RNA–Protein interactions for RNA: ENST00000490543.5

SRRM1-217, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 5

Gene SRRM1, Length 673 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-217ENST00000490543 ARID4AP29374 1257 aaPredicted RBP11.05□□□□□ -0.64
SRRM1-217ENST00000490543 QPCTQ16769 361 aa11.05□□□□□ -0.64
SRRM1-217ENST00000490543 GORABQ5T7V8 394 aa11.05□□□□□ -0.64
SRRM1-217ENST00000490543 LYPD8Q6UX82 237 aa11.05□□□□□ -0.64
SRRM1-217ENST00000490543 ADGRA1Q86SQ6 560 aa11.05□□□□□ -0.64
SRRM1-217ENST00000490543 METTL16Q86W50 562 aaKnown RBP11.05□□□□□ -0.64
SRRM1-217ENST00000490543 FOXP4Q8IVH2 680 aaPredicted RBP11.05□□□□□ -0.64
SRRM1-217ENST00000490543 TGFBRAP1Q8WUH2 860 aa11.05□□□□□ -0.64
SRRM1-217ENST00000490543 EDC3Q96F86 508 aaKnown RBP11.05□□□□□ -0.64
SRRM1-217ENST00000490543 SNRKQ9NRH2 765 aa11.05□□□□□ -0.64
SRRM1-217ENST00000490543 LRP2BPQ9P2M1 347 aa11.05□□□□□ -0.64
SRRM1-217ENST00000490543 ZBTB21Q9ULJ3 1066 aa11.05□□□□□ -0.64
SRRM1-217ENST00000490543 CNGA1P29973 690 aa11.04□□□□□ -0.64
SRRM1-217ENST00000490543 CYP2C19P33261 490 aa11.04□□□□□ -0.64
SRRM1-217ENST00000490543 SHHQ15465 462 aa11.04□□□□□ -0.64
SRRM1-217ENST00000490543 TUSC1Q2TAM9 212 aa11.04□□□□□ -0.64
SRRM1-217ENST00000490543 C9orf50Q5SZB4 431 aa11.04□□□□□ -0.64
SRRM1-217ENST00000490543 TRPV1Q8NER1 839 aa11.04□□□□□ -0.64
SRRM1-217ENST00000490543 DHX36Q9H2U1 1008 aaKnown RBP11.04□□□□□ -0.64
SRRM1-217ENST00000490543 SEMA6BQ9H3T3 888 aa11.04□□□□□ -0.64
SRRM1-217ENST00000490543 DDX20Q9UHI6 824 aaKnown RBP11.04□□□□□ -0.64
SRRM1-217ENST00000490543 SAP30BPQ9UHR5 308 aaKnown RBP11.04□□□□□ -0.64
SRRM1-217ENST00000490543 J3QL48 77 aa11.03□□□□□ -0.64
SRRM1-217ENST00000490543 RTP1P59025 263 aa11.03□□□□□ -0.64
SRRM1-217ENST00000490543 SH3BP2P78314 561 aa11.03□□□□□ -0.64
SRRM1-217ENST00000490543 ZYXQ15942 572 aaKnown RBP11.03□□□□□ -0.64
SRRM1-217ENST00000490543 GJC2Q5T442 439 aaPredicted RBP11.03□□□□□ -0.64
SRRM1-217ENST00000490543 WDR78Q5VTH9 848 aa11.03□□□□□ -0.64
SRRM1-217ENST00000490543 MFSD14CQ5VZR4 134 aa11.03□□□□□ -0.64
SRRM1-217ENST00000490543 NAA16Q6N069 864 aaPredicted RBP11.03□□□□□ -0.64
SRRM1-217ENST00000490543 USP17L2Q6R6M4 530 aa11.03□□□□□ -0.64
SRRM1-217ENST00000490543 CRIPAKQ8N1N5 446 aa11.03□□□□□ -0.64
SRRM1-217ENST00000490543 CRACR2BQ8N4Y2 399 aaPredicted RBP11.03□□□□□ -0.64
SRRM1-217ENST00000490543 MAFAQ8NHW3 353 aaPredicted RBP11.03□□□□□ -0.64
SRRM1-217ENST00000490543 NPLOC4Q8TAT6 608 aa11.03□□□□□ -0.64
SRRM1-217ENST00000490543 LPAR1Q92633 364 aa11.03□□□□□ -0.64
SRRM1-217ENST00000490543 CWC22Q9HCG8 908 aaKnown RBP11.03□□□□□ -0.64
SRRM1-217ENST00000490543 BTBD7Q9P203 1132 aa11.03□□□□□ -0.64
SRRM1-217ENST00000490543 RABGAP1Q9Y3P9 1069 aa11.03□□□□□ -0.64
SRRM1-217ENST00000490543 PRUNE2Q8WUY3 3088 aa11.03□□□□□ -0.64
SRRM1-217ENST00000490543 FLT1P17948 1338 aa11.03□□□□□ -0.64
SRRM1-217ENST00000490543 FRMPD3Q5JV73 1810 aa11.02□□□□□ -0.64
SRRM1-217ENST00000490543 SLC15A5A6NIM6 579 aa11.02□□□□□ -0.65
SRRM1-217ENST00000490543 LILRB3O75022 631 aa11.02□□□□□ -0.65
SRRM1-217ENST00000490543 BAG3O95817 575 aa11.02□□□□□ -0.65
SRRM1-217ENST00000490543 GH2P01242 217 aa11.02□□□□□ -0.65
SRRM1-217ENST00000490543 IGHA2P01877 340 aa11.02□□□□□ -0.65
SRRM1-217ENST00000490543 CLK2P49760 499 aaKnown RBP11.02□□□□□ -0.65
SRRM1-217ENST00000490543 DYNLL1P63167 89 aaKnown RBP11.02□□□□□ -0.65
SRRM1-217ENST00000490543 ATP2B2Q01814 1243 aa11.02□□□□□ -0.65
SRRM1-217ENST00000490543 MTX1Q13505 466 aa11.02□□□□□ -0.65
SRRM1-217ENST00000490543 ANO1Q5XXA6 986 aa11.02□□□□□ -0.65
SRRM1-217ENST00000490543 GTF3C2Q8WUA4 911 aaPredicted RBP11.02□□□□□ -0.65
SRRM1-217ENST00000490543 MYLIPQ8WY64 445 aa11.02□□□□□ -0.65
SRRM1-217ENST00000490543 NOL10Q9BSC4 688 aaKnown RBP11.02□□□□□ -0.65
SRRM1-217ENST00000490543 TRIM34Q9BYJ4 488 aa11.02□□□□□ -0.65
SRRM1-217ENST00000490543 TTYH1Q9H313 450 aaPredicted RBP11.02□□□□□ -0.65
SRRM1-217ENST00000490543 KDM4CQ9H3R0 1056 aa11.02□□□□□ -0.65
SRRM1-217ENST00000490543 HDAC5Q9UQL6 1122 aa11.02□□□□□ -0.65
SRRM1-217ENST00000490543 ATP11BQ9Y2G3 1177 aa11.02□□□□□ -0.65
SRRM1-217ENST00000490543 EYSQ5T1H1 3165 aa11.02□□□□□ -0.65
SRRM1-217ENST00000490543 SPTBN5Q9NRC6 3674 aaKnown RBP11.02□□□□□ -0.65
SRRM1-217ENST00000490543 MAST2Q6P0Q8 1798 aa11.01□□□□□ -0.65
SRRM1-217ENST00000490543 USP17L15C9J2P7 530 aa11.01□□□□□ -0.65
SRRM1-217ENST00000490543 USP17L13C9JLJ4 530 aa11.01□□□□□ -0.65
SRRM1-217ENST00000490543 USP17L11C9JVI0 530 aa11.01□□□□□ -0.65
SRRM1-217ENST00000490543 USP17L18D6R9N7 530 aa11.01□□□□□ -0.65
SRRM1-217ENST00000490543 USP17L22D6RA61 530 aa11.01□□□□□ -0.65
SRRM1-217ENST00000490543 USP17L17D6RBQ6 530 aa11.01□□□□□ -0.65
SRRM1-217ENST00000490543 USP17L19D6RCP7 530 aa11.01□□□□□ -0.65
SRRM1-217ENST00000490543 USP17L20D6RJB6 530 aa11.01□□□□□ -0.65
SRRM1-217ENST00000490543 DNM1LO00429 736 aa11.01□□□□□ -0.65
SRRM1-217ENST00000490543 CYP2E1P05181 493 aaPredicted RBP11.01□□□□□ -0.65
SRRM1-217ENST00000490543 HOXC6P09630 235 aa11.01□□□□□ -0.65
SRRM1-217ENST00000490543 UQCRFS1P1P0C7P4 283 aa11.01□□□□□ -0.65
SRRM1-217ENST00000490543 CCNA1P78396 465 aa11.01□□□□□ -0.65
SRRM1-217ENST00000490543 USP17L24Q0WX57 530 aa11.01□□□□□ -0.65
SRRM1-217ENST00000490543 LINC01559Q495D7 138 aa11.01□□□□□ -0.65
SRRM1-217ENST00000490543 SLC39A5Q6ZMH5 540 aa11.01□□□□□ -0.65
SRRM1-217ENST00000490543 CATSPERGQ6ZRH7 1159 aa11.01□□□□□ -0.65
SRRM1-217ENST00000490543 SH3RF1Q7Z6J0 888 aa11.01□□□□□ -0.65
SRRM1-217ENST00000490543 ACER1Q8TDN7 264 aa11.01□□□□□ -0.65
SRRM1-217ENST00000490543 BAP1Q92560 729 aa11.01□□□□□ -0.65
SRRM1-217ENST00000490543 BADQ92934 168 aa11.01□□□□□ -0.65
SRRM1-217ENST00000490543 C12orf42Q96LP6 360 aa11.01□□□□□ -0.65
SRRM1-217ENST00000490543 API5Q9BZZ5 524 aaKnown RBP11.01□□□□□ -0.65
SRRM1-217ENST00000490543 PRDM6Q9NQX0 595 aa11.01□□□□□ -0.65
SRRM1-217ENST00000490543 GINM1Q9NU53 330 aa11.01□□□□□ -0.65
SRRM1-217ENST00000490543 POLR3EQ9NVU0 708 aa11.01□□□□□ -0.65
SRRM1-217ENST00000490543 PRKAG2Q9UGJ0 569 aa11.01□□□□□ -0.65
SRRM1-217ENST00000490543 CDK5RAP2Q96SN8 1893 aa11□□□□□ -0.65
SRRM1-217ENST00000490543 PNMA6EA0A0J9YXQ4 647 aa11□□□□□ -0.65
SRRM1-217ENST00000490543 GLRX3O76003 335 aaKnown RBP11□□□□□ -0.65
SRRM1-217ENST00000490543 CYBAP13498 195 aa11□□□□□ -0.65
SRRM1-217ENST00000490543 CTHP32929 405 aa11□□□□□ -0.65
SRRM1-217ENST00000490543 GRB14Q14449 540 aa11□□□□□ -0.65
SRRM1-217ENST00000490543 TRMT2AQ8IZ69 625 aaKnown RBP11□□□□□ -0.65
SRRM1-217ENST00000490543 EHBP1Q8NDI1 1231 aa11□□□□□ -0.65
SRRM1-217ENST00000490543 FEZ1Q99689 392 aa11□□□□□ -0.65
SRRM1-217ENST00000490543 PRDM5Q9NQX1 630 aaPredicted RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms