RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 FAM173BQ6P4H8 233 aa24.07■■□□□ 1.44
SND1-214ENST00000489417 BRAPQ7Z569 592 aa24.07■■□□□ 1.44
SND1-214ENST00000489417 FAM177A1Q8N128 213 aaPredicted RBP24.07■■□□□ 1.44
SND1-214ENST00000489417 LPAR1Q92633 364 aa24.07■■□□□ 1.44
SND1-214ENST00000489417 BARHL2Q9NY43 387 aa24.07■■□□□ 1.44
SND1-214ENST00000489417 ZHX2Q9Y6X8 837 aa24.07■■□□□ 1.44
SND1-214ENST00000489417 DDX11L8A8MPP1 907 aa24.06■■□□□ 1.44
SND1-214ENST00000489417 STXBP3O00186 592 aa24.06■■□□□ 1.44
SND1-214ENST00000489417 USP14P54578 494 aa24.06■■□□□ 1.44
SND1-214ENST00000489417 MTMR2Q13614 643 aa24.06■■□□□ 1.44
SND1-214ENST00000489417 MAP3K11Q16584 847 aa24.06■■□□□ 1.44
SND1-214ENST00000489417 DIS3L2Q8IYB7 885 aaKnown RBP24.06■■□□□ 1.44
SND1-214ENST00000489417 ZNF526Q8TF50 670 aaPredicted RBP24.06■■□□□ 1.44
SND1-214ENST00000489417 PNMA6FA0A0J9YX94 578 aa24.05■■□□□ 1.44
SND1-214ENST00000489417 hCG_1984214I3L0E3 225 aa24.05■■□□□ 1.44
SND1-214ENST00000489417 WDR46O15213 610 aaKnown RBP24.05■■□□□ 1.44
SND1-214ENST00000489417 NLRP5P59047 1200 aa24.05■■□□□ 1.44
SND1-214ENST00000489417 ARMC9Q7Z3E5 817 aa24.05■■□□□ 1.44
SND1-214ENST00000489417 ZNF713Q8N859 430 aaPredicted RBP24.05■■□□□ 1.44
SND1-214ENST00000489417 CCDC148Q8NFR7 591 aa24.05■■□□□ 1.44
SND1-214ENST00000489417 PHIPQ8WWQ0 1821 aa24.05■■□□□ 1.44
SND1-214ENST00000489417 BAZ2BQ9UIF8 2168 aaKnown RBP24.04■■□□□ 1.44
SND1-214ENST00000489417 ZBTB5O15062 677 aa24.04■■□□□ 1.44
SND1-214ENST00000489417 PLA2G6O60733 806 aa24.04■■□□□ 1.44
SND1-214ENST00000489417 NCLP19338 710 aaKnown RBP24.04■■□□□ 1.44
SND1-214ENST00000489417 U2AF2P26368 475 aaKnown RBP eCLIP24.04■■□□□ 1.44
SND1-214ENST00000489417 CALML3P27482 149 aa24.04■■□□□ 1.44
SND1-214ENST00000489417 KRT2P35908 639 aa24.04■■□□□ 1.44
SND1-214ENST00000489417 STAT2P52630 851 aa24.04■■□□□ 1.44
SND1-214ENST00000489417 BACE1P56817 501 aa24.04■■□□□ 1.44
SND1-214ENST00000489417 FAM160B2Q86V87 743 aa24.04■■□□□ 1.44
SND1-214ENST00000489417 ANKRD13AQ8IZ07 590 aa24.04■■□□□ 1.44
SND1-214ENST00000489417 CHURC1Q8WUH1 139 aa24.04■■□□□ 1.44
SND1-214ENST00000489417 FOXP1Q9H334 677 aaPredicted RBP24.04■■□□□ 1.44
SND1-214ENST00000489417 BRMS1Q9HCU9 246 aa24.04■■□□□ 1.44
SND1-214ENST00000489417 CNPY2Q9Y2B0 182 aa24.04■■□□□ 1.44
SND1-214ENST00000489417 TRIM75PA6NK02 468 aa24.03■■□□□ 1.44
SND1-214ENST00000489417 BTBD18B2RXH4 712 aa24.03■■□□□ 1.44
SND1-214ENST00000489417 TRAF5O00463 557 aa24.03■■□□□ 1.44
SND1-214ENST00000489417 KRT85P78386 507 aa24.03■■□□□ 1.44
SND1-214ENST00000489417 TYW1BQ6NUM6 668 aa24.03■■□□□ 1.44
SND1-214ENST00000489417 MOB2Q70IA6 237 aa24.03■■□□□ 1.44
SND1-214ENST00000489417 CCDC12Q8WUD4 166 aaPredicted RBP24.03■■□□□ 1.44
SND1-214ENST00000489417 EMILIN3Q9NT22 766 aa24.03■■□□□ 1.44
SND1-214ENST00000489417 FEM1BQ9UK73 627 aa24.03■■□□□ 1.44
SND1-214ENST00000489417 C19orf81C9J6K1 198 aa24.02■■□□□ 1.44
SND1-214ENST00000489417 NAPAP54920 295 aa24.02■■□□□ 1.44
SND1-214ENST00000489417 NPY5RQ15761 445 aa24.02■■□□□ 1.44
SND1-214ENST00000489417 CDC37Q16543 378 aaPredicted RBP24.02■■□□□ 1.44
SND1-214ENST00000489417 QRICH1Q2TAL8 776 aa24.02■■□□□ 1.44
SND1-214ENST00000489417 OXER1Q8TDS5 423 aa24.02■■□□□ 1.44
SND1-214ENST00000489417 ZNF396Q96N95 335 aaPredicted RBP24.02■■□□□ 1.44
SND1-214ENST00000489417 PRR12Q9ULL5 1215 aa24.02■■□□□ 1.44
SND1-214ENST00000489417 AFG3L2Q9Y4W6 797 aa24.02■■□□□ 1.44
SND1-214ENST00000489417 MYH15Q9Y2K3 1946 aa24.02■■□□□ 1.44
SND1-214ENST00000489417 ATL3Q6DD88 541 aa24.01■■□□□ 1.43
SND1-214ENST00000489417 GALNT17Q6IS24 598 aa24.01■■□□□ 1.43
SND1-214ENST00000489417 NOSTRINQ8IVI9 506 aa24.01■■□□□ 1.43
SND1-214ENST00000489417 C12orf42Q96LP6 360 aa24.01■■□□□ 1.43
SND1-214ENST00000489417 ELP3Q9H9T3 547 aa24.01■■□□□ 1.43
SND1-214ENST00000489417 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.01■■□□□ 1.43
SND1-214ENST00000489417 PPP1R11O60927 126 aaPredicted RBP24.01■■□□□ 1.43
SND1-214ENST00000489417 VCAM1P19320 739 aa24.01■■□□□ 1.43
SND1-214ENST00000489417 PTMSP20962 102 aa24.01■■□□□ 1.43
SND1-214ENST00000489417 NR5A1Q13285 461 aa24.01■■□□□ 1.43
SND1-214ENST00000489417 DGKZQ13574 1117 aa24.01■■□□□ 1.43
SND1-214ENST00000489417 MYSM1Q5VVJ2 828 aa24.01■■□□□ 1.43
SND1-214ENST00000489417 PPP1R18Q6NYC8 613 aa24.01■■□□□ 1.43
SND1-214ENST00000489417 ZNF408Q9H9D4 720 aa24.01■■□□□ 1.43
SND1-214ENST00000489417 FIBPO43427 364 aa24■■□□□ 1.43
SND1-214ENST00000489417 FMR1Q06787 632 aaKnown RBP eCLIP24■■□□□ 1.432e-7■□□□□ 10.4
SND1-214ENST00000489417 BLIDQ8IZY5 108 aa24■■□□□ 1.43
SND1-214ENST00000489417 DAGLBQ8NCG7 672 aa24■■□□□ 1.43
SND1-214ENST00000489417 COA7Q96BR5 231 aa24■■□□□ 1.43
SND1-214ENST00000489417 CLMNQ96JQ2 1002 aa24■■□□□ 1.43
SND1-214ENST00000489417 GDPD2Q9HCC8 539 aa24■■□□□ 1.43
SND1-214ENST00000489417 TFIP11Q9UBB9 837 aaKnown RBP24■■□□□ 1.43
SND1-214ENST00000489417 PCDHA4Q9UN74 947 aa24■■□□□ 1.43
SND1-214ENST00000489417 ESYT2A0FGR8 921 aa23.99■■□□□ 1.43
SND1-214ENST00000489417 HMGCS2P54868 508 aa23.99■■□□□ 1.43
SND1-214ENST00000489417 SNAP25P60880 206 aa23.99■■□□□ 1.43
SND1-214ENST00000489417 NBR1Q14596 966 aa23.99■■□□□ 1.43
SND1-214ENST00000489417 CSPP1Q1MSJ5 1256 aa23.99■■□□□ 1.43
SND1-214ENST00000489417 LDLRAD1Q5T700 205 aa23.99■■□□□ 1.43
SND1-214ENST00000489417 ERO1BQ86YB8 467 aa23.99■■□□□ 1.43
SND1-214ENST00000489417 TMEM87AQ8NBN3 555 aa23.99■■□□□ 1.43
SND1-214ENST00000489417 RBM46Q8TBY0 533 aaKnown RBP23.99■■□□□ 1.43
SND1-214ENST00000489417 KIFC2Q96AC6 838 aa23.99■■□□□ 1.43
SND1-214ENST00000489417 ZMYND12Q9H0C1 365 aa23.99■■□□□ 1.43
SND1-214ENST00000489417 C6orf50Q9HD87 102 aa23.99■■□□□ 1.43
SND1-214ENST00000489417 TMOD4Q9NZQ9 345 aa23.99■■□□□ 1.43
SND1-214ENST00000489417 CFAP45Q9UL16 551 aa23.99■■□□□ 1.43
SND1-214ENST00000489417 SPDYE5A6NIY4 337 aa23.98■■□□□ 1.43
SND1-214ENST00000489417 PPATQ06203 517 aa23.98■■□□□ 1.43
SND1-214ENST00000489417 SH3D19Q5HYK7 790 aa23.98■■□□□ 1.43
SND1-214ENST00000489417 CNKSR2Q8WXI2 1034 aa23.98■■□□□ 1.43
SND1-214ENST00000489417 TNFRSF25Q93038 417 aa23.98■■□□□ 1.43
SND1-214ENST00000489417 TANGO6Q9C0B7 1094 aa23.98■■□□□ 1.43
SND1-214ENST00000489417 SCAND2PQ9GZW5 306 aaPredicted RBP23.98■■□□□ 1.43
SND1-214ENST00000489417 RPAP3Q9H6T3 665 aaPredicted RBP23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms