RNA–Protein interactions for RNA: ENST00000489719.1

ABCF3-217, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 4

Gene ABCF3, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-217ENST00000489719 SNRNP48Q6IEG0 339 aaKnown RBP21.06■□□□□ 0.96
ABCF3-217ENST00000489719 NECAB2Q7Z6G3 386 aa21.06■□□□□ 0.96
ABCF3-217ENST00000489719 FAM160B2Q86V87 743 aa21.06■□□□□ 0.96
ABCF3-217ENST00000489719 STAG1Q8WVM7 1258 aa21.06■□□□□ 0.96
ABCF3-217ENST00000489719 GMCL1Q96IK5 515 aa21.06■□□□□ 0.96
ABCF3-217ENST00000489719 MYH8P13535 1937 aa21.06■□□□□ 0.96
ABCF3-217ENST00000489719 RBBP6Q7Z6E9 1792 aaKnown RBP21.05■□□□□ 0.96
ABCF3-217ENST00000489719 OLFML2BQ68BL8 750 aa21.05■□□□□ 0.96
ABCF3-217ENST00000489719 RCSD1Q6JBY9 416 aa21.05■□□□□ 0.96
ABCF3-217ENST00000489719 RUFY2Q8WXA3 655 aa21.05■□□□□ 0.96
ABCF3-217ENST00000489719 PAWRQ96IZ0 340 aaKnown RBP21.05■□□□□ 0.96
ABCF3-217ENST00000489719 DSCC1Q9BVC3 393 aa21.05■□□□□ 0.96
ABCF3-217ENST00000489719 SLC38A10Q9HBR0 1119 aa21.05■□□□□ 0.96
ABCF3-217ENST00000489719 TCP11L1Q9NUJ3 509 aa21.05■□□□□ 0.96
ABCF3-217ENST00000489719 OGDHLQ9ULD0 1010 aa21.05■□□□□ 0.96
ABCF3-217ENST00000489719 MTMR7Q9Y216 660 aa21.05■□□□□ 0.96
ABCF3-217ENST00000489719 ATP2A1O14983 1001 aa21.04■□□□□ 0.96
ABCF3-217ENST00000489719 GSPT1P15170 499 aaKnown RBP21.04■□□□□ 0.96
ABCF3-217ENST00000489719 STAT2P52630 851 aa21.04■□□□□ 0.96
ABCF3-217ENST00000489719 ESR2Q92731 530 aa21.04■□□□□ 0.96
ABCF3-217ENST00000489719 RAVER2Q9HCJ3 691 aaKnown RBP21.04■□□□□ 0.96
ABCF3-217ENST00000489719 TOP1P11387 765 aaKnown RBP21.03■□□□□ 0.96
ABCF3-217ENST00000489719 NOVP48745 357 aa21.03■□□□□ 0.96
ABCF3-217ENST00000489719 IMMTQ16891 758 aaKnown RBP21.03■□□□□ 0.96
ABCF3-217ENST00000489719 DDX11Q96FC9 970 aa21.03■□□□□ 0.96
ABCF3-217ENST00000489719 TTC14Q96N46 770 aa21.03■□□□□ 0.96
ABCF3-217ENST00000489719 NBPF3Q9H094 633 aa21.03■□□□□ 0.96
ABCF3-217ENST00000489719 MSCO60682 206 aa21.02■□□□□ 0.96
ABCF3-217ENST00000489719 PLA2G6O60733 806 aa21.02■□□□□ 0.96
ABCF3-217ENST00000489719 PGK2P07205 417 aa21.02■□□□□ 0.96
ABCF3-217ENST00000489719 NT5C2P49902 561 aa21.02■□□□□ 0.96
ABCF3-217ENST00000489719 OAZ1P54368 228 aa21.02■□□□□ 0.96
ABCF3-217ENST00000489719 LHX8Q68G74 356 aa21.02■□□□□ 0.96
ABCF3-217ENST00000489719 KCTD1Q719H9 257 aa21.02■□□□□ 0.96
ABCF3-217ENST00000489719 TBC1D10CQ8IV04 446 aa21.02■□□□□ 0.96
ABCF3-217ENST00000489719 DCAF4Q8WV16 495 aa21.02■□□□□ 0.96
ABCF3-217ENST00000489719 MAML3Q96JK9 1138 aa21.02■□□□□ 0.96
ABCF3-217ENST00000489719 TMEM47Q9BQJ4 181 aa21.02■□□□□ 0.96
ABCF3-217ENST00000489719 DIS3Q9Y2L1 958 aaKnown RBP21.02■□□□□ 0.96
ABCF3-217ENST00000489719 RIPK3Q9Y572 518 aa21.02■□□□□ 0.96
ABCF3-217ENST00000489719 NR2E3Q9Y5X4 410 aa21.02■□□□□ 0.96
ABCF3-217ENST00000489719 PDE4DIPQ5VU43 2346 aa21.01■□□□□ 0.95
ABCF3-217ENST00000489719 CCDC96Q2M329 555 aa21.01■□□□□ 0.95
ABCF3-217ENST00000489719 FBXO40Q9UH90 709 aa21.01■□□□□ 0.95
ABCF3-217ENST00000489719 DDX20Q9UHI6 824 aaKnown RBP21.01■□□□□ 0.95
ABCF3-217ENST00000489719 PLXNB2O15031 1838 aa21■□□□□ 0.95
ABCF3-217ENST00000489719 CCDC178Q5BJE1 867 aa21■□□□□ 0.95
ABCF3-217ENST00000489719 CHST13Q8NET6 341 aa21■□□□□ 0.95
ABCF3-217ENST00000489719 DIS3LQ8TF46 1054 aaKnown RBP21■□□□□ 0.95
ABCF3-217ENST00000489719 C11orf49Q9H6J7 331 aa21■□□□□ 0.95
ABCF3-217ENST00000489719 BRCA2P51587 3418 aa21■□□□□ 0.95
ABCF3-217ENST00000489719 H0YGN5 161 aa20.99■□□□□ 0.95
ABCF3-217ENST00000489719 EVI5O60447 810 aa20.99■□□□□ 0.95
ABCF3-217ENST00000489719 IGHA2P01877 340 aa20.99■□□□□ 0.95
ABCF3-217ENST00000489719 CHMLP26374 656 aa20.99■□□□□ 0.95
ABCF3-217ENST00000489719 ZNF792Q3KQV3 632 aa20.99■□□□□ 0.95
ABCF3-217ENST00000489719 PRAMEF19Q5SWL8 479 aa20.99■□□□□ 0.95
ABCF3-217ENST00000489719 IQCA1Q86XH1 822 aa20.99■□□□□ 0.95
ABCF3-217ENST00000489719 ANKRD35Q8N283 1001 aa20.99■□□□□ 0.95
ABCF3-217ENST00000489719 TRPV1Q8NER1 839 aa20.99■□□□□ 0.95
ABCF3-217ENST00000489719 GREB1LQ9C091 1923 aaPredicted RBP20.99■□□□□ 0.95
ABCF3-217ENST00000489719 CYBAP13498 195 aa20.98■□□□□ 0.95
ABCF3-217ENST00000489719 DGKHQ86XP1 1220 aa20.98■□□□□ 0.95
ABCF3-217ENST00000489719 ZKSCAN3Q9BRR0 538 aa20.98■□□□□ 0.95
ABCF3-217ENST00000489719 TINF2Q9BSI4 451 aa20.98■□□□□ 0.95
ABCF3-217ENST00000489719 KRT23Q9C075 422 aa20.98■□□□□ 0.95
ABCF3-217ENST00000489719 PRR12Q9ULL5 1215 aa20.98■□□□□ 0.95
ABCF3-217ENST00000489719 RAD50Q92878 1312 aa20.98■□□□□ 0.95
ABCF3-217ENST00000489719 RLFQ13129 1914 aa20.98■□□□□ 0.95
ABCF3-217ENST00000489719 MKI67P46013 3256 aaKnown RBP20.97■□□□□ 0.95
ABCF3-217ENST00000489719 KDM4AO75164 1064 aa20.97■□□□□ 0.95
ABCF3-217ENST00000489719 AGBL1Q96MI9 1066 aa20.97■□□□□ 0.95
ABCF3-217ENST00000489719 CNNM2Q9H8M5 875 aa20.97■□□□□ 0.95
ABCF3-217ENST00000489719 GPCPD1Q9NPB8 672 aa20.97■□□□□ 0.95
ABCF3-217ENST00000489719 HOMER2Q9NSB8 354 aa20.97■□□□□ 0.95
ABCF3-217ENST00000489719 NRBP1Q9UHY1 535 aa20.97■□□□□ 0.95
ABCF3-217ENST00000489719 NEDD4P46934 1319 aa20.97■□□□□ 0.95
ABCF3-217ENST00000489719 B4E1Z4 1266 aa20.96■□□□□ 0.95
ABCF3-217ENST00000489719 SEPT4O43236 478 aa20.96■□□□□ 0.95
ABCF3-217ENST00000489719 MNX1P50219 401 aaPredicted RBP20.96■□□□□ 0.95
ABCF3-217ENST00000489719 TKFCQ3LXA3 575 aa20.96■□□□□ 0.95
ABCF3-217ENST00000489719 CCDC174Q6PII3 467 aa20.96■□□□□ 0.95
ABCF3-217ENST00000489719 ARRDC4Q8NCT1 418 aa20.96■□□□□ 0.95
ABCF3-217ENST00000489719 ZSWIM5Q9P217 1185 aa20.96■□□□□ 0.95
ABCF3-217ENST00000489719 ALAS1P13196 640 aa20.95■□□□□ 0.94
ABCF3-217ENST00000489719 SLC16A2P36021 539 aa20.95■□□□□ 0.94
ABCF3-217ENST00000489719 SNAP25P60880 206 aa20.95■□□□□ 0.94
ABCF3-217ENST00000489719 TTBK2Q6IQ55 1244 aa20.95■□□□□ 0.94
ABCF3-217ENST00000489719 BTNL9Q6UXG8 535 aa20.95■□□□□ 0.94
ABCF3-217ENST00000489719 CENPQQ7L2Z9 268 aaPredicted RBP20.95■□□□□ 0.94
ABCF3-217ENST00000489719 MSL3Q8N5Y2 521 aaKnown RBP20.95■□□□□ 0.94
ABCF3-217ENST00000489719 TRERF1Q96PN7 1200 aa20.95■□□□□ 0.94
ABCF3-217ENST00000489719 IL25Q9H293 177 aa20.95■□□□□ 0.94
ABCF3-217ENST00000489719 ACAD9Q9H845 621 aa20.95■□□□□ 0.94
ABCF3-217ENST00000489719 CNPY2Q9Y2B0 182 aa20.95■□□□□ 0.94
ABCF3-217ENST00000489719 FRMPD2Q68DX3 1309 aaPredicted RBP20.95■□□□□ 0.94
ABCF3-217ENST00000489719 DNAJC25-GNG10A0A024R161 153 aa20.94■□□□□ 0.94
ABCF3-217ENST00000489719 TRDNQ13061 729 aa20.94■□□□□ 0.94
ABCF3-217ENST00000489719 SYDE2Q5VT97 1194 aa20.94■□□□□ 0.94
ABCF3-217ENST00000489719 ANO1Q5XXA6 986 aa20.94■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 210 ms