RNA–Protein interactions for RNA: ENST00000489240.1

C9orf16-203, Transcript of chromosome 9 open reading frame 16, humanhuman

TSL 3

Gene C9orf16, Length 573 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-203ENST00000489240 SYDE2Q5VT97 1194 aa21.08■□□□□ 0.97
C9orf16-203ENST00000489240 LARP1BQ659C4 914 aaKnown RBP21.08■□□□□ 0.97
C9orf16-203ENST00000489240 FASTKD5Q7L8L6 764 aaKnown RBP21.08■□□□□ 0.97
C9orf16-203ENST00000489240 SAPCD2Q86UD0 394 aa21.08■□□□□ 0.97
C9orf16-203ENST00000489240 ADGRF4Q8IZF3 695 aa21.08■□□□□ 0.97
C9orf16-203ENST00000489240 TANGO6Q9C0B7 1094 aa21.08■□□□□ 0.97
C9orf16-203ENST00000489240 CPVLQ9H3G5 476 aa21.08■□□□□ 0.97
C9orf16-203ENST00000489240 RPAP3Q9H6T3 665 aaPredicted RBP21.08■□□□□ 0.97
C9orf16-203ENST00000489240 VAT1LQ9HCJ6 419 aa21.08■□□□□ 0.97
C9orf16-203ENST00000489240 SEC63Q9UGP8 760 aaKnown RBP21.08■□□□□ 0.97
C9orf16-203ENST00000489240 TLL2Q9Y6L7 1015 aa21.08■□□□□ 0.97
C9orf16-203ENST00000489240 DGKZQ13574 1117 aa21.07■□□□□ 0.96
C9orf16-203ENST00000489240 SLC35G1Q2M3R5 365 aa21.07■□□□□ 0.96
C9orf16-203ENST00000489240 SPRYD7Q5W111 196 aa21.07■□□□□ 0.96
C9orf16-203ENST00000489240 GADL1Q6ZQY3 521 aa21.07■□□□□ 0.96
C9orf16-203ENST00000489240 ALG1Q9BT22 464 aa21.07■□□□□ 0.96
C9orf16-203ENST00000489240 CIZ1Q9ULV3 898 aaPredicted RBP21.07■□□□□ 0.96
C9orf16-203ENST00000489240 COL11A1P12107 1806 aaPredicted RBP21.06■□□□□ 0.96
C9orf16-203ENST00000489240 SCG2P13521 617 aa21.06■□□□□ 0.96
C9orf16-203ENST00000489240 DDIT3P35638 169 aa21.06■□□□□ 0.96
C9orf16-203ENST00000489240 GJA5P36382 358 aa21.06■□□□□ 0.96
C9orf16-203ENST00000489240 GTF2A2P52657 109 aa21.06■□□□□ 0.96
C9orf16-203ENST00000489240 PFKFB3Q16875 520 aaPredicted RBP21.06■□□□□ 0.96
C9orf16-203ENST00000489240 PRPF38AQ8NAV1 312 aaKnown RBP21.06■□□□□ 0.96
C9orf16-203ENST00000489240 RGS22Q8NE09 1264 aa21.06■□□□□ 0.96
C9orf16-203ENST00000489240 JMJD4Q9H9V9 463 aa21.06■□□□□ 0.96
C9orf16-203ENST00000489240 PRR12Q9ULL5 1215 aa21.06■□□□□ 0.96
C9orf16-203ENST00000489240 USP17L15C9J2P7 530 aa21.05■□□□□ 0.96
C9orf16-203ENST00000489240 USP17L13C9JLJ4 530 aa21.05■□□□□ 0.96
C9orf16-203ENST00000489240 USP17L11C9JVI0 530 aa21.05■□□□□ 0.96
C9orf16-203ENST00000489240 USP17L18D6R9N7 530 aa21.05■□□□□ 0.96
C9orf16-203ENST00000489240 USP17L22D6RA61 530 aa21.05■□□□□ 0.96
C9orf16-203ENST00000489240 USP17L17D6RBQ6 530 aa21.05■□□□□ 0.96
C9orf16-203ENST00000489240 USP17L19D6RCP7 530 aa21.05■□□□□ 0.96
C9orf16-203ENST00000489240 USP17L20D6RJB6 530 aa21.05■□□□□ 0.96
C9orf16-203ENST00000489240 CETPP11597 493 aa21.05■□□□□ 0.96
C9orf16-203ENST00000489240 XBP1P17861 261 aa21.05■□□□□ 0.96
C9orf16-203ENST00000489240 ZNF157P51786 506 aaPredicted RBP21.05■□□□□ 0.96
C9orf16-203ENST00000489240 USP17L24Q0WX57 530 aa21.05■□□□□ 0.96
C9orf16-203ENST00000489240 PKN1Q16512 942 aa21.05■□□□□ 0.96
C9orf16-203ENST00000489240 RGMBQ6NW40 437 aa21.05■□□□□ 0.96
C9orf16-203ENST00000489240 PIBF1Q8WXW3 757 aa21.05■□□□□ 0.96
C9orf16-203ENST00000489240 MTMR8Q96EF0 704 aa21.05■□□□□ 0.96
C9orf16-203ENST00000489240 PIGSQ96S52 555 aa21.05■□□□□ 0.96
C9orf16-203ENST00000489240 SLF1Q9BQI6 1058 aa21.05■□□□□ 0.96
C9orf16-203ENST00000489240 ABT1Q9ULW3 272 aaKnown RBP21.05■□□□□ 0.96
C9orf16-203ENST00000489240 PNMA6FA0A0J9YX94 578 aa21.04■□□□□ 0.96
C9orf16-203ENST00000489240 hCG_1642624A0A1W2PR95 340 aa21.04■□□□□ 0.96
C9orf16-203ENST00000489240 hCG_1984214I3L0E3 225 aa21.04■□□□□ 0.96
C9orf16-203ENST00000489240 ZBTB5O15062 677 aa21.04■□□□□ 0.96
C9orf16-203ENST00000489240 FLOT1O75955 427 aa21.04■□□□□ 0.96
C9orf16-203ENST00000489240 SYT1P21579 422 aa21.04■□□□□ 0.96
C9orf16-203ENST00000489240 PABPC4Q13310 644 aaKnown RBP eCLIP21.04■□□□□ 0.968e-29■■■■■ 37.4
C9orf16-203ENST00000489240 TRIM29Q14134 588 aa21.04■□□□□ 0.96
C9orf16-203ENST00000489240 CATSPERGQ6ZRH7 1159 aa21.04■□□□□ 0.96
C9orf16-203ENST00000489240 HOMER1Q86YM7 354 aa21.04■□□□□ 0.96
C9orf16-203ENST00000489240 ZNF713Q8N859 430 aaPredicted RBP21.04■□□□□ 0.96
C9orf16-203ENST00000489240 KIFC2Q96AC6 838 aa21.04■□□□□ 0.96
C9orf16-203ENST00000489240 HHIPL1Q96JK4 782 aa21.04■□□□□ 0.96
C9orf16-203ENST00000489240 C8orf76Q96K31 380 aa21.04■□□□□ 0.96
C9orf16-203ENST00000489240 CHMP5Q9NZZ3 219 aa21.04■□□□□ 0.96
C9orf16-203ENST00000489240 H3BQV1 296 aa21.03■□□□□ 0.96
C9orf16-203ENST00000489240 FDX1P10109 184 aa21.03■□□□□ 0.96
C9orf16-203ENST00000489240 NUCB2P80303 420 aa21.03■□□□□ 0.96
C9orf16-203ENST00000489240 TRAF1Q13077 416 aa21.03■□□□□ 0.96
C9orf16-203ENST00000489240 COG2Q14746 738 aa21.03■□□□□ 0.96
C9orf16-203ENST00000489240 IFFO2Q5TF58 517 aa21.03■□□□□ 0.96
C9orf16-203ENST00000489240 RASAL3Q86YV0 1011 aa21.03■□□□□ 0.96
C9orf16-203ENST00000489240 SH3GLB2Q9NR46 395 aa21.03■□□□□ 0.96
C9orf16-203ENST00000489240 FBXO28Q9NVF7 368 aa21.03■□□□□ 0.96
C9orf16-203ENST00000489240 AGTPBP1Q9UPW5 1226 aa21.03■□□□□ 0.96
C9orf16-203ENST00000489240 MYPNQ86TC9 1320 aa21.03■□□□□ 0.96
C9orf16-203ENST00000489240 STX6O43752 255 aa21.02■□□□□ 0.96
C9orf16-203ENST00000489240 HOXA7P31268 230 aaPredicted RBP21.02■□□□□ 0.96
C9orf16-203ENST00000489240 CDC37Q16543 378 aaPredicted RBP21.02■□□□□ 0.96
C9orf16-203ENST00000489240 FAM177A1Q8N128 213 aaPredicted RBP21.02■□□□□ 0.96
C9orf16-203ENST00000489240 CCDC102AQ96A19 550 aa21.02■□□□□ 0.96
C9orf16-203ENST00000489240 AIFM3Q96NN9 605 aa21.02■□□□□ 0.96
C9orf16-203ENST00000489240 PPP1R9AQ9ULJ8 1098 aa21.02■□□□□ 0.96
C9orf16-203ENST00000489240 QRICH1Q2TAL8 776 aa21.01■□□□□ 0.95
C9orf16-203ENST00000489240 TREML2Q5T2D2 321 aa21.01■□□□□ 0.95
C9orf16-203ENST00000489240 SAMD1Q6SPF0 538 aaPredicted RBP21.01■□□□□ 0.95
C9orf16-203ENST00000489240 CCDC12Q8WUD4 166 aaPredicted RBP21.01■□□□□ 0.95
C9orf16-203ENST00000489240 RANBP17Q9H2T7 1088 aaKnown RBP21.01■□□□□ 0.95
C9orf16-203ENST00000489240 HOXC10Q9NYD6 342 aa21.01■□□□□ 0.95
C9orf16-203ENST00000489240 CTDP1Q9Y5B0 961 aaPredicted RBP21.01■□□□□ 0.95
C9orf16-203ENST00000489240 WDR33Q9C0J8 1336 aaKnown RBP21.01■□□□□ 0.95
C9orf16-203ENST00000489240 A0A0G2JMZ2 1700 aa21.01■□□□□ 0.95
C9orf16-203ENST00000489240 MYH15Q9Y2K3 1946 aa21■□□□□ 0.95
C9orf16-203ENST00000489240 CCL15-CCL14A0A0B4J2E2 113 aa21■□□□□ 0.95
C9orf16-203ENST00000489240 VPS37CA5D8V6 355 aaPredicted RBP21■□□□□ 0.95
C9orf16-203ENST00000489240 ZBED4O75132 1171 aa21■□□□□ 0.95
C9orf16-203ENST00000489240 SLC10A3P09131 477 aa21■□□□□ 0.95
C9orf16-203ENST00000489240 DSG3P32926 999 aa21■□□□□ 0.95
C9orf16-203ENST00000489240 FOSBP53539 338 aa21■□□□□ 0.95
C9orf16-203ENST00000489240 MKRN3Q13064 507 aaKnown RBP21■□□□□ 0.95
C9orf16-203ENST00000489240 MOGSQ13724 837 aa21■□□□□ 0.95
C9orf16-203ENST00000489240 CCL15Q16663 113 aa21■□□□□ 0.95
C9orf16-203ENST00000489240 HEATR3Q7Z4Q2 680 aa21■□□□□ 0.95
C9orf16-203ENST00000489240 CCDC148Q8NFR7 591 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms