RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 HOXD8P13378 290 aaPredicted RBP9.47□□□□□ -0.89
SMC6-209ENST00000489535 GSPT1P15170 499 aaKnown RBP9.47□□□□□ -0.89
SMC6-209ENST00000489535 MX1P20591 662 aa9.47□□□□□ -0.89
SMC6-209ENST00000489535 RFC4P35249 363 aa9.47□□□□□ -0.89
SMC6-209ENST00000489535 PDE1AP54750 535 aa9.47□□□□□ -0.89
SMC6-209ENST00000489535 CCDC57Q2TAC2 916 aa9.47□□□□□ -0.89
SMC6-209ENST00000489535 TBC1D9BQ66K14 1250 aa9.47□□□□□ -0.89
SMC6-209ENST00000489535 AMIGO3Q86WK7 504 aa9.47□□□□□ -0.89
SMC6-209ENST00000489535 CLASRPQ8N2M8 674 aaKnown RBP9.47□□□□□ -0.89
SMC6-209ENST00000489535 USP42Q9H9J4 1324 aaKnown RBP9.47□□□□□ -0.89
SMC6-209ENST00000489535 CHD4Q14839 1912 aa9.46□□□□□ -0.89
SMC6-209ENST00000489535 COL11A2P13942 1736 aaPredicted RBP9.46□□□□□ -0.89
SMC6-209ENST00000489535 TM4SF5O14894 197 aa9.46□□□□□ -0.9
SMC6-209ENST00000489535 GHRHP01286 108 aa9.46□□□□□ -0.9
SMC6-209ENST00000489535 HMGB2P26583 209 aaKnown RBP9.46□□□□□ -0.9
SMC6-209ENST00000489535 CTSWP56202 376 aa9.46□□□□□ -0.9
SMC6-209ENST00000489535 DGKZQ13574 1117 aa9.46□□□□□ -0.9
SMC6-209ENST00000489535 TAF7LQ5H9L4 462 aa9.46□□□□□ -0.9
SMC6-209ENST00000489535 LCE4AQ5TA78 99 aa9.46□□□□□ -0.9
SMC6-209ENST00000489535 TSHZ3Q63HK5 1081 aa9.46□□□□□ -0.9
SMC6-209ENST00000489535 ABI1Q8IZP0 508 aa9.46□□□□□ -0.9
SMC6-209ENST00000489535 TTLL11Q8NHH1 800 aa9.46□□□□□ -0.9
SMC6-209ENST00000489535 MYRFLQ96LU7 910 aa9.46□□□□□ -0.9
SMC6-209ENST00000489535 NSUN5Q96P11 429 aaKnown RBP9.46□□□□□ -0.9
SMC6-209ENST00000489535 STAP2Q9UGK3 403 aa9.46□□□□□ -0.9
SMC6-209ENST00000489535 AOX1Q06278 1338 aa9.46□□□□□ -0.9
SMC6-209ENST00000489535 ZNF609O15014 1411 aa9.46□□□□□ -0.9
SMC6-209ENST00000489535 LAMA4Q16363 1823 aa9.45□□□□□ -0.9
SMC6-209ENST00000489535 ANKRD18BA2A2Z9 1011 aa9.45□□□□□ -0.9
SMC6-209ENST00000489535 IFIT2P09913 472 aaKnown RBP9.45□□□□□ -0.9
SMC6-209ENST00000489535 HCLS1P14317 486 aaPredicted RBP9.45□□□□□ -0.9
SMC6-209ENST00000489535 HSP90B1P14625 803 aaKnown RBP9.45□□□□□ -0.9
SMC6-209ENST00000489535 SSFA2P28290 1259 aa9.45□□□□□ -0.9
SMC6-209ENST00000489535 SEC13P55735 322 aa9.45□□□□□ -0.9
SMC6-209ENST00000489535 TFCP2Q12800 502 aa9.45□□□□□ -0.9
SMC6-209ENST00000489535 IFIT5Q13325 482 aaKnown RBP9.45□□□□□ -0.9
SMC6-209ENST00000489535 ACAD11Q709F0 780 aa9.45□□□□□ -0.9
SMC6-209ENST00000489535 AACSQ86V21 672 aa9.45□□□□□ -0.9
SMC6-209ENST00000489535 SHKBP1Q8TBC3 707 aa9.45□□□□□ -0.9
SMC6-209ENST00000489535 NYXQ9GZU5 481 aa9.45□□□□□ -0.9
SMC6-209ENST00000489535 CCDC8Q9H0W5 538 aaPredicted RBP9.45□□□□□ -0.9
SMC6-209ENST00000489535 MUC3BQ9H195 1237 aa9.45□□□□□ -0.9
SMC6-209ENST00000489535 KCNK4Q9NYG8 393 aa9.45□□□□□ -0.9
SMC6-209ENST00000489535 USP20Q9Y2K6 914 aa9.45□□□□□ -0.9
SMC6-209ENST00000489535 PPME1Q9Y570 386 aa9.45□□□□□ -0.9
SMC6-209ENST00000489535 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP9.45□□□□□ -0.9
SMC6-209ENST00000489535 EYA2O00167 538 aa9.44□□□□□ -0.9
SMC6-209ENST00000489535 OPLAHO14841 1288 aa9.44□□□□□ -0.9
SMC6-209ENST00000489535 MMP20O60882 483 aa9.44□□□□□ -0.9
SMC6-209ENST00000489535 CDC45O75419 566 aa9.44□□□□□ -0.9
SMC6-209ENST00000489535 C8AP07357 584 aa9.44□□□□□ -0.9
SMC6-209ENST00000489535 PSAPP07602 524 aa9.44□□□□□ -0.9
SMC6-209ENST00000489535 IGFBP4P22692 258 aa9.44□□□□□ -0.9
SMC6-209ENST00000489535 IL15P40933 162 aaPredicted RBP9.44□□□□□ -0.9
SMC6-209ENST00000489535 LRRC24Q50LG9 513 aa9.44□□□□□ -0.9
SMC6-209ENST00000489535 ATG9AQ7Z3C6 839 aa9.44□□□□□ -0.9
SMC6-209ENST00000489535 EAF2Q96CJ1 260 aaPredicted RBP9.44□□□□□ -0.9
SMC6-209ENST00000489535 GPATCH3Q96I76 525 aa9.44□□□□□ -0.9
SMC6-209ENST00000489535 SETDB2Q96T68 719 aa9.44□□□□□ -0.9
SMC6-209ENST00000489535 PUS3Q9BZE2 481 aaKnown RBP9.44□□□□□ -0.9
SMC6-209ENST00000489535 GREM2Q9H772 168 aa9.44□□□□□ -0.9
SMC6-209ENST00000489535 TTC41PQ6P2S7 1318 aa9.44□□□□□ -0.9
SMC6-209ENST00000489535 ABCC12Q96J65 1359 aa9.44□□□□□ -0.9
SMC6-209ENST00000489535 RIC1Q4ADV7 1423 aa9.44□□□□□ -0.9
SMC6-209ENST00000489535 LRRC37AA6NMS7 1700 aa9.44□□□□□ -0.9
SMC6-209ENST00000489535 DLEC1Q9Y238 1755 aa9.44□□□□□ -0.9
SMC6-209ENST00000489535 CARMIL3Q8ND23 1372 aa9.43□□□□□ -0.9
SMC6-209ENST00000489535 CIAO1O76071 339 aa9.43□□□□□ -0.9
SMC6-209ENST00000489535 SDSP20132 328 aa9.43□□□□□ -0.9
SMC6-209ENST00000489535 CD68P34810 354 aaPredicted RBP9.43□□□□□ -0.9
SMC6-209ENST00000489535 SOX18P35713 384 aa9.43□□□□□ -0.9
SMC6-209ENST00000489535 TNNI3KQ59H18 835 aa9.43□□□□□ -0.9
SMC6-209ENST00000489535 KIAA1211Q6ZU35 1233 aa9.43□□□□□ -0.9
SMC6-209ENST00000489535 CACTIN-AS1Q8N1I8 211 aa9.43□□□□□ -0.9
SMC6-209ENST00000489535 PI4K2BQ8TCG2 481 aa9.43□□□□□ -0.9
SMC6-209ENST00000489535 FPGT-TNNI3KV9GXZ4 949 aa9.43□□□□□ -0.9
SMC6-209ENST00000489535 RTL9Q8NET4 1388 aa9.42□□□□□ -0.9
SMC6-209ENST00000489535 POM121CA8CG34 1229 aa9.42□□□□□ -0.9
SMC6-209ENST00000489535 LINC01387J3KSC0 135 aa9.42□□□□□ -0.9
SMC6-209ENST00000489535 ERC2O15083 957 aa9.42□□□□□ -0.9
SMC6-209ENST00000489535 XYLBO75191 536 aa9.42□□□□□ -0.9
SMC6-209ENST00000489535 LGR5O75473 907 aa9.42□□□□□ -0.9
SMC6-209ENST00000489535 MFAP1P55081 439 aaKnown RBP9.42□□□□□ -0.9
SMC6-209ENST00000489535 ZNF827Q17R98 1081 aa9.42□□□□□ -0.9
SMC6-209ENST00000489535 CCDC152Q4G0S7 254 aa9.42□□□□□ -0.9
SMC6-209ENST00000489535 NBPF5PQ86XG9 351 aaPredicted RBP9.42□□□□□ -0.9
SMC6-209ENST00000489535 CLEC10AQ8IUN9 316 aa9.42□□□□□ -0.9
SMC6-209ENST00000489535 POU5F2Q8N7G0 328 aa9.42□□□□□ -0.9
SMC6-209ENST00000489535 RILPL2Q969X0 211 aa9.42□□□□□ -0.9
SMC6-209ENST00000489535 RBSNQ9H1K0 784 aa9.42□□□□□ -0.9
SMC6-209ENST00000489535 ECHDC1Q9NTX5 307 aa9.42□□□□□ -0.9
SMC6-209ENST00000489535 KIF13BQ9NQT8 1826 aa9.41□□□□□ -0.9
SMC6-209ENST00000489535 NPHP1O15259 732 aa9.41□□□□□ -0.9
SMC6-209ENST00000489535 GLRX3O76003 335 aaKnown RBP9.41□□□□□ -0.9
SMC6-209ENST00000489535 MAP4K4O95819 1239 aaPredicted RBP9.41□□□□□ -0.9
SMC6-209ENST00000489535 GYS1P13807 737 aa9.41□□□□□ -0.9
SMC6-209ENST00000489535 HOXA10P31260 410 aaPredicted RBP9.41□□□□□ -0.9
SMC6-209ENST00000489535 NFIXQ14938 502 aa9.41□□□□□ -0.9
SMC6-209ENST00000489535 SLC10A5Q5PT55 438 aa9.41□□□□□ -0.9
SMC6-209ENST00000489535 TPTE2Q6XPS3 522 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms