RNA–Protein interactions for RNA: ENST00000491062.5

FXR1-220, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2 BASIC

Gene FXR1, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-220ENST00000491062 EPSTI1Q96J88 318 aa13.9□□□□□ -0.18
FXR1-220ENST00000491062 RIOK1Q9BRS2 568 aaKnown RBP13.9□□□□□ -0.18
FXR1-220ENST00000491062 BRMS1Q9HCU9 246 aa13.9□□□□□ -0.18
FXR1-220ENST00000491062 ARFGAP3Q9NP61 516 aa13.9□□□□□ -0.18
FXR1-220ENST00000491062 CNTNAP5Q8WYK1 1306 aa13.89□□□□□ -0.19
FXR1-220ENST00000491062 TUBB4BP68371 445 aa13.89□□□□□ -0.19
FXR1-220ENST00000491062 TTC38Q5R3I4 469 aa13.89□□□□□ -0.19
FXR1-220ENST00000491062 TMTC3Q6ZXV5 915 aa13.89□□□□□ -0.19
FXR1-220ENST00000491062 SRGAP1Q7Z6B7 1085 aa13.89□□□□□ -0.19
FXR1-220ENST00000491062 CATIPQ7Z7H3 387 aa13.89□□□□□ -0.19
FXR1-220ENST00000491062 ADGRA1Q86SQ6 560 aa13.89□□□□□ -0.19
FXR1-220ENST00000491062 PARD6BQ9BYG5 372 aa13.89□□□□□ -0.19
FXR1-220ENST00000491062 CALCOCO1Q9P1Z2 691 aa13.89□□□□□ -0.19
FXR1-220ENST00000491062 LIMA1Q9UHB6 759 aaKnown RBP13.89□□□□□ -0.19
FXR1-220ENST00000491062 KIAA1551Q9HCM1 1747 aa13.89□□□□□ -0.19
FXR1-220ENST00000491062 XDHP47989 1333 aa13.89□□□□□ -0.19
FXR1-220ENST00000491062 KIF5CO60282 957 aa13.88□□□□□ -0.19
FXR1-220ENST00000491062 NTSR2O95665 410 aa13.88□□□□□ -0.19
FXR1-220ENST00000491062 AFMP43652 599 aa13.88□□□□□ -0.19
FXR1-220ENST00000491062 TRAPPC10P48553 1259 aa13.88□□□□□ -0.19
FXR1-220ENST00000491062 CHRNDQ07001 517 aa13.88□□□□□ -0.19
FXR1-220ENST00000491062 TRIM14Q14142 442 aa13.88□□□□□ -0.19
FXR1-220ENST00000491062 CEP112Q8N8E3 955 aa13.88□□□□□ -0.19
FXR1-220ENST00000491062 CERKQ8TCT0 537 aa13.88□□□□□ -0.19
FXR1-220ENST00000491062 SDR42E1Q8WUS8 393 aa13.88□□□□□ -0.19
FXR1-220ENST00000491062 CDC5LQ99459 802 aaKnown RBP13.88□□□□□ -0.19
FXR1-220ENST00000491062 CDC23Q9UJX2 597 aa13.88□□□□□ -0.19
FXR1-220ENST00000491062 TTF2Q9UNY4 1162 aaKnown RBP13.88□□□□□ -0.19
FXR1-220ENST00000491062 MINDY4BA8MYZ0 360 aa13.88□□□□□ -0.19
FXR1-220ENST00000491062 WNT7AO00755 349 aa13.88□□□□□ -0.19
FXR1-220ENST00000491062 CAMTA2O94983 1202 aa13.88□□□□□ -0.19
FXR1-220ENST00000491062 PLEKHA8P1O95397 391 aa13.88□□□□□ -0.19
FXR1-220ENST00000491062 GYPCP04921 128 aa13.88□□□□□ -0.19
FXR1-220ENST00000491062 CHMP4BP1P59074 171 aa13.88□□□□□ -0.19
FXR1-220ENST00000491062 SPAG1Q07617 926 aa13.88□□□□□ -0.19
FXR1-220ENST00000491062 TROAPQ12815 778 aa13.88□□□□□ -0.19
FXR1-220ENST00000491062 PROX2Q3B8N5 592 aa13.88□□□□□ -0.19
FXR1-220ENST00000491062 IFIT1BQ5T764 474 aaKnown RBP13.88□□□□□ -0.19
FXR1-220ENST00000491062 KLHL10Q6JEL2 608 aa13.88□□□□□ -0.19
FXR1-220ENST00000491062 INTS5Q6P9B9 1019 aaKnown RBP13.88□□□□□ -0.19
FXR1-220ENST00000491062 MSL3Q8N5Y2 521 aaKnown RBP13.88□□□□□ -0.19
FXR1-220ENST00000491062 HNRNPLLQ8WVV9 542 aaKnown RBP13.88□□□□□ -0.19
FXR1-220ENST00000491062 FUT8Q9BYC5 575 aa13.88□□□□□ -0.19
FXR1-220ENST00000491062 EPC1Q9H2F5 836 aa13.88□□□□□ -0.19
FXR1-220ENST00000491062 CCDC87Q9NVE4 849 aa13.88□□□□□ -0.19
FXR1-220ENST00000491062 RWDD2AQ9UIY3 292 aa13.88□□□□□ -0.19
FXR1-220ENST00000491062 COL16A1Q07092 1604 aaPredicted RBP13.88□□□□□ -0.19
FXR1-220ENST00000491062 STRCQ7RTU9 1775 aa13.87□□□□□ -0.19
FXR1-220ENST00000491062 LRRC10BA6NIK2 292 aa13.87□□□□□ -0.19
FXR1-220ENST00000491062 IRF6O14896 467 aa13.87□□□□□ -0.19
FXR1-220ENST00000491062 OAS2P29728 719 aaKnown RBP13.87□□□□□ -0.19
FXR1-220ENST00000491062 STX17P56962 302 aa13.87□□□□□ -0.19
FXR1-220ENST00000491062 PDXDC2PQ6P474 469 aa13.87□□□□□ -0.19
FXR1-220ENST00000491062 IQCA1Q86XH1 822 aa13.87□□□□□ -0.19
FXR1-220ENST00000491062 TMTC1Q8IUR5 882 aa13.87□□□□□ -0.19
FXR1-220ENST00000491062 MSANTD4Q8NCY6 345 aa13.87□□□□□ -0.19
FXR1-220ENST00000491062 MYO1AQ9UBC5 1043 aa13.87□□□□□ -0.19
FXR1-220ENST00000491062 RAB21Q9UL25 225 aa13.87□□□□□ -0.19
FXR1-220ENST00000491062 CTNND2Q9UQB3 1225 aa13.87□□□□□ -0.19
FXR1-220ENST00000491062 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.87□□□□□ -0.19
FXR1-220ENST00000491062 MYH8P13535 1937 aa13.87□□□□□ -0.19
FXR1-220ENST00000491062 MAP2K7O14733 419 aa13.86□□□□□ -0.19
FXR1-220ENST00000491062 PRDM1O75626 825 aa13.86□□□□□ -0.19
FXR1-220ENST00000491062 USP5P45974 858 aa13.86□□□□□ -0.19
FXR1-220ENST00000491062 PRSS12P56730 875 aa13.86□□□□□ -0.19
FXR1-220ENST00000491062 SMC1AQ14683 1233 aaKnown RBP13.86□□□□□ -0.19
FXR1-220ENST00000491062 TMED8Q6PL24 325 aaPredicted RBP13.86□□□□□ -0.19
FXR1-220ENST00000491062 ZNF687Q8N1G0 1237 aa13.86□□□□□ -0.19
FXR1-220ENST00000491062 IQUBQ8NA54 791 aa13.86□□□□□ -0.19
FXR1-220ENST00000491062 GNL3LQ9NVN8 582 aaKnown RBP13.86□□□□□ -0.19
FXR1-220ENST00000491062 BTG4Q9NY30 223 aa13.86□□□□□ -0.19
FXR1-220ENST00000491062 FAM198AQ9UFP1 575 aa13.86□□□□□ -0.19
FXR1-220ENST00000491062 V9GY48 417 aaPredicted RBP13.86□□□□□ -0.19
FXR1-220ENST00000491062 COL5A3P25940 1745 aaPredicted RBP13.86□□□□□ -0.19
FXR1-220ENST00000491062 ORC4O43929 436 aa13.86□□□□□ -0.19
FXR1-220ENST00000491062 CASP1P29466 404 aa13.86□□□□□ -0.19
FXR1-220ENST00000491062 CASP14P31944 242 aa13.86□□□□□ -0.19
FXR1-220ENST00000491062 FXR1P51114 621 aaKnown RBP eCLIP13.86□□□□□ -0.19
FXR1-220ENST00000491062 KRT31Q15323 416 aa13.86□□□□□ -0.19
FXR1-220ENST00000491062 LONRF2Q1L5Z9 754 aa13.86□□□□□ -0.19
FXR1-220ENST00000491062 DMRTA1Q5VZB9 504 aa13.86□□□□□ -0.19
FXR1-220ENST00000491062 SMYD4Q8IYR2 804 aaPredicted RBP13.86□□□□□ -0.19
FXR1-220ENST00000491062 IRX2Q9BZI1 471 aaPredicted RBP13.86□□□□□ -0.19
FXR1-220ENST00000491062 LZTFL1Q9NQ48 299 aa13.86□□□□□ -0.19
FXR1-220ENST00000491062 IQSEC3Q9UPP2 1182 aaPredicted RBP13.86□□□□□ -0.19
FXR1-220ENST00000491062 COPB1P53618 953 aaKnown RBP13.85□□□□□ -0.19
FXR1-220ENST00000491062 PAK1Q13153 545 aa13.85□□□□□ -0.19
FXR1-220ENST00000491062 UBE4AQ14139 1066 aa13.85□□□□□ -0.19
FXR1-220ENST00000491062 ZNF174Q15697 407 aa13.85□□□□□ -0.19
FXR1-220ENST00000491062 TXLNBQ8N3L3 684 aa13.85□□□□□ -0.19
FXR1-220ENST00000491062 ANKZF1Q9H8Y5 726 aa13.85□□□□□ -0.19
FXR1-220ENST00000491062 ABHD10Q9NUJ1 306 aa13.85□□□□□ -0.19
FXR1-220ENST00000491062 RMND1Q9NWS8 449 aa13.85□□□□□ -0.19
FXR1-220ENST00000491062 MYH14Q7Z406 1995 aaKnown RBP13.85□□□□□ -0.19
FXR1-220ENST00000491062 PDS5AQ29RF7 1337 aaKnown RBP13.84□□□□□ -0.19
FXR1-220ENST00000491062 CTAGE9A4FU28 777 aa13.84□□□□□ -0.19
FXR1-220ENST00000491062 ERICH4A6NGS2 130 aa13.84□□□□□ -0.19
FXR1-220ENST00000491062 SMIM22K7EJ46 135 aa13.84□□□□□ -0.19
FXR1-220ENST00000491062 ARHGAP33O14559 1287 aa13.84□□□□□ -0.19
FXR1-220ENST00000491062 ERVK-24P63145 666 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms