RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 ADD1P35611 737 aaKnown RBP16.12■□□□□ 0.17
C9orf3-221ENST00000489562 CATSPERGQ6ZRH7 1159 aa16.12■□□□□ 0.17
C9orf3-221ENST00000489562 ANKRD23Q86SG2 305 aa16.12■□□□□ 0.17
C9orf3-221ENST00000489562 TRIM22Q8IYM9 498 aa16.12■□□□□ 0.17
C9orf3-221ENST00000489562 PRPF38AQ8NAV1 312 aaKnown RBP16.12■□□□□ 0.17
C9orf3-221ENST00000489562 BRI3BPQ8WY22 251 aa16.12■□□□□ 0.17
C9orf3-221ENST00000489562 INTS4Q96HW7 963 aaKnown RBP16.12■□□□□ 0.17
C9orf3-221ENST00000489562 CAPNS2Q96L46 248 aa16.12■□□□□ 0.17
C9orf3-221ENST00000489562 SLF1Q9BQI6 1058 aa16.12■□□□□ 0.17
C9orf3-221ENST00000489562 PNMA3Q9UL41 463 aa16.12■□□□□ 0.17
C9orf3-221ENST00000489562 A0A0G2JMZ2 1700 aa16.11■□□□□ 0.17
C9orf3-221ENST00000489562 FLOT1O75955 427 aa16.11■□□□□ 0.17
C9orf3-221ENST00000489562 PLEKHA8P1O95397 391 aa16.11■□□□□ 0.17
C9orf3-221ENST00000489562 OSBPP22059 807 aa16.11■□□□□ 0.17
C9orf3-221ENST00000489562 IRX3P78415 501 aaPredicted RBP16.11■□□□□ 0.17
C9orf3-221ENST00000489562 HMGN5P82970 282 aaKnown RBP16.11■□□□□ 0.17
C9orf3-221ENST00000489562 ST3GAL1Q11201 340 aa16.11■□□□□ 0.17
C9orf3-221ENST00000489562 DGKZQ13574 1117 aa16.11■□□□□ 0.17
C9orf3-221ENST00000489562 COG2Q14746 738 aa16.11■□□□□ 0.17
C9orf3-221ENST00000489562 NTRK3Q16288 839 aa16.11■□□□□ 0.17
C9orf3-221ENST00000489562 TREML2Q5T2D2 321 aa16.11■□□□□ 0.17
C9orf3-221ENST00000489562 SYDE2Q5VT97 1194 aa16.11■□□□□ 0.17
C9orf3-221ENST00000489562 OTUD7BQ6GQQ9 843 aa16.11■□□□□ 0.17
C9orf3-221ENST00000489562 TTBK2Q6IQ55 1244 aa16.11■□□□□ 0.17
C9orf3-221ENST00000489562 CYP4F22Q6NT55 531 aa16.11■□□□□ 0.17
C9orf3-221ENST00000489562 SRBD1Q8N5C6 995 aaKnown RBP16.11■□□□□ 0.17
C9orf3-221ENST00000489562 RNF26Q9BY78 433 aaPredicted RBP16.11■□□□□ 0.17
C9orf3-221ENST00000489562 RIOX1Q9H6W3 641 aa16.11■□□□□ 0.17
C9orf3-221ENST00000489562 HOXC10Q9NYD6 342 aa16.11■□□□□ 0.17
C9orf3-221ENST00000489562 PPP1R9AQ9ULJ8 1098 aa16.11■□□□□ 0.17
C9orf3-221ENST00000489562 CNTNAP5Q8WYK1 1306 aa16.11■□□□□ 0.17
C9orf3-221ENST00000489562 STK36Q9NRP7 1315 aa16.11■□□□□ 0.17
C9orf3-221ENST00000489562 THSD7BQ9C0I4 1608 aa16.11■□□□□ 0.17
C9orf3-221ENST00000489562 HSP90AA1P07900 732 aaKnown RBP16.1■□□□□ 0.17
C9orf3-221ENST00000489562 HSPA6P17066 643 aa16.1■□□□□ 0.17
C9orf3-221ENST00000489562 AKAP17AQ02040 695 aaKnown RBP16.1■□□□□ 0.17
C9orf3-221ENST00000489562 SSRP1Q08945 709 aaKnown RBP16.1■□□□□ 0.17
C9orf3-221ENST00000489562 FUT2Q10981 343 aa16.1■□□□□ 0.17
C9orf3-221ENST00000489562 GPAT2Q6NUI2 795 aa16.1■□□□□ 0.17
C9orf3-221ENST00000489562 NSUN7Q8NE18 718 aaKnown RBP16.1■□□□□ 0.17
C9orf3-221ENST00000489562 GTF3C2Q8WUA4 911 aaPredicted RBP16.1■□□□□ 0.17
C9orf3-221ENST00000489562 RRP36Q96EU6 259 aaKnown RBP16.1■□□□□ 0.17
C9orf3-221ENST00000489562 UBA5Q9GZZ9 404 aa16.1■□□□□ 0.17
C9orf3-221ENST00000489562 DAXXQ9UER7 740 aaPredicted RBP16.1■□□□□ 0.17
C9orf3-221ENST00000489562 PNMA2Q9UL42 364 aa16.1■□□□□ 0.17
C9orf3-221ENST00000489562 PRR12Q9ULL5 1215 aa16.1■□□□□ 0.17
C9orf3-221ENST00000489562 KIF3AQ9Y496 699 aa16.1■□□□□ 0.17
C9orf3-221ENST00000489562 BTBD19C9JJ37 291 aa16.09■□□□□ 0.17
C9orf3-221ENST00000489562 PRPF3O43395 683 aaKnown RBP16.09■□□□□ 0.17
C9orf3-221ENST00000489562 FMNL1O95466 1100 aaPredicted RBP16.09■□□□□ 0.17
C9orf3-221ENST00000489562 DSG3P32926 999 aa16.09■□□□□ 0.17
C9orf3-221ENST00000489562 SLC16A2P36021 539 aa16.09■□□□□ 0.17
C9orf3-221ENST00000489562 TRAF1Q13077 416 aa16.09■□□□□ 0.17
C9orf3-221ENST00000489562 NBPF11Q86T75 865 aa16.09■□□□□ 0.17
C9orf3-221ENST00000489562 ADGRF4Q8IZF3 695 aa16.09■□□□□ 0.17
C9orf3-221ENST00000489562 MTMR8Q96EF0 704 aa16.09■□□□□ 0.17
C9orf3-221ENST00000489562 SEC63Q9UGP8 760 aaKnown RBP16.09■□□□□ 0.17
C9orf3-221ENST00000489562 PTPDC1A2A3K4 754 aa16.08■□□□□ 0.16
C9orf3-221ENST00000489562 PDHXO00330 501 aa16.08■□□□□ 0.16
C9orf3-221ENST00000489562 CYTH3O43739 400 aa16.08■□□□□ 0.16
C9orf3-221ENST00000489562 DEXIO95424 95 aa16.08■□□□□ 0.16
C9orf3-221ENST00000489562 CTDNEP1O95476 244 aa16.08■□□□□ 0.16
C9orf3-221ENST00000489562 MAP2K2P36507 400 aa16.08■□□□□ 0.16
C9orf3-221ENST00000489562 TM4SF4P48230 202 aa16.08■□□□□ 0.16
C9orf3-221ENST00000489562 LBX2Q6XYB7 198 aa16.08■□□□□ 0.16
C9orf3-221ENST00000489562 CMTR1Q8N1G2 835 aaKnown RBP16.08■□□□□ 0.16
C9orf3-221ENST00000489562 MB21D1Q8N884 522 aa16.08■□□□□ 0.16
C9orf3-221ENST00000489562 SMARCC2Q8TAQ2 1214 aa16.08■□□□□ 0.16
C9orf3-221ENST00000489562 WASF1Q92558 559 aa16.08■□□□□ 0.16
C9orf3-221ENST00000489562 KIFC2Q96AC6 838 aa16.08■□□□□ 0.16
C9orf3-221ENST00000489562 PARK7Q99497 189 aaKnown RBP16.08■□□□□ 0.16
C9orf3-221ENST00000489562 SLC26A6Q9BXS9 759 aa16.08■□□□□ 0.16
C9orf3-221ENST00000489562 ASCC2Q9H1I8 757 aaPredicted RBP16.08■□□□□ 0.16
C9orf3-221ENST00000489562 JMJD4Q9H9V9 463 aa16.08■□□□□ 0.16
C9orf3-221ENST00000489562 FBXO28Q9NVF7 368 aa16.08■□□□□ 0.16
C9orf3-221ENST00000489562 ADAMTS5Q9UNA0 930 aa16.08■□□□□ 0.16
C9orf3-221ENST00000489562 SMC3Q9UQE7 1217 aa16.08■□□□□ 0.16
C9orf3-221ENST00000489562 WDR33Q9C0J8 1336 aaKnown RBP16.08■□□□□ 0.16
C9orf3-221ENST00000489562 SPDYE16A6NNV3 312 aaPredicted RBP16.07■□□□□ 0.16
C9orf3-221ENST00000489562 hCG_1984214I3L0E3 225 aa16.07■□□□□ 0.16
C9orf3-221ENST00000489562 ZBTB5O15062 677 aa16.07■□□□□ 0.16
C9orf3-221ENST00000489562 ZBED4O75132 1171 aa16.07■□□□□ 0.16
C9orf3-221ENST00000489562 KIF23Q02241 960 aaPredicted RBP16.07■□□□□ 0.16
C9orf3-221ENST00000489562 GRM1Q13255 1194 aa16.07■□□□□ 0.16
C9orf3-221ENST00000489562 IFNL1Q8IU54 200 aa16.07■□□□□ 0.16
C9orf3-221ENST00000489562 FAM177A1Q8N128 213 aaPredicted RBP16.07■□□□□ 0.16
C9orf3-221ENST00000489562 CCDC82Q8N4S0 544 aa16.07■□□□□ 0.16
C9orf3-221ENST00000489562 ZNF713Q8N859 430 aaPredicted RBP16.07■□□□□ 0.16
C9orf3-221ENST00000489562 PHKBQ93100 1093 aa16.07■□□□□ 0.16
C9orf3-221ENST00000489562 RANBP17Q9H2T7 1088 aaKnown RBP16.07■□□□□ 0.16
C9orf3-221ENST00000489562 CPVLQ9H3G5 476 aa16.07■□□□□ 0.16
C9orf3-221ENST00000489562 ORC3Q9UBD5 711 aaPredicted RBP16.07■□□□□ 0.16
C9orf3-221ENST00000489562 CTDP1Q9Y5B0 961 aaPredicted RBP16.07■□□□□ 0.16
C9orf3-221ENST00000489562 V9GY48 417 aaPredicted RBP16.07■□□□□ 0.16
C9orf3-221ENST00000489562 PNMA6FA0A0J9YX94 578 aa16.06■□□□□ 0.16
C9orf3-221ENST00000489562 VWA5AO00534 786 aa16.06■□□□□ 0.16
C9orf3-221ENST00000489562 ALDH1A1P00352 501 aa16.06■□□□□ 0.16
C9orf3-221ENST00000489562 OAZ1P54368 228 aa16.06■□□□□ 0.16
C9orf3-221ENST00000489562 HERVK_113P62684 666 aa16.06■□□□□ 0.16
C9orf3-221ENST00000489562 CDC37Q16543 378 aaPredicted RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms