RNA–Protein interactions for RNA: ENST00000489583.1

APTX-229, Transcript of aprataxin, humanhuman

TSL 3

Gene APTX, Length 397 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-229ENST00000489583 DCDC2CA8MYV0 355 aa23.18■■□□□ 1.3
APTX-229ENST00000489583 ERC2O15083 957 aa23.18■■□□□ 1.3
APTX-229ENST00000489583 PQBP1O60828 265 aaKnown RBP23.18■■□□□ 1.3
APTX-229ENST00000489583 SHHQ15465 462 aa23.18■■□□□ 1.3
APTX-229ENST00000489583 ANKRD35Q8N283 1001 aa23.18■■□□□ 1.3
APTX-229ENST00000489583 NUP88Q99567 741 aaPredicted RBP23.18■■□□□ 1.3
APTX-229ENST00000489583 TSEN34Q9BSV6 310 aaKnown RBP23.18■■□□□ 1.3
APTX-229ENST00000489583 FEM1BQ9UK73 627 aa23.18■■□□□ 1.3
APTX-229ENST00000489583 ZHX1Q9UKY1 873 aaPredicted RBP23.18■■□□□ 1.3
APTX-229ENST00000489583 MYH7P12883 1935 aa23.18■■□□□ 1.3
APTX-229ENST00000489583 RLFQ13129 1914 aa23.18■■□□□ 1.3
APTX-229ENST00000489583 SYNGAP1Q96PV0 1343 aa23.17■■□□□ 1.3
APTX-229ENST00000489583 GPAA1O43292 621 aa23.17■■□□□ 1.3
APTX-229ENST00000489583 NDUFB10O96000 172 aa23.17■■□□□ 1.3
APTX-229ENST00000489583 TSPY3P0CV98 308 aa23.17■■□□□ 1.3
APTX-229ENST00000489583 TSPY8P0CW00 308 aa23.17■■□□□ 1.3
APTX-229ENST00000489583 IKQ13123 557 aaPredicted RBP23.17■■□□□ 1.3
APTX-229ENST00000489583 PPP4R3BQ5MIZ7 849 aa23.17■■□□□ 1.3
APTX-229ENST00000489583 VTI1AQ96AJ9 217 aa23.17■■□□□ 1.3
APTX-229ENST00000489583 YTHDC1Q96MU7 727 aaKnown RBP23.17■■□□□ 1.3
APTX-229ENST00000489583 STARD7Q9NQZ5 370 aa23.17■■□□□ 1.3
APTX-229ENST00000489583 TMEM39AQ9NV64 488 aa23.17■■□□□ 1.3
APTX-229ENST00000489583 A0A1W2PQ45 241 aaPredicted RBP23.16■■□□□ 1.3
APTX-229ENST00000489583 A0A1W2PQY0 241 aa23.16■■□□□ 1.3
APTX-229ENST00000489583 TTLL1O95922 423 aa23.16■■□□□ 1.3
APTX-229ENST00000489583 OSBP2Q969R2 916 aa23.16■■□□□ 1.3
APTX-229ENST00000489583 SYNPO2Q9UMS6 1093 aa23.16■■□□□ 1.3
APTX-229ENST00000489583 MOXD2PA6NHM9 499 aa23.15■■□□□ 1.3
APTX-229ENST00000489583 PATL2C9JE40 543 aaKnown RBP23.15■■□□□ 1.3
APTX-229ENST00000489583 ZNF865P0CJ78 1059 aaPredicted RBP23.15■■□□□ 1.3
APTX-229ENST00000489583 FDX1P10109 184 aa23.15■■□□□ 1.3
APTX-229ENST00000489583 TAL1P17542 331 aaPredicted RBP23.15■■□□□ 1.3
APTX-229ENST00000489583 SMAD3P84022 425 aaKnown RBP23.15■■□□□ 1.3
APTX-229ENST00000489583 REPS2Q8NFH8 660 aa23.15■■□□□ 1.3
APTX-229ENST00000489583 RNPC3Q96LT9 517 aaKnown RBP23.15■■□□□ 1.3
APTX-229ENST00000489583 ROBO3Q96MS0 1386 aa23.14■■□□□ 1.3
APTX-229ENST00000489583 MROH7Q68CQ1 1323 aa23.14■■□□□ 1.3
APTX-229ENST00000489583 TRIM43BA6NCK2 446 aa23.14■■□□□ 1.29
APTX-229ENST00000489583 ATP2A1O14983 1001 aa23.14■■□□□ 1.29
APTX-229ENST00000489583 CCDC174Q6PII3 467 aa23.14■■□□□ 1.29
APTX-229ENST00000489583 SH3RF1Q7Z6J0 888 aa23.14■■□□□ 1.29
APTX-229ENST00000489583 PCSK9Q8NBP7 692 aaKnown RBP23.14■■□□□ 1.29
APTX-229ENST00000489583 CHST13Q8NET6 341 aa23.14■■□□□ 1.29
APTX-229ENST00000489583 TRIM43Q96BQ3 446 aaPredicted RBP23.14■■□□□ 1.29
APTX-229ENST00000489583 GLT1D1Q96MS3 346 aa23.14■■□□□ 1.29
APTX-229ENST00000489583 GNL3Q9BVP2 549 aaKnown RBP eCLIP23.14■■□□□ 1.29
APTX-229ENST00000489583 NAPBQ9H115 298 aa23.14■■□□□ 1.29
APTX-229ENST00000489583 DCTPP1Q9H773 170 aa23.14■■□□□ 1.29
APTX-229ENST00000489583 PRDM1O75626 825 aa23.13■■□□□ 1.29
APTX-229ENST00000489583 ACLYP53396 1101 aa23.13■■□□□ 1.29
APTX-229ENST00000489583 OAZ1P54368 228 aa23.13■■□□□ 1.29
APTX-229ENST00000489583 FPGSQ05932 587 aa23.13■■□□□ 1.29
APTX-229ENST00000489583 C9orf50Q5SZB4 431 aa23.13■■□□□ 1.29
APTX-229ENST00000489583 C20orf194Q5TEA3 1177 aa23.13■■□□□ 1.29
APTX-229ENST00000489583 ZNF467Q7Z7K2 595 aaPredicted RBP23.13■■□□□ 1.29
APTX-229ENST00000489583 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.13■■□□□ 1.29
APTX-229ENST00000489583 CEP95Q96GE4 821 aa23.13■■□□□ 1.29
APTX-229ENST00000489583 GUCD1Q96NT3 240 aa23.13■■□□□ 1.29
APTX-229ENST00000489583 FSD1Q9BTV5 496 aa23.13■■□□□ 1.29
APTX-229ENST00000489583 RAVER2Q9HCJ3 691 aaKnown RBP23.13■■□□□ 1.29
APTX-229ENST00000489583 MTMR4Q9NYA4 1195 aa23.13■■□□□ 1.29
APTX-229ENST00000489583 ZNFX1Q9P2E3 1918 aaKnown RBP23.13■■□□□ 1.29
APTX-229ENST00000489583 COL11A1P12107 1806 aaPredicted RBP23.12■■□□□ 1.29
APTX-229ENST00000489583 A0A0C4DFX4 3053 aa23.12■■□□□ 1.29
APTX-229ENST00000489583 DUSP11O75319 330 aaKnown RBP23.12■■□□□ 1.29
APTX-229ENST00000489583 C6orf222P0C671 652 aaPredicted RBP23.12■■□□□ 1.29
APTX-229ENST00000489583 BMP3P12645 472 aa23.12■■□□□ 1.29
APTX-229ENST00000489583 ACVR2BQ13705 512 aa23.12■■□□□ 1.29
APTX-229ENST00000489583 MAMDC4Q6UXC1 1216 aa23.12■■□□□ 1.29
APTX-229ENST00000489583 IFNL3Q8IZI9 196 aa23.12■■□□□ 1.29
APTX-229ENST00000489583 GMCL1P1Q8NEA9 526 aa23.12■■□□□ 1.29
APTX-229ENST00000489583 CHURC1Q8WUH1 139 aa23.12■■□□□ 1.29
APTX-229ENST00000489583 MKL1Q969V6 931 aa23.12■■□□□ 1.29
APTX-229ENST00000489583 TOX2Q96NM4 488 aa23.12■■□□□ 1.29
APTX-229ENST00000489583 ABHD16BQ9H3Z7 469 aa23.12■■□□□ 1.29
APTX-229ENST00000489583 SLC38A10Q9HBR0 1119 aa23.12■■□□□ 1.29
APTX-229ENST00000489583 TTC41PQ6P2S7 1318 aa23.11■■□□□ 1.29
APTX-229ENST00000489583 SYNRGQ9UMZ2 1314 aa23.11■■□□□ 1.29
APTX-229ENST00000489583 STAT2P52630 851 aa23.11■■□□□ 1.29
APTX-229ENST00000489583 KCNA10Q16322 511 aa23.11■■□□□ 1.29
APTX-229ENST00000489583 TSHZ3Q63HK5 1081 aa23.11■■□□□ 1.29
APTX-229ENST00000489583 SLFN13Q68D06 897 aa23.11■■□□□ 1.29
APTX-229ENST00000489583 NOL8Q76FK4 1167 aaKnown RBP23.11■■□□□ 1.29
APTX-229ENST00000489583 HOMER2Q9NSB8 354 aa23.11■■□□□ 1.29
APTX-229ENST00000489583 PARP14Q460N5 1801 aa23.1■■□□□ 1.29
APTX-229ENST00000489583 KIAA0355O15063 1070 aa23.1■■□□□ 1.29
APTX-229ENST00000489583 FAM160B2Q86V87 743 aa23.1■■□□□ 1.29
APTX-229ENST00000489583 LRRC47Q8N1G4 583 aaKnown RBP23.1■■□□□ 1.29
APTX-229ENST00000489583 LENG1Q96BZ8 264 aaPredicted RBP23.1■■□□□ 1.29
APTX-229ENST00000489583 CDX2Q99626 313 aaPredicted RBP23.1■■□□□ 1.29
APTX-229ENST00000489583 SEMA6BQ9H3T3 888 aa23.1■■□□□ 1.29
APTX-229ENST00000489583 CDKN2AIPQ9NXV6 580 aaPredicted RBP23.1■■□□□ 1.29
APTX-229ENST00000489583 RIPK3Q9Y572 518 aa23.1■■□□□ 1.29
APTX-229ENST00000489583 PLXNA1Q9UIW2 1896 aa23.09■■□□□ 1.29
APTX-229ENST00000489583 TMEM232C9JQI7 657 aa23.09■■□□□ 1.29
APTX-229ENST00000489583 M0R2C6 588 aa23.09■■□□□ 1.29
APTX-229ENST00000489583 TLR3O15455 904 aaKnown RBP23.09■■□□□ 1.29
APTX-229ENST00000489583 ADAMTS4O75173 837 aa23.09■■□□□ 1.29
APTX-229ENST00000489583 SLC1A4P43007 532 aa23.09■■□□□ 1.29
APTX-229ENST00000489583 ANKRD33Q7Z3H0 272 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms