RNA–Protein interactions for RNA: ENST00000489921.1

TNFRSF1B-202, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 3

Gene TNFRSF1B, Length 409 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-202ENST00000489921 PDE4BQ07343 736 aa23.1■■□□□ 1.29
TNFRSF1B-202ENST00000489921 KCTD2Q14681 263 aa23.1■■□□□ 1.29
TNFRSF1B-202ENST00000489921 SNRNP48Q6IEG0 339 aaKnown RBP23.1■■□□□ 1.29
TNFRSF1B-202ENST00000489921 TEX13BQ9BXU2 312 aa23.1■■□□□ 1.29
TNFRSF1B-202ENST00000489921 SLC38A10Q9HBR0 1119 aa23.1■■□□□ 1.29
TNFRSF1B-202ENST00000489921 DNAJC25-GNG10A0A024R161 153 aa23.09■■□□□ 1.29
TNFRSF1B-202ENST00000489921 TSPY3P0CV98 308 aa23.09■■□□□ 1.29
TNFRSF1B-202ENST00000489921 TSPY8P0CW00 308 aa23.09■■□□□ 1.29
TNFRSF1B-202ENST00000489921 COPB2P35606 906 aa23.09■■□□□ 1.29
TNFRSF1B-202ENST00000489921 ATN1P54259 1190 aaPredicted RBP23.09■■□□□ 1.29
TNFRSF1B-202ENST00000489921 ARRDC4Q8NCT1 418 aa23.09■■□□□ 1.29
TNFRSF1B-202ENST00000489921 IL17RBQ9NRM6 502 aa23.09■■□□□ 1.29
TNFRSF1B-202ENST00000489921 NRBP1Q9UHY1 535 aa23.09■■□□□ 1.29
TNFRSF1B-202ENST00000489921 ZNF865P0CJ78 1059 aaPredicted RBP23.08■■□□□ 1.29
TNFRSF1B-202ENST00000489921 LRRC41Q15345 812 aa23.08■■□□□ 1.29
TNFRSF1B-202ENST00000489921 SLFN13Q68D06 897 aa23.08■■□□□ 1.29
TNFRSF1B-202ENST00000489921 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.08■■□□□ 1.29
TNFRSF1B-202ENST00000489921 KIFC2Q96AC6 838 aa23.08■■□□□ 1.29
TNFRSF1B-202ENST00000489921 FAM227BQ96M60 508 aa23.08■■□□□ 1.29
TNFRSF1B-202ENST00000489921 ANAPC4Q9UJX5 808 aa23.08■■□□□ 1.29
TNFRSF1B-202ENST00000489921 FEM1BQ9UK73 627 aa23.08■■□□□ 1.29
TNFRSF1B-202ENST00000489921 ALX1Q15699 326 aa23.07■■□□□ 1.28
TNFRSF1B-202ENST00000489921 CPXCR1Q8N123 301 aa23.07■■□□□ 1.28
TNFRSF1B-202ENST00000489921 YTHDC1Q96MU7 727 aaKnown RBP23.07■■□□□ 1.28
TNFRSF1B-202ENST00000489921 RAVER2Q9HCJ3 691 aaKnown RBP23.07■■□□□ 1.28
TNFRSF1B-202ENST00000489921 HELLSQ9NRZ9 838 aa23.07■■□□□ 1.28
TNFRSF1B-202ENST00000489921 LTBP2Q14767 1821 aa23.07■■□□□ 1.28
TNFRSF1B-202ENST00000489921 A0A0D9SFI3 127 aa23.06■■□□□ 1.28
TNFRSF1B-202ENST00000489921 NMT2O60551 498 aa23.06■■□□□ 1.28
TNFRSF1B-202ENST00000489921 ZBED4O75132 1171 aa23.06■■□□□ 1.28
TNFRSF1B-202ENST00000489921 SLC3A2P08195 630 aaKnown RBP23.06■■□□□ 1.28
TNFRSF1B-202ENST00000489921 FGRP09769 529 aa23.06■■□□□ 1.28
TNFRSF1B-202ENST00000489921 BMP3P12645 472 aa23.06■■□□□ 1.28
TNFRSF1B-202ENST00000489921 NOVP48745 357 aa23.06■■□□□ 1.28
TNFRSF1B-202ENST00000489921 SLC39A5Q6ZMH5 540 aa23.06■■□□□ 1.28
TNFRSF1B-202ENST00000489921 SMC5Q8IY18 1101 aa23.06■■□□□ 1.28
TNFRSF1B-202ENST00000489921 FGD4Q96M96 766 aa23.06■■□□□ 1.28
TNFRSF1B-202ENST00000489921 SNAI1O95863 264 aaPredicted RBP23.05■■□□□ 1.28
TNFRSF1B-202ENST00000489921 RTP1P59025 263 aa23.05■■□□□ 1.28
TNFRSF1B-202ENST00000489921 SNX17Q15036 470 aa23.05■■□□□ 1.28
TNFRSF1B-202ENST00000489921 MAMDC4Q6UXC1 1216 aa23.05■■□□□ 1.28
TNFRSF1B-202ENST00000489921 TDHQ8IZJ6 230 aa23.05■■□□□ 1.28
TNFRSF1B-202ENST00000489921 GMCL1Q96IK5 515 aa23.05■■□□□ 1.28
TNFRSF1B-202ENST00000489921 UBE2OQ9C0C9 1292 aaKnown RBP23.05■■□□□ 1.28
TNFRSF1B-202ENST00000489921 LNPKQ9C0E8 428 aa23.05■■□□□ 1.28
TNFRSF1B-202ENST00000489921 ZBTB47Q9UFB7 747 aaPredicted RBP23.05■■□□□ 1.28
TNFRSF1B-202ENST00000489921 MCM3APO60318 1980 aa23.05■■□□□ 1.28
TNFRSF1B-202ENST00000489921 KBTBD13C9JR72 458 aa23.04■■□□□ 1.28
TNFRSF1B-202ENST00000489921 IGHDP01880 384 aa23.04■■□□□ 1.28
TNFRSF1B-202ENST00000489921 ADCYAP1R1P41586 468 aa23.04■■□□□ 1.28
TNFRSF1B-202ENST00000489921 MDM2Q00987 491 aaPredicted RBP23.04■■□□□ 1.28
TNFRSF1B-202ENST00000489921 LRIT3Q3SXY7 679 aa23.04■■□□□ 1.28
TNFRSF1B-202ENST00000489921 RASGRP2Q7LDG7 609 aa23.04■■□□□ 1.28
TNFRSF1B-202ENST00000489921 ZNF536O15090 1300 aa23.04■■□□□ 1.28
TNFRSF1B-202ENST00000489921 TMEM232C9JQI7 657 aa23.03■■□□□ 1.28
TNFRSF1B-202ENST00000489921 FGAP02671 866 aa23.03■■□□□ 1.28
TNFRSF1B-202ENST00000489921 MCCP23508 829 aa23.03■■□□□ 1.28
TNFRSF1B-202ENST00000489921 SLC4A3P48751 1232 aa23.03■■□□□ 1.28
TNFRSF1B-202ENST00000489921 OAZ1P54368 228 aa23.03■■□□□ 1.28
TNFRSF1B-202ENST00000489921 AAMPQ13685 434 aa23.03■■□□□ 1.28
TNFRSF1B-202ENST00000489921 MCMDC2Q4G0Z9 681 aa23.03■■□□□ 1.28
TNFRSF1B-202ENST00000489921 ZNF589Q86UQ0 364 aaPredicted RBP23.03■■□□□ 1.28
TNFRSF1B-202ENST00000489921 TICAM2Q86XR7 235 aa23.03■■□□□ 1.28
TNFRSF1B-202ENST00000489921 MSL3Q8N5Y2 521 aaKnown RBP23.03■■□□□ 1.28
TNFRSF1B-202ENST00000489921 LENG1Q96BZ8 264 aaPredicted RBP23.03■■□□□ 1.28
TNFRSF1B-202ENST00000489921 CHMP4CQ96CF2 233 aa23.03■■□□□ 1.28
TNFRSF1B-202ENST00000489921 XPNPEP3Q9NQH7 507 aa23.03■■□□□ 1.28
TNFRSF1B-202ENST00000489921 SYNGAP1Q96PV0 1343 aa23.03■■□□□ 1.28
TNFRSF1B-202ENST00000489921 TSPY2A6NKD2 308 aa23.02■■□□□ 1.28
TNFRSF1B-202ENST00000489921 ORC4O43929 436 aa23.02■■□□□ 1.28
TNFRSF1B-202ENST00000489921 PGK1P00558 417 aa23.02■■□□□ 1.28
TNFRSF1B-202ENST00000489921 STAG1Q8WVM7 1258 aa23.02■■□□□ 1.28
TNFRSF1B-202ENST00000489921 FERMT2Q96AC1 680 aa23.02■■□□□ 1.28
TNFRSF1B-202ENST00000489921 DDX11Q96FC9 970 aa23.02■■□□□ 1.28
TNFRSF1B-202ENST00000489921 PHF24Q9UPV7 400 aa23.02■■□□□ 1.28
TNFRSF1B-202ENST00000489921 PLA2G6O60733 806 aa23.01■■□□□ 1.27
TNFRSF1B-202ENST00000489921 ADAMTS4O75173 837 aa23.01■■□□□ 1.27
TNFRSF1B-202ENST00000489921 MYCNP04198 464 aaPredicted RBP23.01■■□□□ 1.27
TNFRSF1B-202ENST00000489921 HSPD1P10809 573 aaKnown RBP23.01■■□□□ 1.27
TNFRSF1B-202ENST00000489921 RARBP10826 455 aa23.01■■□□□ 1.27
TNFRSF1B-202ENST00000489921 STAT2P52630 851 aa23.01■■□□□ 1.27
TNFRSF1B-202ENST00000489921 NMIQ13287 307 aaPredicted RBP23.01■■□□□ 1.27
TNFRSF1B-202ENST00000489921 C1orf53Q5VUE5 145 aa23.01■■□□□ 1.27
TNFRSF1B-202ENST00000489921 ZNF467Q7Z7K2 595 aaPredicted RBP23.01■■□□□ 1.27
TNFRSF1B-202ENST00000489921 CHST13Q8NET6 341 aa23.01■■□□□ 1.27
TNFRSF1B-202ENST00000489921 STX8Q9UNK0 236 aa23.01■■□□□ 1.27
TNFRSF1B-202ENST00000489921 ATP11BQ9Y2G3 1177 aa23.01■■□□□ 1.27
TNFRSF1B-202ENST00000489921 FDX1P10109 184 aa23■■□□□ 1.27
TNFRSF1B-202ENST00000489921 AKR1A1P14550 325 aa23■■□□□ 1.27
TNFRSF1B-202ENST00000489921 SLC1A4P43007 532 aa23■■□□□ 1.27
TNFRSF1B-202ENST00000489921 TRIM60Q495X7 471 aa23■■□□□ 1.27
TNFRSF1B-202ENST00000489921 RCSD1Q6JBY9 416 aa23■■□□□ 1.27
TNFRSF1B-202ENST00000489921 B4GALNT3Q6L9W6 998 aa23■■□□□ 1.27
TNFRSF1B-202ENST00000489921 KCTD1Q719H9 257 aa23■■□□□ 1.27
TNFRSF1B-202ENST00000489921 PLEKHM2Q8IWE5 1019 aa23■■□□□ 1.27
TNFRSF1B-202ENST00000489921 EXOC6Q8TAG9 804 aa23■■□□□ 1.27
TNFRSF1B-202ENST00000489921 AGBL1Q96MI9 1066 aa23■■□□□ 1.27
TNFRSF1B-202ENST00000489921 RWDD1Q9H446 243 aaPredicted RBP23■■□□□ 1.27
TNFRSF1B-202ENST00000489921 ADCY6O43306 1168 aa22.99■■□□□ 1.27
TNFRSF1B-202ENST00000489921 RANBP6O60518 1105 aaKnown RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms