RNA–Protein interactions for RNA: ENST00000490032.5

HMGN1-218, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 405 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-218ENST00000490032 USP2O75604 605 aaPredicted RBP6.56□□□□□ -1.36
HMGN1-218ENST00000490032 ZNF205O95201 554 aa6.56□□□□□ -1.36
HMGN1-218ENST00000490032 EFEMP2O95967 443 aa6.56□□□□□ -1.36
HMGN1-218ENST00000490032 C1QTNF9P0C862 333 aa6.56□□□□□ -1.36
HMGN1-218ENST00000490032 ENDOUP21128 410 aaKnown RBP6.56□□□□□ -1.36
HMGN1-218ENST00000490032 GLDCP23378 1020 aa6.56□□□□□ -1.36
HMGN1-218ENST00000490032 GUCY2CP25092 1073 aa6.56□□□□□ -1.36
HMGN1-218ENST00000490032 SOX9P48436 509 aa6.56□□□□□ -1.36
HMGN1-218ENST00000490032 HDLBPQ00341 1268 aaKnown RBP6.56□□□□□ -1.36
HMGN1-218ENST00000490032 KRTAP19-4Q3LI73 84 aa6.56□□□□□ -1.36
HMGN1-218ENST00000490032 ZPBP2Q6X784 338 aa6.56□□□□□ -1.36
HMGN1-218ENST00000490032 PPFIBP1Q86W92 1011 aa6.56□□□□□ -1.36
HMGN1-218ENST00000490032 LSRQ86X29 649 aaPredicted RBP6.56□□□□□ -1.36
HMGN1-218ENST00000490032 MRRFQ96E11 262 aaKnown RBP6.56□□□□□ -1.36
HMGN1-218ENST00000490032 FCRL2Q96LA5 508 aaPredicted RBP6.56□□□□□ -1.36
HMGN1-218ENST00000490032 GINM1Q9NU53 330 aa6.56□□□□□ -1.36
HMGN1-218ENST00000490032 FBXL21Q9UKT6 434 aa6.56□□□□□ -1.36
HMGN1-218ENST00000490032 FAM86C2PA6NEL3 165 aa6.55□□□□□ -1.36
HMGN1-218ENST00000490032 NFIBO00712 420 aa6.55□□□□□ -1.36
HMGN1-218ENST00000490032 PEX10O60683 326 aa6.55□□□□□ -1.36
HMGN1-218ENST00000490032 FKTNO75072 461 aa6.55□□□□□ -1.36
HMGN1-218ENST00000490032 ZYXQ15942 572 aaKnown RBP6.55□□□□□ -1.36
HMGN1-218ENST00000490032 UNC5AQ6ZN44 842 aa6.55□□□□□ -1.36
HMGN1-218ENST00000490032 C1QL4Q86Z23 238 aa6.55□□□□□ -1.36
HMGN1-218ENST00000490032 CCDC144CPQ8IYA2 1237 aa6.55□□□□□ -1.36
HMGN1-218ENST00000490032 TOX2Q96NM4 488 aa6.55□□□□□ -1.36
HMGN1-218ENST00000490032 ZNF552Q9H707 407 aaPredicted RBP6.55□□□□□ -1.36
HMGN1-218ENST00000490032 CRTAC1Q9NQ79 661 aa6.55□□□□□ -1.36
HMGN1-218ENST00000490032 KIAA1522Q9P206 1035 aaPredicted RBP6.55□□□□□ -1.36
HMGN1-218ENST00000490032 TNFRSF10DQ9UBN6 386 aa6.55□□□□□ -1.36
HMGN1-218ENST00000490032 FADS2P1A8MWK0 482 aa6.54□□□□□ -1.36
HMGN1-218ENST00000490032 GSNP06396 782 aa6.54□□□□□ -1.36
HMGN1-218ENST00000490032 TMEM253P0C7T8 217 aa6.54□□□□□ -1.36
HMGN1-218ENST00000490032 GJA8P48165 433 aa6.54□□□□□ -1.36
HMGN1-218ENST00000490032 CEBPAP49715 358 aaPredicted RBP6.54□□□□□ -1.36
HMGN1-218ENST00000490032 AXDND1Q5T1B0 1012 aaPredicted RBP6.54□□□□□ -1.36
HMGN1-218ENST00000490032 TDRD10Q5VZ19 366 aaKnown RBP6.54□□□□□ -1.36
HMGN1-218ENST00000490032 FBXW10Q5XX13 1052 aa6.54□□□□□ -1.36
HMGN1-218ENST00000490032 RUFY4Q6ZNE9 571 aa6.54□□□□□ -1.36
HMGN1-218ENST00000490032 CEP128Q6ZU80 1094 aa6.54□□□□□ -1.36
HMGN1-218ENST00000490032 ANKLE2Q86XL3 938 aa6.54□□□□□ -1.36
HMGN1-218ENST00000490032 NT5DC4Q86YG4 428 aa6.54□□□□□ -1.36
HMGN1-218ENST00000490032 GPRASP2Q96D09 838 aa6.54□□□□□ -1.36
HMGN1-218ENST00000490032 CD320Q9NPF0 282 aa6.54□□□□□ -1.36
HMGN1-218ENST00000490032 ERVK13-1Q9NX77 482 aa6.54□□□□□ -1.36
HMGN1-218ENST00000490032 MYOCOSA0A1B0GUC4 107 aa6.53□□□□□ -1.36
HMGN1-218ENST00000490032 UNCXA6NJT0 531 aa6.53□□□□□ -1.36
HMGN1-218ENST00000490032 ETV2O00321 342 aaPredicted RBP6.53□□□□□ -1.36
HMGN1-218ENST00000490032 MEIS1O00470 390 aa6.53□□□□□ -1.36
HMGN1-218ENST00000490032 VAV1P15498 845 aa6.53□□□□□ -1.36
HMGN1-218ENST00000490032 CFPP27918 469 aa6.53□□□□□ -1.36
HMGN1-218ENST00000490032 SLC14A2Q15849 920 aa6.53□□□□□ -1.36
HMGN1-218ENST00000490032 CRTC3Q6UUV7 619 aa6.53□□□□□ -1.36
HMGN1-218ENST00000490032 SPOCD1Q6ZMY3 1216 aa6.53□□□□□ -1.36
HMGN1-218ENST00000490032 RGS22Q8NE09 1264 aa6.53□□□□□ -1.36
HMGN1-218ENST00000490032 MCOLN1Q9GZU1 580 aa6.53□□□□□ -1.36
HMGN1-218ENST00000490032 ZNF214Q9UL59 606 aaPredicted RBP6.53□□□□□ -1.36
HMGN1-218ENST00000490032 EFR3BQ9Y2G0 817 aa6.53□□□□□ -1.36
HMGN1-218ENST00000490032 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.53□□□□□ -1.36
HMGN1-218ENST00000490032 SEMA7AO75326 666 aa6.52□□□□□ -1.37
HMGN1-218ENST00000490032 GIPRP48546 466 aa6.52□□□□□ -1.37
HMGN1-218ENST00000490032 GALK1P51570 392 aa6.52□□□□□ -1.37
HMGN1-218ENST00000490032 RTP1P59025 263 aa6.52□□□□□ -1.37
HMGN1-218ENST00000490032 RTP2Q5QGT7 225 aa6.52□□□□□ -1.37
HMGN1-218ENST00000490032 DCAF15Q66K64 600 aa6.52□□□□□ -1.37
HMGN1-218ENST00000490032 CCDC81Q6ZN84 652 aa6.52□□□□□ -1.37
HMGN1-218ENST00000490032 ATG14Q6ZNE5 492 aa6.52□□□□□ -1.37
HMGN1-218ENST00000490032 ZNF605Q86T29 641 aa6.52□□□□□ -1.37
HMGN1-218ENST00000490032 C19orf47Q8N9M1 422 aaKnown RBP6.52□□□□□ -1.37
HMGN1-218ENST00000490032 KCNN1Q92952 543 aa6.52□□□□□ -1.37
HMGN1-218ENST00000490032 GP6Q9HCN6 339 aa6.52□□□□□ -1.37
HMGN1-218ENST00000490032 LTBP3Q9NS15 1303 aa6.51□□□□□ -1.37
HMGN1-218ENST00000490032 TEX51A0A1B0GUA7 166 aa6.51□□□□□ -1.37
HMGN1-218ENST00000490032 OR14I1A6ND48 311 aa6.51□□□□□ -1.37
HMGN1-218ENST00000490032 HRKO00198 91 aa6.51□□□□□ -1.37
HMGN1-218ENST00000490032 PNLIPP16233 465 aa6.51□□□□□ -1.37
HMGN1-218ENST00000490032 CD247P20963 164 aa6.51□□□□□ -1.37
HMGN1-218ENST00000490032 PDE6BP35913 854 aa6.51□□□□□ -1.37
HMGN1-218ENST00000490032 ZNF445P59923 1031 aa6.51□□□□□ -1.37
HMGN1-218ENST00000490032 HSF5Q4G112 596 aaPredicted RBP6.51□□□□□ -1.37
HMGN1-218ENST00000490032 GALNT18Q6P9A2 607 aa6.51□□□□□ -1.37
HMGN1-218ENST00000490032 SLCO6A1Q86UG4 719 aa6.51□□□□□ -1.37
HMGN1-218ENST00000490032 LRRC56Q8IYG6 542 aaPredicted RBP6.51□□□□□ -1.37
HMGN1-218ENST00000490032 OR6P1Q8NGX9 317 aa6.51□□□□□ -1.37
HMGN1-218ENST00000490032 CRBNQ96SW2 442 aa6.51□□□□□ -1.37
HMGN1-218ENST00000490032 PLCD4Q9BRC7 762 aa6.51□□□□□ -1.37
HMGN1-218ENST00000490032 DSCC1Q9BVC3 393 aa6.51□□□□□ -1.37
HMGN1-218ENST00000490032 SRRTQ9BXP5 876 aaKnown RBP6.51□□□□□ -1.37
HMGN1-218ENST00000490032 AP5S1Q9NUS5 200 aa6.51□□□□□ -1.37
HMGN1-218ENST00000490032 GPR55Q9Y2T6 319 aaPredicted RBP6.51□□□□□ -1.37
HMGN1-218ENST00000490032 FHOD1Q9Y613 1164 aa6.51□□□□□ -1.37
HMGN1-218ENST00000490032 SLC12A7Q9Y666 1083 aa6.51□□□□□ -1.37
HMGN1-218ENST00000490032 A0A1W2PQ45 241 aaPredicted RBP6.5□□□□□ -1.37
HMGN1-218ENST00000490032 A0A1W2PQY0 241 aa6.5□□□□□ -1.37
HMGN1-218ENST00000490032 TCAF2A6NFQ2 919 aa6.5□□□□□ -1.37
HMGN1-218ENST00000490032 WTIPA6NIX2 430 aaPredicted RBP6.5□□□□□ -1.37
HMGN1-218ENST00000490032 EIF6P56537 245 aaKnown RBP6.5□□□□□ -1.37
HMGN1-218ENST00000490032 DLG4P78352 724 aa6.5□□□□□ -1.37
HMGN1-218ENST00000490032 KCNA10Q16322 511 aa6.5□□□□□ -1.37
HMGN1-218ENST00000490032 C9orf131Q5VYM1 1079 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms