RNA–Protein interactions for RNA: ENST00000491429.1

SCN1A-206, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 4

Gene SCN1A, Length 542 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-206ENST00000491429 KLHL14Q9P2G3 628 aa7.9□□□□□ -1.14
SCN1A-206ENST00000491429 RAG1P15918 1043 aa7.89□□□□□ -1.15
SCN1A-206ENST00000491429 CNKSR3Q6P9H4 555 aa7.89□□□□□ -1.15
SCN1A-206ENST00000491429 DBX2Q6ZNG2 339 aa7.89□□□□□ -1.15
SCN1A-206ENST00000491429 FAM129CQ86XR2 697 aa7.89□□□□□ -1.15
SCN1A-206ENST00000491429 IGDCC3Q8IVU1 814 aa7.89□□□□□ -1.15
SCN1A-206ENST00000491429 FADS2P1A8MWK0 482 aa7.88□□□□□ -1.15
SCN1A-206ENST00000491429 NFKB2Q00653 900 aa7.88□□□□□ -1.15
SCN1A-206ENST00000491429 HSF5Q4G112 596 aaPredicted RBP7.88□□□□□ -1.15
SCN1A-206ENST00000491429 FAM196AQ6ZSG2 479 aa7.88□□□□□ -1.15
SCN1A-206ENST00000491429 TMC6Q7Z403 805 aa7.88□□□□□ -1.15
SCN1A-206ENST00000491429 ZNF512BQ96KM6 892 aaPredicted RBP7.88□□□□□ -1.15
SCN1A-206ENST00000491429 FCRL2Q96LA5 508 aaPredicted RBP7.88□□□□□ -1.15
SCN1A-206ENST00000491429 PRDM14Q9GZV8 571 aa7.88□□□□□ -1.15
SCN1A-206ENST00000491429 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.88□□□□□ -1.15
SCN1A-206ENST00000491429 GPR55Q9Y2T6 319 aaPredicted RBP7.88□□□□□ -1.15
SCN1A-206ENST00000491429 ABLIM1O14639 778 aa7.87□□□□□ -1.15
SCN1A-206ENST00000491429 CELA3BP08861 270 aa7.87□□□□□ -1.15
SCN1A-206ENST00000491429 OLFML2BQ68BL8 750 aa7.87□□□□□ -1.15
SCN1A-206ENST00000491429 GGNQ86UU5 652 aa7.87□□□□□ -1.15
SCN1A-206ENST00000491429 LDHDQ86WU2 507 aa7.87□□□□□ -1.15
SCN1A-206ENST00000491429 ADAM7Q9H2U9 754 aa7.87□□□□□ -1.15
SCN1A-206ENST00000491429 BRMS1Q9HCU9 246 aa7.87□□□□□ -1.15
SCN1A-206ENST00000491429 GMIPQ9P107 970 aa7.87□□□□□ -1.15
SCN1A-206ENST00000491429 TNFRSF10DQ9UBN6 386 aa7.87□□□□□ -1.15
SCN1A-206ENST00000491429 PCDHB14Q9Y5E9 798 aa7.87□□□□□ -1.15
SCN1A-206ENST00000491429 TAF6LQ9Y6J9 622 aa7.87□□□□□ -1.15
SCN1A-206ENST00000491429 SIGLEC6O43699 453 aa7.86□□□□□ -1.15
SCN1A-206ENST00000491429 MPOP05164 745 aa7.86□□□□□ -1.15
SCN1A-206ENST00000491429 CEBPAP49715 358 aaPredicted RBP7.86□□□□□ -1.15
SCN1A-206ENST00000491429 PWP1Q13610 501 aa7.86□□□□□ -1.15
SCN1A-206ENST00000491429 MLECQ14165 292 aa7.86□□□□□ -1.15
SCN1A-206ENST00000491429 OVOS1Q6IE37 1185 aa7.86□□□□□ -1.15
SCN1A-206ENST00000491429 GALNT18Q6P9A2 607 aa7.86□□□□□ -1.15
SCN1A-206ENST00000491429 SP8Q8IXZ3 490 aa7.86□□□□□ -1.15
SCN1A-206ENST00000491429 NUDT19A8MXV4 375 aa7.85□□□□□ -1.15
SCN1A-206ENST00000491429 MEIS1O00470 390 aa7.85□□□□□ -1.15
SCN1A-206ENST00000491429 PRKCAP17252 672 aa7.85□□□□□ -1.15
SCN1A-206ENST00000491429 NCKAP1LP55160 1127 aa7.85□□□□□ -1.15
SCN1A-206ENST00000491429 RAB3GAP1Q15042 981 aa7.85□□□□□ -1.15
SCN1A-206ENST00000491429 CWF19L2Q2TBE0 894 aaKnown RBP7.85□□□□□ -1.15
SCN1A-206ENST00000491429 PWWP2AQ96N64 755 aa7.85□□□□□ -1.15
SCN1A-206ENST00000491429 CHST7Q9NS84 486 aa7.85□□□□□ -1.15
SCN1A-206ENST00000491429 KBTBD4Q9NVX7 518 aa7.85□□□□□ -1.15
SCN1A-206ENST00000491429 ERVK13-1Q9NX77 482 aa7.85□□□□□ -1.15
SCN1A-206ENST00000491429 PCDHA5Q9Y5H7 936 aa7.85□□□□□ -1.15
SCN1A-206ENST00000491429 WTIPA6NIX2 430 aaPredicted RBP7.84□□□□□ -1.15
SCN1A-206ENST00000491429 ARL4AP40617 200 aa7.84□□□□□ -1.15
SCN1A-206ENST00000491429 FBXL19Q6PCT2 694 aa7.84□□□□□ -1.15
SCN1A-206ENST00000491429 SLCO6A1Q86UG4 719 aa7.84□□□□□ -1.15
SCN1A-206ENST00000491429 LINC01356Q8N9X3 169 aa7.84□□□□□ -1.15
SCN1A-206ENST00000491429 TP53I13Q8NBR0 393 aaPredicted RBP7.84□□□□□ -1.15
SCN1A-206ENST00000491429 KRTAP17-1Q9BYP8 105 aa7.84□□□□□ -1.15
SCN1A-206ENST00000491429 LUC7LQ9NQ29 371 aaKnown RBP7.84□□□□□ -1.15
SCN1A-206ENST00000491429 COPRSQ9NQ92 184 aa7.84□□□□□ -1.15
SCN1A-206ENST00000491429 SORBS3O60504 671 aa7.83□□□□□ -1.16
SCN1A-206ENST00000491429 TAGLNQ01995 201 aaKnown RBP7.83□□□□□ -1.16
SCN1A-206ENST00000491429 CDCP2Q5VXM1 449 aa7.83□□□□□ -1.16
SCN1A-206ENST00000491429 FBXO33Q7Z6M2 555 aa7.83□□□□□ -1.16
SCN1A-206ENST00000491429 CDADC1Q9BWV3 514 aa7.83□□□□□ -1.16
SCN1A-206ENST00000491429 TNFRSF12AQ9NP84 129 aa7.83□□□□□ -1.16
SCN1A-206ENST00000491429 VTI1BQ9UEU0 232 aa7.83□□□□□ -1.16
SCN1A-206ENST00000491429 CLEC3AO75596 197 aa7.82□□□□□ -1.16
SCN1A-206ENST00000491429 ATE1O95260 518 aa7.82□□□□□ -1.16
SCN1A-206ENST00000491429 CTSKP43235 329 aa7.82□□□□□ -1.16
SCN1A-206ENST00000491429 CYP4F8P98187 520 aa7.82□□□□□ -1.16
SCN1A-206ENST00000491429 LAPTM5Q13571 262 aa7.82□□□□□ -1.16
SCN1A-206ENST00000491429 SND1Q7KZF4 910 aaKnown RBP eCLIP7.82□□□□□ -1.16
SCN1A-206ENST00000491429 NUP43Q8NFH3 380 aa7.82□□□□□ -1.16
SCN1A-206ENST00000491429 ATG4CQ96DT6 458 aa7.82□□□□□ -1.16
SCN1A-206ENST00000491429 TEPSINQ96N21 525 aa7.82□□□□□ -1.16
SCN1A-206ENST00000491429 LRRC3Q9BY71 257 aa7.82□□□□□ -1.16
SCN1A-206ENST00000491429 CNNM2Q9H8M5 875 aa7.82□□□□□ -1.16
SCN1A-206ENST00000491429 GFOD1Q9NXC2 390 aa7.82□□□□□ -1.16
SCN1A-206ENST00000491429 BUB1BO60566 1050 aaPredicted RBP7.81□□□□□ -1.16
SCN1A-206ENST00000491429 ZNF205O95201 554 aa7.81□□□□□ -1.16
SCN1A-206ENST00000491429 CRKP46108 304 aa7.81□□□□□ -1.16
SCN1A-206ENST00000491429 RAD51AP2Q09MP3 1159 aa7.81□□□□□ -1.16
SCN1A-206ENST00000491429 ERICH6BQ5W0A0 696 aa7.81□□□□□ -1.16
SCN1A-206ENST00000491429 RPTNQ6XPR3 784 aa7.81□□□□□ -1.16
SCN1A-206ENST00000491429 DNAJC14Q6Y2X3 702 aaPredicted RBP7.81□□□□□ -1.16
SCN1A-206ENST00000491429 TRAIPQ9BWF2 469 aa7.81□□□□□ -1.16
SCN1A-206ENST00000491429 KCNQ5Q9NR82 932 aa7.81□□□□□ -1.16
SCN1A-206ENST00000491429 ACSL6Q9UKU0 697 aa7.81□□□□□ -1.16
SCN1A-206ENST00000491429 ZC3H12DA2A288 527 aaKnown RBP7.8□□□□□ -1.16
SCN1A-206ENST00000491429 PATL2C9JE40 543 aaKnown RBP7.8□□□□□ -1.16
SCN1A-206ENST00000491429 ADRB1P08588 477 aa7.8□□□□□ -1.16
SCN1A-206ENST00000491429 TMEM62Q0P6H9 643 aa7.8□□□□□ -1.16
SCN1A-206ENST00000491429 CBX2Q14781 532 aaPredicted RBP7.8□□□□□ -1.16
SCN1A-206ENST00000491429 NLRC3Q7RTR2 1065 aa7.8□□□□□ -1.16
SCN1A-206ENST00000491429 ERMP1Q7Z2K6 904 aa7.8□□□□□ -1.16
SCN1A-206ENST00000491429 TMEM192Q8IY95 271 aa7.8□□□□□ -1.16
SCN1A-206ENST00000491429 TMEM52Q8NDY8 209 aa7.8□□□□□ -1.16
SCN1A-206ENST00000491429 JMJD8Q96S16 334 aa7.8□□□□□ -1.16
SCN1A-206ENST00000491429 MRS2Q9HD23 443 aa7.8□□□□□ -1.16
SCN1A-206ENST00000491429 AP5S1Q9NUS5 200 aa7.8□□□□□ -1.16
SCN1A-206ENST00000491429 IMPACTQ9P2X3 320 aa7.8□□□□□ -1.16
SCN1A-206ENST00000491429 A0A1W2PQ45 241 aaPredicted RBP7.79□□□□□ -1.16
SCN1A-206ENST00000491429 A0A1W2PQY0 241 aa7.79□□□□□ -1.16
SCN1A-206ENST00000491429 FFAR3O14843 346 aa7.79□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms