2-217ENST00000492883 HMGB1P09429 215 aaKnown RBP16.34■□□□□ 0.21
CCM2-217ENST00000492883 PARP1P09874 1014 aaKnown RBP16.34■□□□□ 0.21
CCM2-217ENST00000492883 GOLGA8HP0CJ92 632 aa16.34■□□□□ 0.21
CCM2-217ENST00000492883 ERCC3P19447 782 aa16.34■□□□□ 0.21
CCM2-217ENST00000492883 FLT3LGP49771 235 aa16.34■□□□□ 0.21
CCM2-217ENST00000492883 PRKCZQ05513 592 aa16.34■□□□□ 0.21
CCM2-217ENST00000492883 GPR142Q7Z601 462 aa16.34■□□□□ 0.21
CCM2-217ENST00000492883 PLEKHH3Q7Z736 793 aa16.34■□□□□ 0.21
CCM2-217ENST00000492883 CATIPQ7Z7H3 387 aa16.34■□□□□ 0.21
CCM2-217ENST00000492883 RAET1EQ8TD07 263 aa16.34■□□□□ 0.21
CCM2-217ENST00000492883 JAKMIP1Q96N16 626 aaKnown RBP16.34■□□□□ 0.21
CCM2-217ENST00000492883 LRRC2Q9BYS8 371 aa16.34■□□□□ 0.21
CCM2-217ENST00000492883 SENP2Q9HC62 589 aa16.34■□□□□ 0.21
CCM2-217ENST00000492883 PRR12Q9ULL5 1215 aa16.34■□□□□ 0.21
CCM2-217ENST00000492883 GABRQQ9UN88 632 aa16.34■□□□□ 0.21
CCM2-217ENST00000492883 PCNTO95613 3336 aa16.34■□□□□ 0.21
CCM2-217ENST00000492883 CCDC69A6NI79 296 aa16.33■□□□□ 0.2
CCM2-217ENST00000492883 SLC25A27O95847 323 aa16.33■□□□□ 0.2
CCM2-217ENST00000492883 PSMA5P28066 241 aa16.33■□□□□ 0.2
CCM2-217ENST00000492883 COL9A3Q14050 684 aaPredicted RBP16.33■□□□□ 0.2
CCM2-217ENST00000492883 ASPRV1Q53RT3 343 aa16.33■□□□□ 0.2
CCM2-217ENST00000492883 SYDE2Q5VT97 1194 aa16.33■□□□□ 0.2
CCM2-217ENST00000492883 BTNL9Q6UXG8 535 aa16.33■□□□□ 0.2
CCM2-217ENST00000492883 RIOX2Q8IUF8 465 aa16.33■□□□□ 0.2
CCM2-217ENST00000492883 SHCBP1Q8NEM2 672 aa16.33■□□□□ 0.2
CCM2-217ENST00000492883 REPS2Q8NFH8 660 aa16.33■□□□□ 0.2
CCM2-217ENST00000492883 NUDT12Q9BQG2 462 aa16.33■□□□□ 0.2
CCM2-217ENST00000492883 TEX13BQ9BXU2 312 aa16.33■□□□□ 0.2
CCM2-217ENST00000492883 MROH8Q9H579 483 aa16.33■□□□□ 0.2
CCM2-217ENST00000492883 LY9Q9HBG7 655 aa16.33■□□□□ 0.2
CCM2-217ENST00000492883 SLC38A10Q9HBR0 1119 aa16.33■□□□□ 0.2
CCM2-217ENST00000492883 RAVER2Q9HCJ3 691 aaKnown RBP16.33■□□□□ 0.2
CCM2-217ENST00000492883 GPHNQ9NQX3 736 aaPredicted RBP16.33■□□□□ 0.2
CCM2-217ENST00000492883 PTCH2Q9Y6C5 1203 aa16.33■□□□□ 0.2
CCM2-217ENST00000492883 IVNS1ABPQ9Y6Y0 642 aa16.33■□□□□ 0.2
CCM2-217ENST00000492883 SH2B2O14492 632 aaPredicted RBP16.32■□□□□ 0.2
CCM2-217ENST00000492883 SNAP25P60880 206 aa16.32■□□□□ 0.2
CCM2-217ENST00000492883 FGD1P98174 961 aa16.32■□□□□ 0.2
CCM2-217ENST00000492883 SNRNP48Q6IEG0 339 aaKnown RBP16.32■□□□□ 0.2
CCM2-217ENST00000492883 BLOC1S2Q6QNY1 142 aa16.32■□□□□ 0.2
CCM2-217ENST00000492883 NUP133Q8WUM0 1156 aa16.32■□□□□ 0.2
CCM2-217ENST00000492883 UBA5Q9GZZ9 404 aa16.32■□□□□ 0.2
CCM2-217ENST00000492883 ZNF214Q9UL59 606 aaPredicted RBP16.32■□□□□ 0.2
CCM2-217ENST00000492883 HPS5Q9UPZ3 1129 aa16.32■□□□□ 0.2
CCM2-217ENST00000492883 LAMA4Q16363 1823 aa16.31■□□□□ 0.2
CCM2-217ENST00000492883 WDR19Q8NEZ3 1342 aa16.31■□□□□ 0.2
CCM2-217ENST00000492883 ATP2A1O14983 1001 aa16.31■□□□□ 0.2
CCM2-217ENST00000492883 PTPREP23469 700 aa16.31■□□□□ 0.2
CCM2-217ENST00000492883 COPB2P35606 906 aa16.31■□□□□ 0.2
CCM2-217ENST00000492883 LIFRP42702 1097 aa16.31■□□□□ 0.2
CCM2-217ENST00000492883 OAZ1P54368 228 aa16.31■□□□□ 0.2
CCM2-217ENST00000492883 EXOSC10Q01780 885 aaKnown RBP16.31■□□□□ 0.2
CCM2-217ENST00000492883 CCDC174Q6PII3 467 aa16.31■□□□□ 0.2
CCM2-217ENST00000492883 SYNE3Q6ZMZ3 975 aa16.31■□□□□ 0.2
CCM2-217ENST00000492883 SOCS4Q8WXH5 440 aa16.31■□□□□ 0.2
CCM2-217ENST00000492883 ABHD8Q96I13 439 aa16.31■□□□□ 0.2
CCM2-217ENST00000492883 TCEANC2Q96MN5 208 aa16.31■□□□□ 0.2
CCM2-217ENST00000492883 GJD2Q9UKL4 321 aa16.31■□□□□ 0.2
CCM2-217ENST00000492883 CASP8AP2Q9UKL3 1982 aa16.31■□□□□ 0.2
CCM2-217ENST00000492883 STRNO43815 780 aa16.3■□□□□ 0.2
CCM2-217ENST00000492883 DHX16O60231 1041 aaKnown RBP16.3■□□□□ 0.2
CCM2-217ENST00000492883 SEC24BO95487 1268 aa16.3■□□□□ 0.2
CCM2-217ENST00000492883 CPA1P15085 419 aa16.3■□□□□ 0.2
CCM2-217ENST00000492883 CASTP20810 708 aaKnown RBP16.3■□□□□ 0.2
CCM2-217ENST00000492883 CYP2B6P20813 491 aa16.3■□□□□ 0.2
CCM2-217ENST00000492883 TROAPQ12815 778 aa16.3■□□□□ 0.2
CCM2-217ENST00000492883 SLC9C1Q4G0N8 1177 aa16.3■□□□□ 0.2
CCM2-217ENST00000492883 NBPF11Q86T75 865 aa16.3■□□□□ 0.2
CCM2-217ENST00000492883 ZNF654Q8IZM8 581 aa16.3■□□□□ 0.2
CCM2-217ENST00000492883 CPVLQ9H3G5 476 aa16.3■□□□□ 0.2
CCM2-217ENST00000492883 VAT1LQ9HCJ6 419 aa16.3■□□□□ 0.2
CCM2-217ENST00000492883 RIPK3Q9Y572 518 aa16.3■□□□□ 0.2
CCM2-217ENST00000492883 SLC12A7Q9Y666 1083 aa16.3■□□□□ 0.2
CCM2-217ENST00000492883 SLC15A5A6NIM6 579 aa16.29■□□□□ 0.2
CCM2-217ENST00000492883 KLRF2D3W0D1 207 aa16.29■□□□□ 0.2
CCM2-217ENST00000492883 ADCY3O60266 1144 aa16.29■□□□□ 0.2
CCM2-217ENST00000492883 DDAH1O94760 285 aa16.29■□□□□ 0.2
CCM2-217ENST00000492883 FCER1AP12319 257 aa16.29■□□□□ 0.2
CCM2-217ENST00000492883 RGS2P41220 211 aa16.29■□□□□ 0.2
CCM2-217ENST00000492883 IRF5Q13568 498 aa16.29■□□□□ 0.2
CCM2-217ENST00000492883 GRM4Q14833 912 aa16.29■□□□□ 0.2
CCM2-217ENST00000492883 C8orf34Q49A92 452 aa16.29■□□□□ 0.2
CCM2-217ENST00000492883 MORN1Q5T089 497 aa16.29■□□□□ 0.2
CCM2-217ENST00000492883 STAG2Q8N3U4 1231 aa16.29■□□□□ 0.2
CCM2-217ENST00000492883 CTCFLQ8NI51 663 aaPredicted RBP16.29■□□□□ 0.2
CCM2-217ENST00000492883 AGBL1Q96MI9 1066 aa16.29■□□□□ 0.2
CCM2-217ENST00000492883 MYL10Q9BUA6 226 aa16.29■□□□□ 0.2
CCM2-217ENST00000492883 RANBP17Q9H2T7 1088 aaKnown RBP16.29■□□□□ 0.2
CCM2-217ENST00000492883 BIN2Q9UBW5 565 aaPredicted RBP16.29■□□□□ 0.2
CCM2-217ENST00000492883 MAD2L2Q9UI95 211 aa16.29■□□□□ 0.2
CCM2-217ENST00000492883 PALM3A6NDB9 673 aaPredicted RBP16.28■□□□□ 0.2
CCM2-217ENST00000492883 CALM1P0DP23 149 aa16.28■□□□□ 0.2
CCM2-217ENST00000492883 CALM2P0DP24 149 aa16.28■□□□□ 0.2
CCM2-217ENST00000492883 CALM3P0DP25 149 aa16.28■□□□□ 0.2
CCM2-217ENST00000492883 ALAS1P13196 640 aa16.28■□□□□ 0.2
CCM2-217ENST00000492883 RPS6KB1P23443 525 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 85.7 ms