RNA–Protein interactions for RNA: ENST00000492626.5

SNX13-209, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 3,956 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-209ENST00000492626 TTC9Q92623 222 aa4.04□□□□□ -1.76
SNX13-209ENST00000492626 CHMP4AQ9BY43 222 aa4.04□□□□□ -1.76
SNX13-209ENST00000492626 TNKS2Q9H2K2 1166 aa4.04□□□□□ -1.76
SNX13-209ENST00000492626 ZMYM5Q9UJ78 669 aa4.04□□□□□ -1.76
SNX13-209ENST00000492626 AKAP12Q02952 1782 aa4.04□□□□□ -1.76
SNX13-209ENST00000492626 QRICH2Q9H0J4 1663 aa4.04□□□□□ -1.76
SNX13-209ENST00000492626 B2RBV5 119 aa4.04□□□□□ -1.76
SNX13-209ENST00000492626 SOX1O00570 391 aaPredicted RBP4.04□□□□□ -1.76
SNX13-209ENST00000492626 LONRF2Q1L5Z9 754 aa4.04□□□□□ -1.76
SNX13-209ENST00000492626 KLHL42Q9P2K6 505 aa4.04□□□□□ -1.76
SNX13-209ENST00000492626 G3BP2Q9UN86 482 aaKnown RBP4.04□□□□□ -1.76
SNX13-209ENST00000492626 SMG6Q86US8 1419 aaKnown RBP4.04□□□□□ -1.76
SNX13-209ENST00000492626 FMN2Q9NZ56 1722 aa4.04□□□□□ -1.76
SNX13-209ENST00000492626 DCDC2CA8MYV0 355 aa4.04□□□□□ -1.76
SNX13-209ENST00000492626 LINC01387J3KSC0 135 aa4.04□□□□□ -1.76
SNX13-209ENST00000492626 EPHA1P21709 976 aa4.04□□□□□ -1.76
SNX13-209ENST00000492626 ZNF252P-AS1Q0IIN9 211 aa4.04□□□□□ -1.76
SNX13-209ENST00000492626 HSP90AA2PQ14568 343 aaPredicted RBP4.04□□□□□ -1.76
SNX13-209ENST00000492626 OVOS1Q6IE37 1185 aa4.04□□□□□ -1.76
SNX13-209ENST00000492626 UNC5AQ6ZN44 842 aa4.04□□□□□ -1.76
SNX13-209ENST00000492626 NIM1KQ8IY84 436 aa4.04□□□□□ -1.76
SNX13-209ENST00000492626 ARHGEF10O15013 1369 aa4.04□□□□□ -1.76
SNX13-209ENST00000492626 ANKRD30BQ9BXX2 1392 aa4.04□□□□□ -1.76
SNX13-209ENST00000492626 SUSD5O60279 629 aa4.04□□□□□ -1.76
SNX13-209ENST00000492626 LIG1P18858 919 aa4.04□□□□□ -1.76
SNX13-209ENST00000492626 INTS3Q68E01 1043 aaKnown RBP4.04□□□□□ -1.76
SNX13-209ENST00000492626 KANK3Q6NY19 840 aa4.04□□□□□ -1.76
SNX13-209ENST00000492626 SGSM3Q96HU1 749 aa4.04□□□□□ -1.76
SNX13-209ENST00000492626 LPIN3Q9BQK8 851 aa4.04□□□□□ -1.76
SNX13-209ENST00000492626 DDX56Q9NY93 547 aaKnown RBP4.04□□□□□ -1.76
SNX13-209ENST00000492626 C1orf167Q5SNV9 1468 aa4.03□□□□□ -1.76
SNX13-209ENST00000492626 LMO7Q8WWI1 1683 aa4.03□□□□□ -1.76
SNX13-209ENST00000492626 SPDYE3A6NKU9 549 aa4.03□□□□□ -1.76
SNX13-209ENST00000492626 ALG1L2C9J202 215 aa4.03□□□□□ -1.76
SNX13-209ENST00000492626 FSCN2O14926 492 aa4.03□□□□□ -1.76
SNX13-209ENST00000492626 NME1P15531 152 aaKnown RBP4.03□□□□□ -1.76
SNX13-209ENST00000492626 MASP1P48740 699 aa4.03□□□□□ -1.76
SNX13-209ENST00000492626 NLRP12P59046 1061 aa4.03□□□□□ -1.76
SNX13-209ENST00000492626 SUZ12Q15022 739 aaKnown RBP4.03□□□□□ -1.76
SNX13-209ENST00000492626 TAB3Q8N5C8 712 aaPredicted RBP4.03□□□□□ -1.76
SNX13-209ENST00000492626 ZNF507Q8TCN5 953 aa4.03□□□□□ -1.76
SNX13-209ENST00000492626 STK35Q8TDR2 534 aa4.03□□□□□ -1.76
SNX13-209ENST00000492626 TYW1Q9NV66 732 aaKnown RBP4.03□□□□□ -1.76
SNX13-209ENST00000492626 POLR3KQ9Y2Y1 108 aaPredicted RBP4.03□□□□□ -1.76
SNX13-209ENST00000492626 CSADQ9Y600 493 aa4.03□□□□□ -1.76
SNX13-209ENST00000492626 CLTCL1P53675 1640 aa4.03□□□□□ -1.76
SNX13-209ENST00000492626 TRAV20A0A0B4J274 112 aa4.03□□□□□ -1.76
SNX13-209ENST00000492626 MEIS3P2A8K0S8 358 aa4.03□□□□□ -1.76
SNX13-209ENST00000492626 ADARB2-AS1A8MUL3 147 aa4.03□□□□□ -1.76
SNX13-209ENST00000492626 AKAP4Q5JQC9 854 aa4.03□□□□□ -1.76
SNX13-209ENST00000492626 TXNDC11Q6PKC3 985 aa4.03□□□□□ -1.76
SNX13-209ENST00000492626 SPATC1Q76KD6 591 aa4.03□□□□□ -1.76
SNX13-209ENST00000492626 CAAP1Q9H8G2 361 aa4.03□□□□□ -1.76
SNX13-209ENST00000492626 ADAM30Q9UKF2 790 aa4.03□□□□□ -1.76
SNX13-209ENST00000492626 AP4E1Q9UPM8 1137 aa4.03□□□□□ -1.76
SNX13-209ENST00000492626 CLEC3AO75596 197 aa4.03□□□□□ -1.77
SNX13-209ENST00000492626 GRK4P32298 578 aa4.03□□□□□ -1.77
SNX13-209ENST00000492626 FLT3P36888 993 aa4.03□□□□□ -1.77
SNX13-209ENST00000492626 CCNFP41002 786 aa4.03□□□□□ -1.77
SNX13-209ENST00000492626 ZNF143P52747 638 aaPredicted RBP4.03□□□□□ -1.77
SNX13-209ENST00000492626 NFKB2Q00653 900 aa4.03□□□□□ -1.77
SNX13-209ENST00000492626 C21orf62-AS1Q17RA5 79 aa4.03□□□□□ -1.77
SNX13-209ENST00000492626 ODR4Q5SWX8 454 aa4.03□□□□□ -1.77
SNX13-209ENST00000492626 POMZP3Q6PJE2 187 aa4.03□□□□□ -1.77
SNX13-209ENST00000492626 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.03□□□□□ -1.77
SNX13-209ENST00000492626 HID1Q8IV36 788 aa4.03□□□□□ -1.77
SNX13-209ENST00000492626 DHX37Q8IY37 1157 aaKnown RBP4.03□□□□□ -1.77
SNX13-209ENST00000492626 CCDC144CPQ8IYA2 1237 aa4.03□□□□□ -1.77
SNX13-209ENST00000492626 JDP2Q8WYK2 163 aa4.03□□□□□ -1.77
SNX13-209ENST00000492626 CCDC74BQ96LY2 380 aa4.03□□□□□ -1.77
SNX13-209ENST00000492626 SLC52A1Q9NWF4 448 aa4.03□□□□□ -1.77
SNX13-209ENST00000492626 CD2APQ9Y5K6 639 aa4.03□□□□□ -1.77
SNX13-209ENST00000492626 CORINQ9Y5Q5 1042 aa4.03□□□□□ -1.77
SNX13-209ENST00000492626 ST8SIA5O15466 376 aa4.02□□□□□ -1.77
SNX13-209ENST00000492626 DIAPH1O60610 1272 aaKnown RBP4.02□□□□□ -1.77
SNX13-209ENST00000492626 PPM1BO75688 479 aa4.02□□□□□ -1.77
SNX13-209ENST00000492626 SQSTM1Q13501 440 aa4.02□□□□□ -1.77
SNX13-209ENST00000492626 UBAP2LQ14157 1087 aaKnown RBP4.02□□□□□ -1.77
SNX13-209ENST00000492626 AHI1Q8N157 1196 aa4.02□□□□□ -1.77
SNX13-209ENST00000492626 ZBTB38Q8NAP3 1195 aaPredicted RBP4.02□□□□□ -1.77
SNX13-209ENST00000492626 SMARCC1Q92922 1105 aaPredicted RBP4.02□□□□□ -1.77
SNX13-209ENST00000492626 ATG4CQ96DT6 458 aa4.02□□□□□ -1.77
SNX13-209ENST00000492626 ATXN3LQ9H3M9 355 aa4.02□□□□□ -1.77
SNX13-209ENST00000492626 OVOS2A0A0G2JMS6 1433 aa4.02□□□□□ -1.77
SNX13-209ENST00000492626 RNGTTO60942 597 aaKnown RBP4.02□□□□□ -1.77
SNX13-209ENST00000492626 ADAMTSL4Q6UY14 1074 aa4.02□□□□□ -1.77
SNX13-209ENST00000492626 C12orf40Q86WS4 652 aa4.02□□□□□ -1.77
SNX13-209ENST00000492626 TRIM47Q96LD4 638 aa4.02□□□□□ -1.77
SNX13-209ENST00000492626 IRF2BPLQ9H1B7 796 aa4.02□□□□□ -1.77
SNX13-209ENST00000492626 ANTXR1Q9H6X2 564 aa4.02□□□□□ -1.77
SNX13-209ENST00000492626 FAM86C1Q9NVL1 165 aa4.02□□□□□ -1.77
SNX13-209ENST00000492626 FANCGO15287 622 aa4.02□□□□□ -1.77
SNX13-209ENST00000492626 PPFIA3O75145 1194 aa4.02□□□□□ -1.77
SNX13-209ENST00000492626 RAC1P63000 192 aa4.02□□□□□ -1.77
SNX13-209ENST00000492626 PTPN11Q06124 597 aaPredicted RBP4.02□□□□□ -1.77
SNX13-209ENST00000492626 SLC10A6Q3KNW5 377 aa4.02□□□□□ -1.77
SNX13-209ENST00000492626 NOL9Q5SY16 702 aaKnown RBP4.02□□□□□ -1.77
SNX13-209ENST00000492626 CNNM4Q6P4Q7 775 aa4.02□□□□□ -1.77
SNX13-209ENST00000492626 LRFN4Q6PJG9 635 aa4.02□□□□□ -1.77
SNX13-209ENST00000492626 RUSC1Q9BVN2 902 aa4.02□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms