RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 IL27Q8NEV9 243 aa20.38■□□□□ 0.85
ERCC3-207ENST00000490062 ZNF214Q9UL59 606 aaPredicted RBP20.38■□□□□ 0.85
ERCC3-207ENST00000490062 CASP8AP2Q9UKL3 1982 aa20.37■□□□□ 0.85
ERCC3-207ENST00000490062 NID2Q14112 1375 aa20.37■□□□□ 0.85
ERCC3-207ENST00000490062 CCDC69A6NI79 296 aa20.37■□□□□ 0.85
ERCC3-207ENST00000490062 PARP1P09874 1014 aaKnown RBP20.37■□□□□ 0.85
ERCC3-207ENST00000490062 SMARCA1P28370 1054 aa20.37■□□□□ 0.85
ERCC3-207ENST00000490062 CCNA1P78396 465 aa20.37■□□□□ 0.85
ERCC3-207ENST00000490062 ARHGEF6Q15052 776 aa20.37■□□□□ 0.85
ERCC3-207ENST00000490062 CCDC96Q2M329 555 aa20.37■□□□□ 0.85
ERCC3-207ENST00000490062 Q3C1V9 767 aa20.37■□□□□ 0.85
ERCC3-207ENST00000490062 APOA5Q6Q788 366 aa20.37■□□□□ 0.85
ERCC3-207ENST00000490062 LRRC2Q9BYS8 371 aa20.37■□□□□ 0.85
ERCC3-207ENST00000490062 MAD2L2Q9UI95 211 aa20.37■□□□□ 0.85
ERCC3-207ENST00000490062 PRR12Q9ULL5 1215 aa20.37■□□□□ 0.85
ERCC3-207ENST00000490062 COL11A1P12107 1806 aaPredicted RBP20.37■□□□□ 0.85
ERCC3-207ENST00000490062 CPA1P15085 419 aa20.36■□□□□ 0.85
ERCC3-207ENST00000490062 TMEM132BQ14DG7 1078 aa20.36■□□□□ 0.85
ERCC3-207ENST00000490062 SYDE2Q5VT97 1194 aa20.36■□□□□ 0.85
ERCC3-207ENST00000490062 TTBK2Q6IQ55 1244 aa20.36■□□□□ 0.85
ERCC3-207ENST00000490062 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.36■□□□□ 0.85
ERCC3-207ENST00000490062 TCEANC2Q96MN5 208 aa20.36■□□□□ 0.85
ERCC3-207ENST00000490062 C22orf23Q9BZE7 217 aa20.36■□□□□ 0.85
ERCC3-207ENST00000490062 SPATC1LQ9H0A9 340 aa20.36■□□□□ 0.85
ERCC3-207ENST00000490062 RANBP17Q9H2T7 1088 aaKnown RBP20.36■□□□□ 0.85
ERCC3-207ENST00000490062 UPF2Q9HAU5 1272 aaKnown RBP20.36■□□□□ 0.85
ERCC3-207ENST00000490062 PNMA2Q9UL42 364 aa20.36■□□□□ 0.85
ERCC3-207ENST00000490062 SLC12A7Q9Y666 1083 aa20.36■□□□□ 0.85
ERCC3-207ENST00000490062 MGAMO43451 1857 aa20.36■□□□□ 0.85
ERCC3-207ENST00000490062 FRMPD2Q68DX3 1309 aaPredicted RBP20.35■□□□□ 0.85
ERCC3-207ENST00000490062 ZBED4O75132 1171 aa20.35■□□□□ 0.85
ERCC3-207ENST00000490062 COPB2P35606 906 aa20.35■□□□□ 0.85
ERCC3-207ENST00000490062 KIF22Q14807 665 aa20.35■□□□□ 0.85
ERCC3-207ENST00000490062 PPP2R5BQ15173 497 aa20.35■□□□□ 0.85
ERCC3-207ENST00000490062 Q6ZUG5 572 aa20.35■□□□□ 0.85
ERCC3-207ENST00000490062 RIOX2Q8IUF8 465 aa20.35■□□□□ 0.85
ERCC3-207ENST00000490062 KIFC2Q96AC6 838 aa20.35■□□□□ 0.85
ERCC3-207ENST00000490062 SLC25A27O95847 323 aa20.34■□□□□ 0.85
ERCC3-207ENST00000490062 CTGFP29279 349 aa20.34■□□□□ 0.85
ERCC3-207ENST00000490062 MAPK4P31152 587 aa20.34■□□□□ 0.85
ERCC3-207ENST00000490062 KIF5BP33176 963 aa20.34■□□□□ 0.85
ERCC3-207ENST00000490062 GNAQP50148 359 aa20.34■□□□□ 0.85
ERCC3-207ENST00000490062 CAP1Q01518 475 aa20.34■□□□□ 0.85
ERCC3-207ENST00000490062 NFXL1Q6ZNB6 911 aa20.34■□□□□ 0.85
ERCC3-207ENST00000490062 CD99L2Q8TCZ2 262 aa20.34■□□□□ 0.85
ERCC3-207ENST00000490062 MTMR8Q96EF0 704 aa20.34■□□□□ 0.85
ERCC3-207ENST00000490062 KIF2CQ99661 725 aa20.34■□□□□ 0.85
ERCC3-207ENST00000490062 PAGR1Q9BTK6 254 aa20.34■□□□□ 0.85
ERCC3-207ENST00000490062 TEX13BQ9BXU2 312 aa20.34■□□□□ 0.85
ERCC3-207ENST00000490062 UPF3BQ9BZI7 483 aaKnown RBP20.34■□□□□ 0.85
ERCC3-207ENST00000490062 GPCPD1Q9NPB8 672 aa20.34■□□□□ 0.85
ERCC3-207ENST00000490062 BRPF3Q9ULD4 1205 aa20.34■□□□□ 0.85
ERCC3-207ENST00000490062 MTMR7Q9Y216 660 aa20.34■□□□□ 0.85
ERCC3-207ENST00000490062 ZNF536O15090 1300 aa20.33■□□□□ 0.85
ERCC3-207ENST00000490062 KLRF2D3W0D1 207 aa20.33■□□□□ 0.85
ERCC3-207ENST00000490062 GOLGA8HP0CJ92 632 aa20.33■□□□□ 0.85
ERCC3-207ENST00000490062 PRMT2P55345 433 aa20.33■□□□□ 0.85
ERCC3-207ENST00000490062 FCGRTP55899 365 aa20.33■□□□□ 0.85
ERCC3-207ENST00000490062 TOB2Q14106 344 aaPredicted RBP20.33■□□□□ 0.85
ERCC3-207ENST00000490062 SYNE3Q6ZMZ3 975 aa20.33■□□□□ 0.85
ERCC3-207ENST00000490062 STAG2Q8N3U4 1231 aa20.33■□□□□ 0.85
ERCC3-207ENST00000490062 CTCFLQ8NI51 663 aaPredicted RBP20.33■□□□□ 0.85
ERCC3-207ENST00000490062 BRF1Q92994 677 aa20.33■□□□□ 0.85
ERCC3-207ENST00000490062 TBC1D32Q96NH3 1257 aa20.33■□□□□ 0.85
ERCC3-207ENST00000490062 LZTS2Q9BRK4 669 aa20.33■□□□□ 0.85
ERCC3-207ENST00000490062 MOV10L1Q9BXT6 1211 aaKnown RBP20.33■□□□□ 0.85
ERCC3-207ENST00000490062 MROH8Q9H579 483 aa20.33■□□□□ 0.85
ERCC3-207ENST00000490062 RIOX1Q9H6W3 641 aa20.33■□□□□ 0.85
ERCC3-207ENST00000490062 SLC16A2P36021 539 aa20.32■□□□□ 0.84
ERCC3-207ENST00000490062 STAT3P40763 770 aa20.32■□□□□ 0.84
ERCC3-207ENST00000490062 PSMC4P43686 418 aa20.32■□□□□ 0.84
ERCC3-207ENST00000490062 IKQ13123 557 aaPredicted RBP20.32■□□□□ 0.84
ERCC3-207ENST00000490062 CTU1Q7Z7A3 348 aaKnown RBP20.32■□□□□ 0.84
ERCC3-207ENST00000490062 FANCBQ8NB91 859 aa20.32■□□□□ 0.84
ERCC3-207ENST00000490062 TRIM47Q96LD4 638 aa20.32■□□□□ 0.84
ERCC3-207ENST00000490062 SPZ1Q9BXG8 430 aa20.32■□□□□ 0.84
ERCC3-207ENST00000490062 PORCNQ9H237 461 aa20.32■□□□□ 0.84
ERCC3-207ENST00000490062 PDRG1Q9NUG6 133 aa20.32■□□□□ 0.84
ERCC3-207ENST00000490062 ZNF236Q9UL36 1845 aa20.32■□□□□ 0.84
ERCC3-207ENST00000490062 DOCK3Q8IZD9 2030 aa20.31■□□□□ 0.84
ERCC3-207ENST00000490062 KLF18A0A0U1RQI7 1052 aa20.31■□□□□ 0.84
ERCC3-207ENST00000490062 ZBTB43O43298 467 aa20.31■□□□□ 0.84
ERCC3-207ENST00000490062 PEX10O60683 326 aa20.31■□□□□ 0.84
ERCC3-207ENST00000490062 ICAM1P05362 532 aa20.31■□□□□ 0.84
ERCC3-207ENST00000490062 FGD1P98174 961 aa20.31■□□□□ 0.84
ERCC3-207ENST00000490062 PKN2Q16513 984 aaKnown RBP20.31■□□□□ 0.84
ERCC3-207ENST00000490062 SLC35G1Q2M3R5 365 aa20.31■□□□□ 0.84
ERCC3-207ENST00000490062 TKFCQ3LXA3 575 aa20.31■□□□□ 0.84
ERCC3-207ENST00000490062 OTOP1Q7RTM1 612 aa20.31■□□□□ 0.84
ERCC3-207ENST00000490062 ADGRF4Q8IZF3 695 aa20.31■□□□□ 0.84
ERCC3-207ENST00000490062 ABRAQ8N0Z2 381 aa20.31■□□□□ 0.84
ERCC3-207ENST00000490062 ZNF274Q96GC6 653 aaPredicted RBP20.31■□□□□ 0.84
ERCC3-207ENST00000490062 ARHGAP39Q9C0H5 1083 aa20.31■□□□□ 0.84
ERCC3-207ENST00000490062 EFCC1Q9HA90 598 aa20.31■□□□□ 0.84
ERCC3-207ENST00000490062 RBM28Q9NW13 759 aaKnown RBP20.31■□□□□ 0.84
ERCC3-207ENST00000490062 ZSWIM8A7E2V4 1837 aa20.3■□□□□ 0.84
ERCC3-207ENST00000490062 STRNO43815 780 aa20.3■□□□□ 0.84
ERCC3-207ENST00000490062 HOXD10P28358 340 aa20.3■□□□□ 0.84
ERCC3-207ENST00000490062 ANKRD1Q15327 319 aa20.3■□□□□ 0.84
ERCC3-207ENST00000490062 NUP133Q8WUM0 1156 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 158.1 ms