RNA–Protein interactions for RNA: ENST00000491944.1

SCN5A-213, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best)

Gene SCN5A, Length 1,382 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-213ENST00000491944 CALM1P0DP23 149 aa27.1■■□□□ 1.93
SCN5A-213ENST00000491944 CALM2P0DP24 149 aa27.1■■□□□ 1.93
SCN5A-213ENST00000491944 CALM3P0DP25 149 aa27.1■■□□□ 1.93
SCN5A-213ENST00000491944 TOB2Q14106 344 aaPredicted RBP27.1■■□□□ 1.93
SCN5A-213ENST00000491944 LBX2Q6XYB7 198 aa27.1■■□□□ 1.93
SCN5A-213ENST00000491944 CCDC144CPQ8IYA2 1237 aa27.1■■□□□ 1.93
SCN5A-213ENST00000491944 CTCFLQ8NI51 663 aaPredicted RBP27.1■■□□□ 1.93
SCN5A-213ENST00000491944 CTDP1Q9Y5B0 961 aaPredicted RBP27.1■■□□□ 1.93
SCN5A-213ENST00000491944 VWA5AO00534 786 aa27.09■■□□□ 1.93
SCN5A-213ENST00000491944 ZBTB43O43298 467 aa27.09■■□□□ 1.93
SCN5A-213ENST00000491944 PEX10O60683 326 aa27.09■■□□□ 1.93
SCN5A-213ENST00000491944 BCRP11274 1271 aa27.09■■□□□ 1.93
SCN5A-213ENST00000491944 SYDE2Q5VT97 1194 aa27.09■■□□□ 1.93
SCN5A-213ENST00000491944 BTNL9Q6UXG8 535 aa27.09■■□□□ 1.93
SCN5A-213ENST00000491944 STAG2Q8N3U4 1231 aa27.09■■□□□ 1.93
SCN5A-213ENST00000491944 TXNRD2Q9NNW7 524 aa27.09■■□□□ 1.93
SCN5A-213ENST00000491944 RBPJLQ9UBG7 517 aa27.09■■□□□ 1.93
SCN5A-213ENST00000491944 MAD2L2Q9UI95 211 aa27.09■■□□□ 1.93
SCN5A-213ENST00000491944 RABGAP1Q9Y3P9 1069 aa27.09■■□□□ 1.93
SCN5A-213ENST00000491944 GOLGA8BA8MQT2 603 aa27.09■■□□□ 1.93
SCN5A-213ENST00000491944 HSPA8P11142 646 aaKnown RBP27.09■■□□□ 1.93
SCN5A-213ENST00000491944 KIF5BP33176 963 aa27.09■■□□□ 1.93
SCN5A-213ENST00000491944 CTCFP49711 727 aaPredicted RBP27.09■■□□□ 1.93
SCN5A-213ENST00000491944 FAM110CQ1W6H9 321 aa27.09■■□□□ 1.93
SCN5A-213ENST00000491944 POTEEQ6S8J3 1075 aa27.09■■□□□ 1.93
SCN5A-213ENST00000491944 MB21D1Q8N884 522 aa27.09■■□□□ 1.93
SCN5A-213ENST00000491944 MAP3K14Q99558 947 aa27.09■■□□□ 1.93
SCN5A-213ENST00000491944 LARP6Q9BRS8 491 aaKnown RBP27.09■■□□□ 1.93
SCN5A-213ENST00000491944 UBA5Q9GZZ9 404 aa27.09■■□□□ 1.93
SCN5A-213ENST00000491944 CPVLQ9H3G5 476 aa27.09■■□□□ 1.93
SCN5A-213ENST00000491944 PRR12Q9ULL5 1215 aa27.09■■□□□ 1.93
SCN5A-213ENST00000491944 PALM3A6NDB9 673 aaPredicted RBP27.08■■□□□ 1.93
SCN5A-213ENST00000491944 KLRF2D3W0D1 207 aa27.08■■□□□ 1.93
SCN5A-213ENST00000491944 ZBED4O75132 1171 aa27.08■■□□□ 1.93
SCN5A-213ENST00000491944 BTBD7Q9P203 1132 aa27.08■■□□□ 1.93
SCN5A-213ENST00000491944 MORF4L1Q9UBU8 362 aa27.08■■□□□ 1.93
SCN5A-213ENST00000491944 ADAMTS5Q9UNA0 930 aa27.08■■□□□ 1.93
SCN5A-213ENST00000491944 DHX16O60231 1041 aaKnown RBP27.07■■□□□ 1.92
SCN5A-213ENST00000491944 CNMDO75829 334 aa27.07■■□□□ 1.92
SCN5A-213ENST00000491944 ERVK-9P63128 1117 aa27.07■■□□□ 1.92
SCN5A-213ENST00000491944 ERVK-24P63145 666 aa27.07■■□□□ 1.92
SCN5A-213ENST00000491944 SP3Q02447 781 aa27.07■■□□□ 1.92
SCN5A-213ENST00000491944 PLS1Q14651 629 aa27.07■■□□□ 1.92
SCN5A-213ENST00000491944 FANCBQ8NB91 859 aa27.07■■□□□ 1.92
SCN5A-213ENST00000491944 GPRC5AQ8NFJ5 357 aa27.07■■□□□ 1.92
SCN5A-213ENST00000491944 GOLGA8AA7E2F4 631 aa27.06■■□□□ 1.92
SCN5A-213ENST00000491944 AK2P54819 239 aa27.06■■□□□ 1.92
SCN5A-213ENST00000491944 SNAP25P60880 206 aa27.06■■□□□ 1.92
SCN5A-213ENST00000491944 RABEP1Q15276 862 aa27.06■■□□□ 1.92
SCN5A-213ENST00000491944 NOM1Q5C9Z4 860 aaKnown RBP27.06■■□□□ 1.92
SCN5A-213ENST00000491944 ZNF296Q8WUU4 475 aaPredicted RBP27.06■■□□□ 1.92
SCN5A-213ENST00000491944 ALDH8A1Q9H2A2 487 aaPredicted RBP27.06■■□□□ 1.92
SCN5A-213ENST00000491944 FKTNO75072 461 aa27.05■■□□□ 1.92
SCN5A-213ENST00000491944 ECM2O94769 699 aaPredicted RBP27.05■■□□□ 1.92
SCN5A-213ENST00000491944 FDX1P10109 184 aa27.05■■□□□ 1.92
SCN5A-213ENST00000491944 LBX1P52954 281 aa27.05■■□□□ 1.92
SCN5A-213ENST00000491944 ANKRD1Q15327 319 aa27.05■■□□□ 1.92
SCN5A-213ENST00000491944 RTN1Q16799 776 aa27.05■■□□□ 1.92
SCN5A-213ENST00000491944 NOL8Q76FK4 1167 aaKnown RBP27.05■■□□□ 1.92
SCN5A-213ENST00000491944 SLC38A10Q9HBR0 1119 aa27.05■■□□□ 1.92
SCN5A-213ENST00000491944 GNAQP50148 359 aa27.04■■□□□ 1.92
SCN5A-213ENST00000491944 METAP2P50579 478 aaKnown RBP eCLIP27.04■■□□□ 1.92
SCN5A-213ENST00000491944 RCAN1P53805 252 aa27.04■■□□□ 1.92
SCN5A-213ENST00000491944 TMEM132BQ14DG7 1078 aa27.04■■□□□ 1.92
SCN5A-213ENST00000491944 CPXCR1Q8N123 301 aa27.04■■□□□ 1.92
SCN5A-213ENST00000491944 REPS2Q8NFH8 660 aa27.04■■□□□ 1.92
SCN5A-213ENST00000491944 VAT1LQ9HCJ6 419 aa27.04■■□□□ 1.92
SCN5A-213ENST00000491944 EVCP57679 992 aa27.03■■□□□ 1.92
SCN5A-213ENST00000491944 CCNA1P78396 465 aa27.03■■□□□ 1.92
SCN5A-213ENST00000491944 Q3C1V9 767 aa27.03■■□□□ 1.92
SCN5A-213ENST00000491944 CCDC174Q6PII3 467 aa27.03■■□□□ 1.92
SCN5A-213ENST00000491944 ADGRF4Q8IZF3 695 aa27.03■■□□□ 1.92
SCN5A-213ENST00000491944 SPATC1LQ9H0A9 340 aa27.03■■□□□ 1.92
SCN5A-213ENST00000491944 CASP8AP2Q9UKL3 1982 aa27.03■■□□□ 1.92
SCN5A-213ENST00000491944 PLEKHA8P1O95397 391 aa27.02■■□□□ 1.92
SCN5A-213ENST00000491944 SLC4A3P48751 1232 aa27.02■■□□□ 1.92
SCN5A-213ENST00000491944 LACTBP83111 547 aaPredicted RBP27.02■■□□□ 1.92
SCN5A-213ENST00000491944 KIF22Q14807 665 aa27.02■■□□□ 1.92
SCN5A-213ENST00000491944 CCAR1Q8IX12 1150 aaKnown RBP27.02■■□□□ 1.92
SCN5A-213ENST00000491944 LZTS2Q9BRK4 669 aa27.02■■□□□ 1.92
SCN5A-213ENST00000491944 RANBP17Q9H2T7 1088 aaKnown RBP27.02■■□□□ 1.92
SCN5A-213ENST00000491944 RAVER2Q9HCJ3 691 aaKnown RBP27.02■■□□□ 1.92
SCN5A-213ENST00000491944 RBM28Q9NW13 759 aaKnown RBP27.02■■□□□ 1.92
SCN5A-213ENST00000491944 HPS5Q9UPZ3 1129 aa27.02■■□□□ 1.92
SCN5A-213ENST00000491944 MGAMO43451 1857 aa27.02■■□□□ 1.92
SCN5A-213ENST00000491944 MYH6P13533 1939 aa27.02■■□□□ 1.92
SCN5A-213ENST00000491944 BAZ2BQ9UIF8 2168 aaKnown RBP27.02■■□□□ 1.92
SCN5A-213ENST00000491944 ZSWIM8A7E2V4 1837 aa27.01■■□□□ 1.92
SCN5A-213ENST00000491944 PDIA3P30101 505 aaKnown RBP27.01■■□□□ 1.91
SCN5A-213ENST00000491944 CD99L2Q8TCZ2 262 aa27.01■■□□□ 1.91
SCN5A-213ENST00000491944 ZNF214Q9UL59 606 aaPredicted RBP27.01■■□□□ 1.91
SCN5A-213ENST00000491944 STAT3P40763 770 aa27■■□□□ 1.91
SCN5A-213ENST00000491944 STK3Q13188 491 aa27■■□□□ 1.91
SCN5A-213ENST00000491944 SNRNP48Q6IEG0 339 aaKnown RBP27■■□□□ 1.91
SCN5A-213ENST00000491944 TMTC3Q6ZXV5 915 aa27■■□□□ 1.91
SCN5A-213ENST00000491944 NBPF11Q86T75 865 aa27■■□□□ 1.91
SCN5A-213ENST00000491944 CMTR1Q8N1G2 835 aaKnown RBP27■■□□□ 1.91
SCN5A-213ENST00000491944 ZNF274Q96GC6 653 aaPredicted RBP27■■□□□ 1.91
SCN5A-213ENST00000491944 ERO1AQ96HE7 468 aa27■■□□□ 1.91
SCN5A-213ENST00000491944 MOV10L1Q9BXT6 1211 aaKnown RBP27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms