RNA–Protein interactions for RNA: ENST00000490308.1

EPB41-212, Transcript of erythrocyte membrane protein band 4.1, humanhuman

TSL 3

Gene EPB41, Length 354 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPB41-212ENST00000490308 ARHGEF4Q9NR80 690 aa3.3□□□□□ -1.88
EPB41-212ENST00000490308 LATS2Q9NRM7 1088 aa3.3□□□□□ -1.88
EPB41-212ENST00000490308 TRMT13Q9NUP7 481 aaKnown RBP3.3□□□□□ -1.88
EPB41-212ENST00000490308 NDOR1Q9UHB4 597 aa3.3□□□□□ -1.88
EPB41-212ENST00000490308 SAP30BPQ9UHR5 308 aaKnown RBP3.3□□□□□ -1.88
EPB41-212ENST00000490308 PCDHB5Q9Y5E4 795 aa3.3□□□□□ -1.88
EPB41-212ENST00000490308 TNPO3Q9Y5L0 923 aaKnown RBP3.3□□□□□ -1.88
EPB41-212ENST00000490308 TNKSO95271 1327 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 A0A1W2PNR3 127 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 UPK3BL1B0FP48 263 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 UPK3BL2E5RIL1 263 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 PMM2O15305 246 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 PRODHO43272 600 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 MAFKO60675 156 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 CTNND1O60716 968 aaKnown RBP3.29□□□□□ -1.88
EPB41-212ENST00000490308 MMP20O60882 483 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 PAGE1O75459 146 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 OFD1O75665 1012 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 DNAJC8O75937 253 aaPredicted RBP3.29□□□□□ -1.88
EPB41-212ENST00000490308 SASH3O75995 380 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 IL33O95760 270 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 APBA3O96018 575 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 CPP00450 1065 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 GHRHP01286 108 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 HRGP04196 525 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 ZKSCAN1P17029 563 aaPredicted RBP3.29□□□□□ -1.88
EPB41-212ENST00000490308 RPL17P18621 184 aaKnown RBP3.29□□□□□ -1.88
EPB41-212ENST00000490308 PLCG1P19174 1290 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 SDSP20132 328 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 LSSP48449 732 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 RENBPP51606 427 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 PMS1P54277 932 aaKnown RBP3.29□□□□□ -1.88
EPB41-212ENST00000490308 CACNB3P54284 484 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 NRLP54845 237 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 FAM193AP78312 1265 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 RELBQ01201 579 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 NUCB1Q02818 461 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 CDC37Q16543 378 aaPredicted RBP3.29□□□□□ -1.88
EPB41-212ENST00000490308 TBC1D10BQ4KMP7 808 aaPredicted RBP3.29□□□□□ -1.88
EPB41-212ENST00000490308 ATP13A4Q4VNC1 1196 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 TMEM201Q5SNT2 666 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 DUSP27Q5VZP5 1158 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 CDCA2Q69YH5 1023 aaPredicted RBP3.29□□□□□ -1.88
EPB41-212ENST00000490308 FAAH2Q6GMR7 532 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 RUFY4Q6ZNE9 571 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 C4orf50Q6ZRC1 276 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 RFX8Q6ZV50 586 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 BRINP3Q76B58 766 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 CHST15Q7LFX5 561 aaPredicted RBP3.29□□□□□ -1.88
EPB41-212ENST00000490308 MAATS1Q7Z4T9 603 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 BRAPQ7Z569 592 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 DPP9Q86TI2 863 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 GIMAP8Q8ND71 665 aaPredicted RBP3.29□□□□□ -1.88
EPB41-212ENST00000490308 LRRN4CLQ8ND94 238 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 GSTCDQ8NEC7 633 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 VPS37AQ8NEZ2 397 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 FERMT2Q96AC1 680 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 PGBD4Q96DM1 585 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 ATG4CQ96DT6 458 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 ACSBG1Q96GR2 724 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 PPM1MQ96MI6 270 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 FAM193BQ96PV7 902 aaPredicted RBP3.29□□□□□ -1.88
EPB41-212ENST00000490308 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP3.29□□□□□ -1.88
EPB41-212ENST00000490308 CCDC8Q9H0W5 538 aaPredicted RBP3.29□□□□□ -1.88
EPB41-212ENST00000490308 CRISPLD1Q9H336 500 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 LGR6Q9HBX8 967 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 KIAA1586Q9HCI6 787 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 TRIM39Q9HCM9 518 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 KRT82Q9NSB4 513 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 MKS1Q9NXB0 559 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 C9orf78Q9NZ63 289 aaPredicted RBP3.29□□□□□ -1.88
EPB41-212ENST00000490308 SUCOQ9UBS9 1254 aaKnown RBP3.29□□□□□ -1.88
EPB41-212ENST00000490308 GTF2IRD1Q9UHL9 959 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 KLF15Q9UIH9 416 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 IPPQ9Y573 584 aa3.29□□□□□ -1.88
EPB41-212ENST00000490308 KLHL33A6NCF5 533 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 SLC22A31A6NKX4 558 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 FOXN3O00409 490 aaPredicted RBP3.28□□□□□ -1.88
EPB41-212ENST00000490308 NEMP1O14524 444 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 CBFA2T2O43439 604 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 GRIN3BO60391 1043 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 TLR5O60602 858 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 DTNBO60941 627 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 HIP1RO75146 1068 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 FKBP9O95302 570 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 ZBED1O96006 694 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 RPN1P04843 607 aaKnown RBP3.28□□□□□ -1.88
EPB41-212ENST00000490308 CYP11A1P05108 521 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 RBP3P10745 1247 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 TIMP2P16035 220 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 SMPD1P17405 629 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 PTPRAP18433 802 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 LPOP22079 712 aaPredicted RBP3.28□□□□□ -1.88
EPB41-212ENST00000490308 ARL4DP49703 201 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 PCDH1Q08174 1060 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 MAP4K2Q12851 820 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 PPFIA1Q13136 1202 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 PRKG2Q13237 762 aa3.28□□□□□ -1.88
EPB41-212ENST00000490308 SIM2Q14190 667 aaPredicted RBP3.28□□□□□ -1.88
EPB41-212ENST00000490308 ARHGAP44Q17R89 818 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms