RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 MTMR6Q9Y217 621 aa11.13□□□□□ -0.63
NOD1-208ENST00000489614 WDR33Q9C0J8 1336 aaKnown RBP11.13□□□□□ -0.63
NOD1-208ENST00000489614 STK36Q9NRP7 1315 aa11.13□□□□□ -0.63
NOD1-208ENST00000489614 CCDC69A6NI79 296 aa11.12□□□□□ -0.63
NOD1-208ENST00000489614 MAP3K10Q02779 954 aa11.12□□□□□ -0.63
NOD1-208ENST00000489614 TRDNQ13061 729 aa11.12□□□□□ -0.63
NOD1-208ENST00000489614 EFCAB13Q8IY85 973 aa11.12□□□□□ -0.63
NOD1-208ENST00000489614 TEX11Q8IYF3 940 aa11.12□□□□□ -0.63
NOD1-208ENST00000489614 MAP3K14Q99558 947 aa11.12□□□□□ -0.63
NOD1-208ENST00000489614 UBXN6Q9BZV1 441 aa11.12□□□□□ -0.63
NOD1-208ENST00000489614 DNAJC18Q9H819 358 aa11.12□□□□□ -0.63
NOD1-208ENST00000489614 POLR2AP24928 1970 aaKnown RBP11.12□□□□□ -0.63
NOD1-208ENST00000489614 FKBP1CQ5VVH2 108 aa11.12□□□□□ -0.63
NOD1-208ENST00000489614 CC2D1AQ6P1N0 951 aaPredicted RBP11.12□□□□□ -0.63
NOD1-208ENST00000489614 CARD6Q9BX69 1037 aa11.12□□□□□ -0.63
NOD1-208ENST00000489614 SPON1Q9HCB6 807 aa11.12□□□□□ -0.63
NOD1-208ENST00000489614 KLHL33A6NCF5 533 aa11.12□□□□□ -0.63
NOD1-208ENST00000489614 URI1O94763 535 aaPredicted RBP11.12□□□□□ -0.63
NOD1-208ENST00000489614 GJB2P29033 226 aa11.12□□□□□ -0.63
NOD1-208ENST00000489614 CDC27P30260 824 aa11.12□□□□□ -0.63
NOD1-208ENST00000489614 CXCL9Q07325 125 aa11.12□□□□□ -0.63
NOD1-208ENST00000489614 N4BP2L2Q92802 583 aaPredicted RBP11.12□□□□□ -0.63
NOD1-208ENST00000489614 ZSCAN10Q96SZ4 725 aaPredicted RBP11.12□□□□□ -0.63
NOD1-208ENST00000489614 ARFGAP3Q9NP61 516 aa11.12□□□□□ -0.63
NOD1-208ENST00000489614 ZNF219Q9P2Y4 722 aaPredicted RBP11.12□□□□□ -0.63
NOD1-208ENST00000489614 DNAI1Q9UI46 699 aa11.12□□□□□ -0.63
NOD1-208ENST00000489614 SPDYE2BA6NHP3 402 aa11.11□□□□□ -0.63
NOD1-208ENST00000489614 N4BP1O75113 896 aaKnown RBP11.11□□□□□ -0.63
NOD1-208ENST00000489614 SPDYE6P0CI01 402 aa11.11□□□□□ -0.63
NOD1-208ENST00000489614 SYT1P21579 422 aa11.11□□□□□ -0.63
NOD1-208ENST00000489614 RALYLQ86SE5 291 aaKnown RBP11.11□□□□□ -0.63
NOD1-208ENST00000489614 ESR2Q92731 530 aa11.11□□□□□ -0.63
NOD1-208ENST00000489614 PDE11AQ9HCR9 933 aa11.11□□□□□ -0.63
NOD1-208ENST00000489614 MCM9Q9NXL9 1143 aa11.11□□□□□ -0.63
NOD1-208ENST00000489614 A0A0G2JMZ2 1700 aa11.11□□□□□ -0.63
NOD1-208ENST00000489614 RANBP6O60518 1105 aaKnown RBP11.11□□□□□ -0.63
NOD1-208ENST00000489614 ENTPD3O75355 529 aa11.11□□□□□ -0.63
NOD1-208ENST00000489614 TROAPQ12815 778 aa11.11□□□□□ -0.63
NOD1-208ENST00000489614 NFIAQ12857 509 aa11.11□□□□□ -0.63
NOD1-208ENST00000489614 ZC3H12AQ5D1E8 599 aaKnown RBP11.11□□□□□ -0.63
NOD1-208ENST00000489614 TATDN1Q6P1N9 297 aa11.11□□□□□ -0.63
NOD1-208ENST00000489614 PLA2G4DQ86XP0 818 aa11.11□□□□□ -0.63
NOD1-208ENST00000489614 MAPKAPK5Q8IW41 473 aa11.11□□□□□ -0.63
NOD1-208ENST00000489614 KIRREL3Q8IZU9 778 aa11.11□□□□□ -0.63
NOD1-208ENST00000489614 FAM177A1Q8N128 213 aaPredicted RBP11.11□□□□□ -0.63
NOD1-208ENST00000489614 CTCFLQ8NI51 663 aaPredicted RBP11.11□□□□□ -0.63
NOD1-208ENST00000489614 PSD3Q9NYI0 1048 aa11.11□□□□□ -0.63
NOD1-208ENST00000489614 A0A087WUV0 522 aaPredicted RBP11.1□□□□□ -0.63
NOD1-208ENST00000489614 TTC36A6NLP5 189 aa11.1□□□□□ -0.63
NOD1-208ENST00000489614 JAK2O60674 1132 aa11.1□□□□□ -0.63
NOD1-208ENST00000489614 SHMT1P34896 483 aa11.1□□□□□ -0.63
NOD1-208ENST00000489614 SCNN1DP51172 638 aa11.1□□□□□ -0.63
NOD1-208ENST00000489614 SPDYE2Q495Y8 402 aa11.1□□□□□ -0.63
NOD1-208ENST00000489614 ZFPM1Q8IX07 1006 aa11.1□□□□□ -0.63
NOD1-208ENST00000489614 TMEM87AQ8NBN3 555 aa11.1□□□□□ -0.63
NOD1-208ENST00000489614 THOC1Q96FV9 657 aaKnown RBP11.1□□□□□ -0.63
NOD1-208ENST00000489614 DNAJC25Q9H1X3 360 aa11.1□□□□□ -0.63
NOD1-208ENST00000489614 L2HGDHQ9H9P8 463 aa11.1□□□□□ -0.63
NOD1-208ENST00000489614 TNKSO95271 1327 aa11.1□□□□□ -0.63
NOD1-208ENST00000489614 KLF18A0A0U1RQI7 1052 aa11.1□□□□□ -0.63
NOD1-208ENST00000489614 SKAP2O75563 359 aaPredicted RBP11.1□□□□□ -0.63
NOD1-208ENST00000489614 RPS12P25398 132 aaKnown RBP11.1□□□□□ -0.63
NOD1-208ENST00000489614 RASSF7Q02833 373 aa11.1□□□□□ -0.63
NOD1-208ENST00000489614 DNM1Q05193 864 aaKnown RBP11.1□□□□□ -0.63
NOD1-208ENST00000489614 MAP3K11Q16584 847 aa11.1□□□□□ -0.63
NOD1-208ENST00000489614 C11orf91Q3C1V1 193 aa11.1□□□□□ -0.63
NOD1-208ENST00000489614 KCNV1Q6PIU1 500 aa11.1□□□□□ -0.63
NOD1-208ENST00000489614 LRRC31Q6UY01 552 aa11.1□□□□□ -0.63
NOD1-208ENST00000489614 NEDD1Q8NHV4 660 aa11.1□□□□□ -0.63
NOD1-208ENST00000489614 DYNLL2Q96FJ2 89 aa11.1□□□□□ -0.63
NOD1-208ENST00000489614 FAN1Q9Y2M0 1017 aa11.1□□□□□ -0.63
NOD1-208ENST00000489614 LIG1P18858 919 aa11.1□□□□□ -0.63
NOD1-208ENST00000489614 USP5P45974 858 aa11.1□□□□□ -0.63
NOD1-208ENST00000489614 CDK8P49336 464 aa11.1□□□□□ -0.63
NOD1-208ENST00000489614 ZNF165P49910 485 aa11.1□□□□□ -0.63
NOD1-208ENST00000489614 CFAP100Q494V2 611 aa11.1□□□□□ -0.63
NOD1-208ENST00000489614 TMTC2Q8N394 836 aa11.1□□□□□ -0.63
NOD1-208ENST00000489614 LARGE2Q8N3Y3 721 aa11.1□□□□□ -0.63
NOD1-208ENST00000489614 PRMT6Q96LA8 375 aaPredicted RBP11.1□□□□□ -0.63
NOD1-208ENST00000489614 RABEP2Q9H5N1 569 aa11.1□□□□□ -0.63
NOD1-208ENST00000489614 USP40Q9NVE5 1235 aa11.1□□□□□ -0.63
NOD1-208ENST00000489614 MINDY4BA8MYZ0 360 aa11.09□□□□□ -0.63
NOD1-208ENST00000489614 KIF3CO14782 793 aa11.09□□□□□ -0.63
NOD1-208ENST00000489614 DDAH1O94760 285 aa11.09□□□□□ -0.63
NOD1-208ENST00000489614 ELF1P32519 619 aa11.09□□□□□ -0.63
NOD1-208ENST00000489614 ZKSCAN8Q15776 578 aaPredicted RBP11.09□□□□□ -0.63
NOD1-208ENST00000489614 DGKHQ86XP1 1220 aa11.09□□□□□ -0.63
NOD1-208ENST00000489614 NIM1KQ8IY84 436 aa11.09□□□□□ -0.63
NOD1-208ENST00000489614 SHISA4Q96DD7 197 aa11.09□□□□□ -0.63
NOD1-208ENST00000489614 ZSCAN22P10073 491 aaPredicted RBP11.09□□□□□ -0.63
NOD1-208ENST00000489614 TMEM67Q5HYA8 995 aa11.09□□□□□ -0.63
NOD1-208ENST00000489614 KIAA0825Q8IV33 1275 aa11.09□□□□□ -0.63
NOD1-208ENST00000489614 FUT8Q9BYC5 575 aa11.09□□□□□ -0.63
NOD1-208ENST00000489614 FHDC1Q9C0D6 1143 aaPredicted RBP11.09□□□□□ -0.63
NOD1-208ENST00000489614 VEZTQ9HBM0 779 aa11.09□□□□□ -0.63
NOD1-208ENST00000489614 SWAP70Q9UH65 585 aa11.09□□□□□ -0.63
NOD1-208ENST00000489614 SSC5DA1L4H1 1573 aa11.09□□□□□ -0.63
NOD1-208ENST00000489614 ZNF541Q9H0D2 1346 aa11.08□□□□□ -0.64
NOD1-208ENST00000489614 PTPDC1A2A3K4 754 aa11.08□□□□□ -0.64
NOD1-208ENST00000489614 STX6O43752 255 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms