RNA–Protein interactions for RNA: ENST00000491060.1

TRAIP-211, Transcript of TRAF interacting protein, humanhuman

TSL 3

Gene TRAIP, Length 1,046 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-211ENST00000491060 EVI5O60447 810 aa16.1■□□□□ 0.17
TRAIP-211ENST00000491060 KCTD2Q14681 263 aa16.1■□□□□ 0.17
TRAIP-211ENST00000491060 CHRDL2Q6WN34 429 aa16.1■□□□□ 0.17
TRAIP-211ENST00000491060 SHCBP1Q8NEM2 672 aa16.1■□□□□ 0.17
TRAIP-211ENST00000491060 NBPF3Q9H094 633 aa16.1■□□□□ 0.17
TRAIP-211ENST00000491060 C11orf49Q9H6J7 331 aa16.1■□□□□ 0.17
TRAIP-211ENST00000491060 GPCPD1Q9NPB8 672 aa16.1■□□□□ 0.17
TRAIP-211ENST00000491060 ZMYND8Q9ULU4 1186 aaPredicted RBP16.1■□□□□ 0.17
TRAIP-211ENST00000491060 SMCHD1A6NHR9 2005 aa16.1■□□□□ 0.17
TRAIP-211ENST00000491060 ZNF236Q9UL36 1845 aa16.1■□□□□ 0.17
TRAIP-211ENST00000491060 MKI67P46013 3256 aaKnown RBP16.09■□□□□ 0.17
TRAIP-211ENST00000491060 GSPT1P15170 499 aaKnown RBP16.09■□□□□ 0.17
TRAIP-211ENST00000491060 SYN1P17600 705 aa16.09■□□□□ 0.17
TRAIP-211ENST00000491060 SLC1A4P43007 532 aa16.09■□□□□ 0.17
TRAIP-211ENST00000491060 MAP3K21Q5TCX8 1036 aa16.09■□□□□ 0.17
TRAIP-211ENST00000491060 UBE2Q1Q7Z7E8 422 aa16.09■□□□□ 0.17
TRAIP-211ENST00000491060 RIOX2Q8IUF8 465 aa16.09■□□□□ 0.17
TRAIP-211ENST00000491060 REPS2Q8NFH8 660 aa16.09■□□□□ 0.17
TRAIP-211ENST00000491060 IL25Q9H293 177 aa16.09■□□□□ 0.17
TRAIP-211ENST00000491060 OSBPL3Q9H4L5 887 aa16.09■□□□□ 0.17
TRAIP-211ENST00000491060 FEM1BQ9UK73 627 aa16.09■□□□□ 0.17
TRAIP-211ENST00000491060 ZNF214Q9UL59 606 aaPredicted RBP16.09■□□□□ 0.17
TRAIP-211ENST00000491060 COLQQ9Y215 455 aaPredicted RBP16.09■□□□□ 0.17
TRAIP-211ENST00000491060 NEDD4P46934 1319 aa16.09■□□□□ 0.17
TRAIP-211ENST00000491060 PLIN4Q96Q06 1357 aa16.09■□□□□ 0.17
TRAIP-211ENST00000491060 SLC25A27O95847 323 aa16.08■□□□□ 0.16
TRAIP-211ENST00000491060 SLC16A2P36021 539 aa16.08■□□□□ 0.16
TRAIP-211ENST00000491060 ALX1Q15699 326 aa16.08■□□□□ 0.16
TRAIP-211ENST00000491060 GJC2Q5T442 439 aaPredicted RBP16.08■□□□□ 0.16
TRAIP-211ENST00000491060 TTC22Q5TAA0 569 aa16.08■□□□□ 0.16
TRAIP-211ENST00000491060 TTBK2Q6IQ55 1244 aa16.08■□□□□ 0.16
TRAIP-211ENST00000491060 MFSD6Q6ZSS7 791 aa16.08■□□□□ 0.16
TRAIP-211ENST00000491060 PRPF38AQ8NAV1 312 aaKnown RBP16.08■□□□□ 0.16
TRAIP-211ENST00000491060 GMCL1P1Q8NEA9 526 aa16.08■□□□□ 0.16
TRAIP-211ENST00000491060 MKL1Q969V6 931 aa16.08■□□□□ 0.16
TRAIP-211ENST00000491060 LENG1Q96BZ8 264 aaPredicted RBP16.08■□□□□ 0.16
TRAIP-211ENST00000491060 DDX11Q96FC9 970 aa16.08■□□□□ 0.16
TRAIP-211ENST00000491060 ADAMTS5Q9UNA0 930 aa16.08■□□□□ 0.16
TRAIP-211ENST00000491060 STRNO43815 780 aa16.07■□□□□ 0.16
TRAIP-211ENST00000491060 MNX1P50219 401 aaPredicted RBP16.07■□□□□ 0.16
TRAIP-211ENST00000491060 ATN1P54259 1190 aaPredicted RBP16.07■□□□□ 0.16
TRAIP-211ENST00000491060 MFAP1P55081 439 aaKnown RBP16.07■□□□□ 0.16
TRAIP-211ENST00000491060 LHX8Q68G74 356 aa16.07■□□□□ 0.16
TRAIP-211ENST00000491060 MAML3Q96JK9 1138 aa16.07■□□□□ 0.16
TRAIP-211ENST00000491060 AGBL1Q96MI9 1066 aa16.07■□□□□ 0.16
TRAIP-211ENST00000491060 TEX13BQ9BXU2 312 aa16.07■□□□□ 0.16
TRAIP-211ENST00000491060 SLC5A4Q9NY91 659 aa16.07■□□□□ 0.16
TRAIP-211ENST00000491060 DDX20Q9UHI6 824 aaKnown RBP16.07■□□□□ 0.16
TRAIP-211ENST00000491060 ANAPC4Q9UJX5 808 aa16.07■□□□□ 0.16
TRAIP-211ENST00000491060 OGDHLQ9ULD0 1010 aa16.07■□□□□ 0.16
TRAIP-211ENST00000491060 ZNF213O14771 459 aa16.06■□□□□ 0.16
TRAIP-211ENST00000491060 ORC4O43929 436 aa16.06■□□□□ 0.16
TRAIP-211ENST00000491060 HOXC6P09630 235 aa16.06■□□□□ 0.16
TRAIP-211ENST00000491060 ALAS1P13196 640 aa16.06■□□□□ 0.16
TRAIP-211ENST00000491060 STAT2P52630 851 aa16.06■□□□□ 0.16
TRAIP-211ENST00000491060 AKNAD1Q5T1N1 836 aa16.06■□□□□ 0.16
TRAIP-211ENST00000491060 TMEM47Q9BQJ4 181 aa16.06■□□□□ 0.16
TRAIP-211ENST00000491060 DDX49Q9Y6V7 483 aaKnown RBP16.06■□□□□ 0.16
TRAIP-211ENST00000491060 PFASO15067 1338 aa16.05■□□□□ 0.16
TRAIP-211ENST00000491060 B4E1Z4 1266 aa16.05■□□□□ 0.16
TRAIP-211ENST00000491060 CYBAP13498 195 aa16.05■□□□□ 0.16
TRAIP-211ENST00000491060 HABP4Q5JVS0 413 aaKnown RBP16.05■□□□□ 0.16
TRAIP-211ENST00000491060 ANKRD35Q8N283 1001 aa16.05■□□□□ 0.16
TRAIP-211ENST00000491060 STAG1Q8WVM7 1258 aa16.05■□□□□ 0.16
TRAIP-211ENST00000491060 FERMT2Q96AC1 680 aa16.05■□□□□ 0.16
TRAIP-211ENST00000491060 SENP6Q9GZR1 1112 aaPredicted RBP16.05■□□□□ 0.16
TRAIP-211ENST00000491060 CPVLQ9H3G5 476 aa16.05■□□□□ 0.16
TRAIP-211ENST00000491060 SLC38A10Q9HBR0 1119 aa16.05■□□□□ 0.16
TRAIP-211ENST00000491060 HIP1O00291 1037 aa16.04■□□□□ 0.16
TRAIP-211ENST00000491060 KDM4AO75164 1064 aa16.04■□□□□ 0.16
TRAIP-211ENST00000491060 GOLGA8HP0CJ92 632 aa16.04■□□□□ 0.16
TRAIP-211ENST00000491060 OLFML2BQ68BL8 750 aa16.04■□□□□ 0.16
TRAIP-211ENST00000491060 RCSD1Q6JBY9 416 aa16.04■□□□□ 0.16
TRAIP-211ENST00000491060 RNF146Q9NTX7 359 aa16.04■□□□□ 0.16
TRAIP-211ENST00000491060 ZHX1Q9UKY1 873 aaPredicted RBP16.04■□□□□ 0.16
TRAIP-211ENST00000491060 PRR12Q9ULL5 1215 aa16.04■□□□□ 0.16
TRAIP-211ENST00000491060 NR2E3Q9Y5X4 410 aa16.04■□□□□ 0.16
TRAIP-211ENST00000491060 CEP290O15078 2479 aa16.04■□□□□ 0.16
TRAIP-211ENST00000491060 TOP1P11387 765 aaKnown RBP16.03■□□□□ 0.16
TRAIP-211ENST00000491060 LRRC26Q2I0M4 334 aa16.03■□□□□ 0.16
TRAIP-211ENST00000491060 ZNF792Q3KQV3 632 aa16.03■□□□□ 0.16
TRAIP-211ENST00000491060 ANKLE1Q8NAG6 615 aa16.03■□□□□ 0.16
TRAIP-211ENST00000491060 CHURC1Q8WUH1 139 aa16.03■□□□□ 0.16
TRAIP-211ENST00000491060 MYH6P13533 1939 aa16.03■□□□□ 0.16
TRAIP-211ENST00000491060 CNTN2Q02246 1040 aa16.02■□□□□ 0.16
TRAIP-211ENST00000491060 MUM1L1Q5H9M0 696 aa16.02■□□□□ 0.16
TRAIP-211ENST00000491060 NSMFQ6X4W1 530 aa16.02■□□□□ 0.16
TRAIP-211ENST00000491060 FAM160B2Q86V87 743 aa16.02■□□□□ 0.16
TRAIP-211ENST00000491060 ABRAQ8N0Z2 381 aa16.02■□□□□ 0.16
TRAIP-211ENST00000491060 DCAF4Q8WV16 495 aa16.02■□□□□ 0.16
TRAIP-211ENST00000491060 GMCL1Q96IK5 515 aa16.02■□□□□ 0.16
TRAIP-211ENST00000491060 TRERF1Q96PN7 1200 aa16.02■□□□□ 0.16
TRAIP-211ENST00000491060 PURBQ96QR8 312 aaKnown RBP16.02■□□□□ 0.16
TRAIP-211ENST00000491060 TINF2Q9BSI4 451 aa16.02■□□□□ 0.16
TRAIP-211ENST00000491060 RBM27Q9P2N5 1060 aaKnown RBP16.02■□□□□ 0.16
TRAIP-211ENST00000491060 CCPG1Q9ULG6 757 aa16.02■□□□□ 0.16
TRAIP-211ENST00000491060 PGK1P00558 417 aa16.01■□□□□ 0.15
TRAIP-211ENST00000491060 COPB2P35606 906 aa16.01■□□□□ 0.15
TRAIP-211ENST00000491060 PTH1RQ03431 593 aa16.01■□□□□ 0.15
TRAIP-211ENST00000491060 IMMTQ16891 758 aaKnown RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms