RNA–Protein interactions for RNA: ENST00000491258.1

PHC3-213, Transcript of polyhomeotic homolog 3, humanhuman

TSL 1 (best)

Gene PHC3, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC3-213ENST00000491258 GMIPQ9P107 970 aa7.49□□□□□ -1.21
PHC3-213ENST00000491258 CDR1P51861 262 aa7.48□□□□□ -1.21
PHC3-213ENST00000491258 VMACQ2NL98 169 aa7.48□□□□□ -1.21
PHC3-213ENST00000491258 RTEL1Q9NZ71 1219 aa7.48□□□□□ -1.21
PHC3-213ENST00000491258 MINPP1Q9UNW1 487 aa7.48□□□□□ -1.21
PHC3-213ENST00000491258 TAF6LQ9Y6J9 622 aa7.48□□□□□ -1.21
PHC3-213ENST00000491258 MEIS1O00470 390 aa7.47□□□□□ -1.21
PHC3-213ENST00000491258 SIGLEC6O43699 453 aa7.47□□□□□ -1.21
PHC3-213ENST00000491258 TAGLNQ01995 201 aaKnown RBP7.47□□□□□ -1.21
PHC3-213ENST00000491258 KIR3DS1Q14943 382 aa7.47□□□□□ -1.21
PHC3-213ENST00000491258 GALNT18Q6P9A2 607 aa7.47□□□□□ -1.21
PHC3-213ENST00000491258 FBXL19Q6PCT2 694 aa7.47□□□□□ -1.21
PHC3-213ENST00000491258 DNAJC14Q6Y2X3 702 aaPredicted RBP7.47□□□□□ -1.21
PHC3-213ENST00000491258 FBXO33Q7Z6M2 555 aa7.47□□□□□ -1.21
PHC3-213ENST00000491258 FCRL2Q96LA5 508 aaPredicted RBP7.47□□□□□ -1.21
PHC3-213ENST00000491258 PRDM14Q9GZV8 571 aa7.47□□□□□ -1.21
PHC3-213ENST00000491258 GPR55Q9Y2T6 319 aaPredicted RBP7.47□□□□□ -1.21
PHC3-213ENST00000491258 OTOL1A6NHN0 477 aaPredicted RBP7.46□□□□□ -1.22
PHC3-213ENST00000491258 ABLIM1O14639 778 aa7.46□□□□□ -1.22
PHC3-213ENST00000491258 CLEC3AO75596 197 aa7.46□□□□□ -1.22
PHC3-213ENST00000491258 MPOP05164 745 aa7.46□□□□□ -1.22
PHC3-213ENST00000491258 ERVFRD-1P60508 538 aa7.46□□□□□ -1.22
PHC3-213ENST00000491258 YBX1P67809 324 aaKnown RBP7.46□□□□□ -1.22
PHC3-213ENST00000491258 RAD51AP2Q09MP3 1159 aa7.46□□□□□ -1.22
PHC3-213ENST00000491258 HSF5Q4G112 596 aaPredicted RBP7.46□□□□□ -1.22
PHC3-213ENST00000491258 CNKSR3Q6P9H4 555 aa7.46□□□□□ -1.22
PHC3-213ENST00000491258 AEBP1Q8IUX7 1158 aa7.46□□□□□ -1.22
PHC3-213ENST00000491258 FEZF2Q8TBJ5 459 aa7.46□□□□□ -1.22
PHC3-213ENST00000491258 MZB1Q8WU39 189 aa7.46□□□□□ -1.22
PHC3-213ENST00000491258 XYLT2Q9H1B5 865 aa7.46□□□□□ -1.22
PHC3-213ENST00000491258 EPB41L4AQ9HCS5 686 aaPredicted RBP7.46□□□□□ -1.22
PHC3-213ENST00000491258 COPRSQ9NQ92 184 aa7.46□□□□□ -1.22
PHC3-213ENST00000491258 CHST7Q9NS84 486 aa7.46□□□□□ -1.22
PHC3-213ENST00000491258 TNFRSF10DQ9UBN6 386 aa7.46□□□□□ -1.22
PHC3-213ENST00000491258 SUPT16HQ9Y5B9 1047 aaKnown RBP7.46□□□□□ -1.22
PHC3-213ENST00000491258 ROBO2Q9HCK4 1378 aa7.46□□□□□ -1.22
PHC3-213ENST00000491258 WTIPA6NIX2 430 aaPredicted RBP7.45□□□□□ -1.22
PHC3-213ENST00000491258 FADS2P1A8MWK0 482 aa7.45□□□□□ -1.22
PHC3-213ENST00000491258 ARL4AP40617 200 aa7.45□□□□□ -1.22
PHC3-213ENST00000491258 TMC6Q7Z403 805 aa7.45□□□□□ -1.22
PHC3-213ENST00000491258 CDADC1Q9BWV3 514 aa7.45□□□□□ -1.22
PHC3-213ENST00000491258 LRRC3Q9BY71 257 aa7.45□□□□□ -1.22
PHC3-213ENST00000491258 IRS4O14654 1257 aaPredicted RBP7.44□□□□□ -1.22
PHC3-213ENST00000491258 PRKCAP17252 672 aa7.44□□□□□ -1.22
PHC3-213ENST00000491258 EIF4A3P38919 411 aaKnown RBP7.44□□□□□ -1.22
PHC3-213ENST00000491258 RAB3GAP1Q15042 981 aa7.44□□□□□ -1.22
PHC3-213ENST00000491258 CDCP2Q5VXM1 449 aa7.44□□□□□ -1.22
PHC3-213ENST00000491258 TMEFF1Q8IYR6 380 aa7.44□□□□□ -1.22
PHC3-213ENST00000491258 ZDHHC14Q8IZN3 488 aa7.44□□□□□ -1.22
PHC3-213ENST00000491258 CXorf38Q8TB03 319 aa7.44□□□□□ -1.22
PHC3-213ENST00000491258 ATG4CQ96DT6 458 aa7.44□□□□□ -1.22
PHC3-213ENST00000491258 MKRN2Q9H000 416 aaKnown RBP7.44□□□□□ -1.22
PHC3-213ENST00000491258 CNNM2Q9H8M5 875 aa7.44□□□□□ -1.22
PHC3-213ENST00000491258 KLHL14Q9P2G3 628 aa7.44□□□□□ -1.22
PHC3-213ENST00000491258 NUDT19A8MXV4 375 aa7.43□□□□□ -1.22
PHC3-213ENST00000491258 ATE1O95260 518 aa7.43□□□□□ -1.22
PHC3-213ENST00000491258 ITGAEP38570 1179 aa7.43□□□□□ -1.22
PHC3-213ENST00000491258 LAPTM5Q13571 262 aa7.43□□□□□ -1.22
PHC3-213ENST00000491258 NLRC3Q7RTR2 1065 aa7.43□□□□□ -1.22
PHC3-213ENST00000491258 ERMP1Q7Z2K6 904 aa7.43□□□□□ -1.22
PHC3-213ENST00000491258 LDHDQ86WU2 507 aa7.43□□□□□ -1.22
PHC3-213ENST00000491258 NUP43Q8NFH3 380 aa7.43□□□□□ -1.22
PHC3-213ENST00000491258 GFOD1Q9NXC2 390 aa7.43□□□□□ -1.22
PHC3-213ENST00000491258 FBXL21Q9UKT6 434 aa7.43□□□□□ -1.22
PHC3-213ENST00000491258 ENDOUP21128 410 aaKnown RBP7.42□□□□□ -1.22
PHC3-213ENST00000491258 CRKP46108 304 aa7.42□□□□□ -1.22
PHC3-213ENST00000491258 CYP4F8P98187 520 aa7.42□□□□□ -1.22
PHC3-213ENST00000491258 TMEM62Q0P6H9 643 aa7.42□□□□□ -1.22
PHC3-213ENST00000491258 GK5Q6ZS86 529 aa7.42□□□□□ -1.22
PHC3-213ENST00000491258 FAM129CQ86XR2 697 aa7.42□□□□□ -1.22
PHC3-213ENST00000491258 SP8Q8IXZ3 490 aa7.42□□□□□ -1.22
PHC3-213ENST00000491258 KCNQ5Q9NR82 932 aa7.42□□□□□ -1.22
PHC3-213ENST00000491258 ERVK13-1Q9NX77 482 aa7.42□□□□□ -1.22
PHC3-213ENST00000491258 PCDHB12Q9Y5F1 795 aa7.42□□□□□ -1.22
PHC3-213ENST00000491258 GREM1O60565 184 aa7.41□□□□□ -1.22
PHC3-213ENST00000491258 CLCQ05315 142 aa7.41□□□□□ -1.22
PHC3-213ENST00000491258 SEZ6Q53EL9 994 aa7.41□□□□□ -1.22
PHC3-213ENST00000491258 ERICH6BQ5W0A0 696 aa7.41□□□□□ -1.22
PHC3-213ENST00000491258 SLCO6A1Q86UG4 719 aa7.41□□□□□ -1.22
PHC3-213ENST00000491258 IGDCC3Q8IVU1 814 aa7.41□□□□□ -1.22
PHC3-213ENST00000491258 SYT8Q8NBV8 401 aa7.41□□□□□ -1.22
PHC3-213ENST00000491258 ZNF296Q8WUU4 475 aaPredicted RBP7.41□□□□□ -1.22
PHC3-213ENST00000491258 PWWP2AQ96N64 755 aa7.41□□□□□ -1.22
PHC3-213ENST00000491258 EHMT1Q9H9B1 1298 aa7.41□□□□□ -1.22
PHC3-213ENST00000491258 ZNF205O95201 554 aa7.4□□□□□ -1.22
PHC3-213ENST00000491258 CELA3BP08861 270 aa7.4□□□□□ -1.22
PHC3-213ENST00000491258 MCM4P33991 863 aa7.4□□□□□ -1.22
PHC3-213ENST00000491258 BMP8BP34820 402 aa7.4□□□□□ -1.22
PHC3-213ENST00000491258 CCNFP41002 786 aa7.4□□□□□ -1.22
PHC3-213ENST00000491258 NCKAP1LP55160 1127 aa7.4□□□□□ -1.22
PHC3-213ENST00000491258 SKOR2Q2VWA4 1001 aaPredicted RBP7.4□□□□□ -1.22
PHC3-213ENST00000491258 CRTC3Q6UUV7 619 aa7.4□□□□□ -1.22
PHC3-213ENST00000491258 PRRT2Q7Z6L0 340 aaPredicted RBP7.4□□□□□ -1.22
PHC3-213ENST00000491258 TMEM192Q8IY95 271 aa7.4□□□□□ -1.22
PHC3-213ENST00000491258 IMPACTQ9P2X3 320 aa7.4□□□□□ -1.22
PHC3-213ENST00000491258 A0A1W2PQ45 241 aaPredicted RBP7.39□□□□□ -1.23
PHC3-213ENST00000491258 A0A1W2PQY0 241 aa7.39□□□□□ -1.23
PHC3-213ENST00000491258 CTSKP43235 329 aa7.39□□□□□ -1.23
PHC3-213ENST00000491258 SLC6A18Q96N87 628 aa7.39□□□□□ -1.23
PHC3-213ENST00000491258 ANTXR1Q9H6X2 564 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms