RNA–Protein interactions for RNA: ENST00000492606.1

UBR4-215, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-215ENST00000492606 KCNA5P22460 613 aa5.54□□□□□ -1.52
UBR4-215ENST00000492606 RAB30Q15771 203 aa5.54□□□□□ -1.52
UBR4-215ENST00000492606 TRIM60Q495X7 471 aa5.54□□□□□ -1.52
UBR4-215ENST00000492606 MAP3K21Q5TCX8 1036 aa5.54□□□□□ -1.52
UBR4-215ENST00000492606 ZNF530Q6P9A1 599 aaPredicted RBP5.54□□□□□ -1.52
UBR4-215ENST00000492606 APOBEC3FQ8IUX4 373 aaKnown RBP5.54□□□□□ -1.52
UBR4-215ENST00000492606 DCLK2Q8N568 766 aa5.54□□□□□ -1.52
UBR4-215ENST00000492606 SCG3Q8WXD2 468 aaKnown RBP5.54□□□□□ -1.52
UBR4-215ENST00000492606 RUNDC1Q96C34 613 aa5.54□□□□□ -1.52
UBR4-215ENST00000492606 SAP130Q9H0E3 1048 aa5.54□□□□□ -1.52
UBR4-215ENST00000492606 CERS4Q9HA82 394 aa5.54□□□□□ -1.52
UBR4-215ENST00000492606 BSDC1Q9NW68 430 aaPredicted RBP5.54□□□□□ -1.52
UBR4-215ENST00000492606 SCHIP1Q9P0W5 487 aaPredicted RBP5.54□□□□□ -1.52
UBR4-215ENST00000492606 POLLQ9UGP5 575 aa5.54□□□□□ -1.52
UBR4-215ENST00000492606 SERTAD1Q9UHV2 236 aa5.54□□□□□ -1.52
UBR4-215ENST00000492606 DMXL2Q8TDJ6 3036 aa5.54□□□□□ -1.52
UBR4-215ENST00000492606 UBR2Q8IWV8 1755 aa5.54□□□□□ -1.52
UBR4-215ENST00000492606 DNHD1Q96M86 4753 aa5.54□□□□□ -1.52
UBR4-215ENST00000492606 RBM47A0AV96 593 aaKnown RBP5.53□□□□□ -1.52
UBR4-215ENST00000492606 PDHXO00330 501 aa5.53□□□□□ -1.52
UBR4-215ENST00000492606 GDF9O60383 454 aa5.53□□□□□ -1.52
UBR4-215ENST00000492606 PIP4K2AP48426 406 aaPredicted RBP5.53□□□□□ -1.52
UBR4-215ENST00000492606 FPGSQ05932 587 aa5.53□□□□□ -1.52
UBR4-215ENST00000492606 CBLBQ13191 982 aa5.53□□□□□ -1.52
UBR4-215ENST00000492606 FAM26DQ5JW98 314 aa5.53□□□□□ -1.52
UBR4-215ENST00000492606 MCTP2Q6DN12 878 aa5.53□□□□□ -1.52
UBR4-215ENST00000492606 Q6ZVU0 165 aa5.53□□□□□ -1.52
UBR4-215ENST00000492606 ZNF598Q86UK7 904 aaKnown RBP5.53□□□□□ -1.52
UBR4-215ENST00000492606 NPAS4Q8IUM7 802 aa5.53□□□□□ -1.52
UBR4-215ENST00000492606 C2orf49Q9BVC5 232 aaPredicted RBP5.53□□□□□ -1.52
UBR4-215ENST00000492606 MXD3Q9BW11 206 aa5.53□□□□□ -1.52
UBR4-215ENST00000492606 LSM14BQ9BX40 385 aaKnown RBP5.53□□□□□ -1.52
UBR4-215ENST00000492606 RAB6BQ9NRW1 208 aa5.53□□□□□ -1.52
UBR4-215ENST00000492606 KCNK4Q9NYG8 393 aa5.53□□□□□ -1.52
UBR4-215ENST00000492606 RBM19Q9Y4C8 960 aaKnown RBP5.53□□□□□ -1.52
UBR4-215ENST00000492606 LRRC37AA6NMS7 1700 aa5.52□□□□□ -1.53
UBR4-215ENST00000492606 A6NJY4 79 aa5.52□□□□□ -1.53
UBR4-215ENST00000492606 ABL1P00519 1130 aa5.52□□□□□ -1.53
UBR4-215ENST00000492606 PDGFBP01127 241 aaPredicted RBP5.52□□□□□ -1.53
UBR4-215ENST00000492606 CYP2C8P10632 490 aa5.52□□□□□ -1.53
UBR4-215ENST00000492606 CCND3P30281 292 aaPredicted RBP5.52□□□□□ -1.53
UBR4-215ENST00000492606 RBM25P49756 843 aaKnown RBP5.52□□□□□ -1.53
UBR4-215ENST00000492606 RABGGTBP53611 331 aa5.52□□□□□ -1.53
UBR4-215ENST00000492606 SMTNP53814 917 aa5.52□□□□□ -1.53
UBR4-215ENST00000492606 SRSF1Q07955 248 aaKnown RBP eCLIP5.52□□□□□ -1.53
UBR4-215ENST00000492606 NNTQ13423 1086 aa5.52□□□□□ -1.53
UBR4-215ENST00000492606 VGLL4Q14135 290 aa5.52□□□□□ -1.53
UBR4-215ENST00000492606 NAA30Q147X3 362 aaPredicted RBP5.52□□□□□ -1.53
UBR4-215ENST00000492606 HLFQ16534 295 aa5.52□□□□□ -1.53
UBR4-215ENST00000492606 TBCELQ5QJ74 424 aa5.52□□□□□ -1.53
UBR4-215ENST00000492606 TMEM240Q5SV17 173 aa5.52□□□□□ -1.53
UBR4-215ENST00000492606 SLC39A5Q6ZMH5 540 aa5.52□□□□□ -1.53
UBR4-215ENST00000492606 CYP2U1Q7Z449 544 aa5.52□□□□□ -1.53
UBR4-215ENST00000492606 STAG2Q8N3U4 1231 aa5.52□□□□□ -1.53
UBR4-215ENST00000492606 TRIB2Q92519 343 aa5.52□□□□□ -1.53
UBR4-215ENST00000492606 ZBED3Q96IU2 234 aaPredicted RBP5.52□□□□□ -1.53
UBR4-215ENST00000492606 BBC3Q96PG8 261 aaPredicted RBP5.52□□□□□ -1.53
UBR4-215ENST00000492606 SLC12A5Q9H2X9 1139 aa5.52□□□□□ -1.53
UBR4-215ENST00000492606 ARHGEF10LQ9HCE6 1279 aa5.52□□□□□ -1.53
UBR4-215ENST00000492606 PLXNB2O15031 1838 aa5.52□□□□□ -1.53
UBR4-215ENST00000492606 RALGAPA2Q2PPJ7 1873 aa5.51□□□□□ -1.53
UBR4-215ENST00000492606 POLQO75417 2590 aa5.51□□□□□ -1.53
UBR4-215ENST00000492606 AKAP13Q12802 2813 aa5.51□□□□□ -1.53
UBR4-215ENST00000492606 H3BRB1 525 aa5.51□□□□□ -1.53
UBR4-215ENST00000492606 J3QL48 77 aa5.51□□□□□ -1.53
UBR4-215ENST00000492606 TNFRSF10BO14763 440 aa5.51□□□□□ -1.53
UBR4-215ENST00000492606 BACH1O14867 736 aa5.51□□□□□ -1.53
UBR4-215ENST00000492606 LPXNO60711 386 aa5.51□□□□□ -1.53
UBR4-215ENST00000492606 BBOX1O75936 387 aa5.51□□□□□ -1.53
UBR4-215ENST00000492606 TNNT2P45379 298 aaPredicted RBP5.51□□□□□ -1.53
UBR4-215ENST00000492606 MARSP56192 900 aaKnown RBP5.51□□□□□ -1.53
UBR4-215ENST00000492606 SH3PXD2AQ5TCZ1 1133 aa5.51□□□□□ -1.53
UBR4-215ENST00000492606 ANKRD23Q86SG2 305 aa5.51□□□□□ -1.53
UBR4-215ENST00000492606 SLC9A9Q8IVB4 645 aa5.51□□□□□ -1.53
UBR4-215ENST00000492606 ADHFE1Q8IWW8 467 aa5.51□□□□□ -1.53
UBR4-215ENST00000492606 ZDHHC1Q8WTX9 485 aa5.51□□□□□ -1.53
UBR4-215ENST00000492606 ITPKCQ96DU7 683 aa5.51□□□□□ -1.53
UBR4-215ENST00000492606 MPHOSPH9Q99550 1183 aa5.51□□□□□ -1.53
UBR4-215ENST00000492606 UPF3BQ9BZI7 483 aaKnown RBP5.51□□□□□ -1.53
UBR4-215ENST00000492606 TUT1Q9H6E5 874 aaKnown RBP5.51□□□□□ -1.53
UBR4-215ENST00000492606 SLC52A2Q9HAB3 445 aa5.51□□□□□ -1.53
UBR4-215ENST00000492606 TOR4AQ9NXH8 423 aa5.51□□□□□ -1.53
UBR4-215ENST00000492606 CACNA2D2Q9NY47 1150 aa5.51□□□□□ -1.53
UBR4-215ENST00000492606 ANKFY1Q9P2R3 1169 aa5.51□□□□□ -1.53
UBR4-215ENST00000492606 LRFN2Q9ULH4 789 aa5.51□□□□□ -1.53
UBR4-215ENST00000492606 KCNH4Q9UQ05 1017 aa5.51□□□□□ -1.53
UBR4-215ENST00000492606 EMILIN1Q9Y6C2 1016 aa5.51□□□□□ -1.53
UBR4-215ENST00000492606 FREM2Q5SZK8 3169 aa5.5□□□□□ -1.53
UBR4-215ENST00000492606 SRRM3A6NNA2 597 aaPredicted RBP5.5□□□□□ -1.53
UBR4-215ENST00000492606 C1QTNF9BB2RNN3 333 aa5.5□□□□□ -1.53
UBR4-215ENST00000492606 CDK2AP1O14519 115 aa5.5□□□□□ -1.53
UBR4-215ENST00000492606 IGHA2P01877 340 aa5.5□□□□□ -1.53
UBR4-215ENST00000492606 ADH1AP07327 375 aa5.5□□□□□ -1.53
UBR4-215ENST00000492606 C1QTNF9P0C862 333 aa5.5□□□□□ -1.53
UBR4-215ENST00000492606 ZXDAP98168 799 aa5.5□□□□□ -1.53
UBR4-215ENST00000492606 TLE2Q04725 743 aa5.5□□□□□ -1.53
UBR4-215ENST00000492606 MOGSQ13724 837 aa5.5□□□□□ -1.53
UBR4-215ENST00000492606 SNX17Q15036 470 aa5.5□□□□□ -1.53
UBR4-215ENST00000492606 EPHA10Q5JZY3 1008 aa5.5□□□□□ -1.53
UBR4-215ENST00000492606 COX20Q5RI15 118 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms