RNA–Protein interactions for RNA: ENST00000489342.1

RAB4A-204, Transcript of RAB4A, member RAS oncogene family, humanhuman

TSL 5

Gene RAB4A, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4A-204ENST00000489342 SPACA3Q8IXA5 215 aa7.48□□□□□ -1.21
RAB4A-204ENST00000489342 CYB5D2Q8WUJ1 264 aa7.48□□□□□ -1.21
RAB4A-204ENST00000489342 NKD1Q969G9 470 aa7.48□□□□□ -1.21
RAB4A-204ENST00000489342 C8orf37Q96NL8 207 aa7.48□□□□□ -1.21
RAB4A-204ENST00000489342 LRRC3Q9BY71 257 aa7.48□□□□□ -1.21
RAB4A-204ENST00000489342 TNKS2Q9H2K2 1166 aa7.48□□□□□ -1.21
RAB4A-204ENST00000489342 KCNQ5Q9NR82 932 aa7.48□□□□□ -1.21
RAB4A-204ENST00000489342 UBP1Q9NZI7 540 aa7.48□□□□□ -1.21
RAB4A-204ENST00000489342 AFF2P51816 1311 aa7.48□□□□□ -1.21
RAB4A-204ENST00000489342 PRR33A8MZF0 331 aa7.47□□□□□ -1.21
RAB4A-204ENST00000489342 SCAMP3O14828 347 aaKnown RBP7.47□□□□□ -1.21
RAB4A-204ENST00000489342 RECKO95980 971 aa7.47□□□□□ -1.21
RAB4A-204ENST00000489342 VAMP1P23763 118 aa7.47□□□□□ -1.21
RAB4A-204ENST00000489342 CD96P40200 585 aa7.47□□□□□ -1.21
RAB4A-204ENST00000489342 KIR3DL1P43629 444 aa7.47□□□□□ -1.21
RAB4A-204ENST00000489342 IKZF1Q13422 519 aa7.47□□□□□ -1.21
RAB4A-204ENST00000489342 NKPD1Q17RQ9 610 aa7.47□□□□□ -1.21
RAB4A-204ENST00000489342 LDLRAD1Q5T700 205 aa7.47□□□□□ -1.21
RAB4A-204ENST00000489342 GK5Q6ZS86 529 aa7.47□□□□□ -1.21
RAB4A-204ENST00000489342 SPRED2Q7Z698 418 aa7.47□□□□□ -1.21
RAB4A-204ENST00000489342 RGS22Q8NE09 1264 aa7.47□□□□□ -1.21
RAB4A-204ENST00000489342 CEP131Q9UPN4 1083 aa7.47□□□□□ -1.21
RAB4A-204ENST00000489342 PRR36Q9H6K5 1346 aa7.47□□□□□ -1.21
RAB4A-204ENST00000489342 TMEM2Q9UHN6 1383 aa7.46□□□□□ -1.21
RAB4A-204ENST00000489342 CHURC1-FNTBB4DL54 471 aa7.46□□□□□ -1.22
RAB4A-204ENST00000489342 H3BS24 57 aa7.46□□□□□ -1.22
RAB4A-204ENST00000489342 ZNF865P0CJ78 1059 aaPredicted RBP7.46□□□□□ -1.22
RAB4A-204ENST00000489342 ZNF394Q53GI3 561 aa7.46□□□□□ -1.22
RAB4A-204ENST00000489342 NFXL1Q6ZNB6 911 aa7.46□□□□□ -1.22
RAB4A-204ENST00000489342 C22orf34Q6ZV56 151 aa7.46□□□□□ -1.22
RAB4A-204ENST00000489342 SLFN12Q8IYM2 578 aa7.46□□□□□ -1.22
RAB4A-204ENST00000489342 CCDC74BQ96LY2 380 aa7.46□□□□□ -1.22
RAB4A-204ENST00000489342 HSPA12BQ96MM6 686 aa7.46□□□□□ -1.22
RAB4A-204ENST00000489342 PCDHGB7Q9Y5F8 929 aa7.46□□□□□ -1.22
RAB4A-204ENST00000489342 MAP3K1Q13233 1512 aa7.46□□□□□ -1.22
RAB4A-204ENST00000489342 CNTNAP4Q9C0A0 1308 aa7.46□□□□□ -1.22
RAB4A-204ENST00000489342 PIK3C2BO00750 1634 aa7.45□□□□□ -1.22
RAB4A-204ENST00000489342 RAG1P15918 1043 aa7.45□□□□□ -1.22
RAB4A-204ENST00000489342 ATF3P18847 181 aa7.45□□□□□ -1.22
RAB4A-204ENST00000489342 GBP1P32455 592 aa7.45□□□□□ -1.22
RAB4A-204ENST00000489342 CRKP46108 304 aa7.45□□□□□ -1.22
RAB4A-204ENST00000489342 ZNF165P49910 485 aa7.45□□□□□ -1.22
RAB4A-204ENST00000489342 PI4K2BQ8TCG2 481 aa7.45□□□□□ -1.22
RAB4A-204ENST00000489342 NT5C1AQ9BXI3 368 aa7.45□□□□□ -1.22
RAB4A-204ENST00000489342 CAPN6Q9Y6Q1 641 aa7.45□□□□□ -1.22
RAB4A-204ENST00000489342 ARHGAP23Q9P227 1491 aa7.44□□□□□ -1.22
RAB4A-204ENST00000489342 DNAJB8Q8NHS0 232 aa7.44□□□□□ -1.22
RAB4A-204ENST00000489342 BAHD1Q8TBE0 780 aaPredicted RBP7.44□□□□□ -1.22
RAB4A-204ENST00000489342 ADGRE2Q9UHX3 823 aa7.44□□□□□ -1.22
RAB4A-204ENST00000489342 KCNH3Q9ULD8 1083 aa7.44□□□□□ -1.22
RAB4A-204ENST00000489342 SPATA31A6Q5VVP1 1343 aa7.44□□□□□ -1.22
RAB4A-204ENST00000489342 CEP162Q5TB80 1403 aa7.44□□□□□ -1.22
RAB4A-204ENST00000489342 EHBP1L1Q8N3D4 1523 aa7.43□□□□□ -1.22
RAB4A-204ENST00000489342 TAL1P17542 331 aaPredicted RBP7.43□□□□□ -1.22
RAB4A-204ENST00000489342 FUT4P22083 530 aa7.43□□□□□ -1.22
RAB4A-204ENST00000489342 ZP2Q05996 745 aa7.43□□□□□ -1.22
RAB4A-204ENST00000489342 TNK2Q07912 1038 aa7.43□□□□□ -1.22
RAB4A-204ENST00000489342 ARSHQ5FYA8 562 aa7.43□□□□□ -1.22
RAB4A-204ENST00000489342 MCTP1Q6DN14 999 aa7.43□□□□□ -1.22
RAB4A-204ENST00000489342 EAF1Q96JC9 268 aaPredicted RBP7.43□□□□□ -1.22
RAB4A-204ENST00000489342 KIF2CQ99661 725 aa7.43□□□□□ -1.22
RAB4A-204ENST00000489342 ZSWIM5Q9P217 1185 aa7.43□□□□□ -1.22
RAB4A-204ENST00000489342 PITPNM2Q9BZ72 1349 aa7.43□□□□□ -1.22
RAB4A-204ENST00000489342 SLIT1O75093 1534 aa7.42□□□□□ -1.22
RAB4A-204ENST00000489342 PRDM15P57071 1507 aaPredicted RBP7.42□□□□□ -1.22
RAB4A-204ENST00000489342 COL16A1Q07092 1604 aaPredicted RBP7.42□□□□□ -1.22
RAB4A-204ENST00000489342 SLC22A31A6NKX4 558 aa7.42□□□□□ -1.22
RAB4A-204ENST00000489342 CLCQ05315 142 aa7.42□□□□□ -1.22
RAB4A-204ENST00000489342 ZNF792Q3KQV3 632 aa7.42□□□□□ -1.22
RAB4A-204ENST00000489342 BRINP3Q76B58 766 aa7.42□□□□□ -1.22
RAB4A-204ENST00000489342 WFDC3Q8IUB2 231 aa7.42□□□□□ -1.22
RAB4A-204ENST00000489342 ZNF654Q8IZM8 581 aa7.42□□□□□ -1.22
RAB4A-204ENST00000489342 PPP1R13LQ8WUF5 828 aa7.42□□□□□ -1.22
RAB4A-204ENST00000489342 UBE2FQ969M7 185 aa7.42□□□□□ -1.22
RAB4A-204ENST00000489342 RC3H2Q9HBD1 1191 aaKnown RBP7.42□□□□□ -1.22
RAB4A-204ENST00000489342 GMIPQ9P107 970 aa7.42□□□□□ -1.22
RAB4A-204ENST00000489342 RGS12O14924 1447 aa7.42□□□□□ -1.22
RAB4A-204ENST00000489342 MROH1Q8NDA8 1641 aa7.41□□□□□ -1.22
RAB4A-204ENST00000489342 DNAJA2O60884 412 aa7.41□□□□□ -1.22
RAB4A-204ENST00000489342 ATE1O95260 518 aa7.41□□□□□ -1.22
RAB4A-204ENST00000489342 RBM6P78332 1123 aaKnown RBP7.41□□□□□ -1.22
RAB4A-204ENST00000489342 OVOS1Q6IE37 1185 aa7.41□□□□□ -1.22
RAB4A-204ENST00000489342 THAP5Q7Z6K1 395 aa7.41□□□□□ -1.22
RAB4A-204ENST00000489342 SLITRK4Q8IW52 837 aa7.41□□□□□ -1.22
RAB4A-204ENST00000489342 REXO1Q8N1G1 1221 aaKnown RBP7.41□□□□□ -1.22
RAB4A-204ENST00000489342 PIWIL2Q8TC59 973 aaKnown RBP7.41□□□□□ -1.22
RAB4A-204ENST00000489342 RNF141Q8WVD5 230 aa7.41□□□□□ -1.22
RAB4A-204ENST00000489342 TRIT1Q9H3H1 467 aaKnown RBP7.41□□□□□ -1.22
RAB4A-204ENST00000489342 ATP13A1Q9HD20 1204 aa7.41□□□□□ -1.22
RAB4A-204ENST00000489342 SEMA3GQ9NS98 782 aa7.41□□□□□ -1.22
RAB4A-204ENST00000489342 ST14Q9Y5Y6 855 aa7.41□□□□□ -1.22
RAB4A-204ENST00000489342 LRRC9Q6ZRR7 1453 aa7.41□□□□□ -1.22
RAB4A-204ENST00000489342 EFCAB6Q5THR3 1501 aa7.41□□□□□ -1.22
RAB4A-204ENST00000489342 SETBP1Q9Y6X0 1596 aa7.41□□□□□ -1.22
RAB4A-204ENST00000489342 UNCXA6NJT0 531 aa7.4□□□□□ -1.22
RAB4A-204ENST00000489342 LRRFIP1Q32MZ4 808 aaKnown RBP7.4□□□□□ -1.22
RAB4A-204ENST00000489342 FBXW10Q5XX13 1052 aa7.4□□□□□ -1.22
RAB4A-204ENST00000489342 KREMEN1Q96MU8 473 aa7.4□□□□□ -1.22
RAB4A-204ENST00000489342 FERD3LQ96RJ6 166 aa7.4□□□□□ -1.22
RAB4A-204ENST00000489342 EHMT1Q9H9B1 1298 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms