RNA–Protein interactions for RNA: ENST00000489180.6

NPHP4-209, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 5,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-209ENST00000489180 RBM6P78332 1123 aaKnown RBP19.4■□□□□ 0.7
NPHP4-209ENST00000489180 ANKRD20A3Q5VUR7 823 aa19.4■□□□□ 0.7
NPHP4-209ENST00000489180 SPATA1Q5VX52 437 aa19.4■□□□□ 0.7
NPHP4-209ENST00000489180 CTAGE3PQ8IX95 158 aa19.4■□□□□ 0.7
NPHP4-209ENST00000489180 FAM114A2Q9NRY5 505 aa19.4■□□□□ 0.7
NPHP4-209ENST00000489180 TOM1O60784 492 aa19.39■□□□□ 0.7
NPHP4-209ENST00000489180 RNF10Q8N5U6 811 aaKnown RBP19.39■□□□□ 0.7
NPHP4-209ENST00000489180 BCAS4Q8TDM0 211 aa19.39■□□□□ 0.7
NPHP4-209ENST00000489180 MAST3O60307 1309 aa19.39■□□□□ 0.69
NPHP4-209ENST00000489180 GAS7O60861 476 aa19.39■□□□□ 0.69
NPHP4-209ENST00000489180 FAM102BQ5T8I3 360 aa19.39■□□□□ 0.69
NPHP4-209ENST00000489180 CCDC13Q8IYE1 715 aa19.39■□□□□ 0.69
NPHP4-209ENST00000489180 TAB3Q8N5C8 712 aaPredicted RBP19.39■□□□□ 0.69
NPHP4-209ENST00000489180 PARP2Q9UGN5 583 aa19.39■□□□□ 0.69
NPHP4-209ENST00000489180 RNF40O75150 1001 aa19.39■□□□□ 0.69
NPHP4-209ENST00000489180 ADCY8P40145 1251 aa19.39■□□□□ 0.69
NPHP4-209ENST00000489180 FTOQ9C0B1 505 aaKnown RBP eCLIP19.39■□□□□ 0.69
NPHP4-209ENST00000489180 GTPBP6O43824 516 aaPredicted RBP19.39■□□□□ 0.69
NPHP4-209ENST00000489180 PTGDRQ13258 359 aa19.39■□□□□ 0.69
NPHP4-209ENST00000489180 NAA35Q5VZE5 725 aa19.39■□□□□ 0.69
NPHP4-209ENST00000489180 KCTD16Q68DU8 428 aa19.39■□□□□ 0.69
NPHP4-209ENST00000489180 LRRC47Q8N1G4 583 aaKnown RBP19.39■□□□□ 0.69
NPHP4-209ENST00000489180 TBC1D31Q96DN5 1066 aa19.39■□□□□ 0.69
NPHP4-209ENST00000489180 TRIM6Q9C030 488 aaPredicted RBP19.38■□□□□ 0.69
NPHP4-209ENST00000489180 TBX22Q9Y458 520 aa19.38■□□□□ 0.69
NPHP4-209ENST00000489180 PEG3Q9GZU2 1588 aa19.38■□□□□ 0.69
NPHP4-209ENST00000489180 KDM3AQ9Y4C1 1321 aa19.38■□□□□ 0.69
NPHP4-209ENST00000489180 ARHGAP24Q8N264 748 aa19.38■□□□□ 0.69
NPHP4-209ENST00000489180 IQCDQ96DY2 449 aa19.38■□□□□ 0.69
NPHP4-209ENST00000489180 H7C1D1 291 aa19.38■□□□□ 0.69
NPHP4-209ENST00000489180 OR52Z1P0C646 297 aa19.38■□□□□ 0.69
NPHP4-209ENST00000489180 SCG2P13521 617 aa19.38■□□□□ 0.69
NPHP4-209ENST00000489180 LGSNQ5TDP6 509 aa19.38■□□□□ 0.69
NPHP4-209ENST00000489180 CCDC38Q502W7 563 aa19.38■□□□□ 0.69
NPHP4-209ENST00000489180 SMYD4Q8IYR2 804 aaPredicted RBP19.38■□□□□ 0.69
NPHP4-209ENST00000489180 CCDC170Q8IYT3 715 aa19.38■□□□□ 0.69
NPHP4-209ENST00000489180 EPN1Q9Y6I3 576 aaPredicted RBP19.38■□□□□ 0.69
NPHP4-209ENST00000489180 DKC1O60832 514 aaKnown RBP eCLIP19.38■□□□□ 0.691e-6■■■■■ 42.6
NPHP4-209ENST00000489180 DPCR1Q3MIW9 517 aa19.38■□□□□ 0.69
NPHP4-209ENST00000489180 TRIM68Q6AZZ1 485 aa19.38■□□□□ 0.69
NPHP4-209ENST00000489180 PALM2Q8IXS6 379 aa19.38■□□□□ 0.69
NPHP4-209ENST00000489180 SLC35F6Q8N357 371 aa19.38■□□□□ 0.69
NPHP4-209ENST00000489180 USP40Q9NVE5 1235 aa19.38■□□□□ 0.69
NPHP4-209ENST00000489180 INSRP06213 1382 aa19.37■□□□□ 0.69
NPHP4-209ENST00000489180 ZMYND10O75800 440 aa19.37■□□□□ 0.69
NPHP4-209ENST00000489180 COPB1P53618 953 aaKnown RBP19.37■□□□□ 0.69
NPHP4-209ENST00000489180 PNMA1Q8ND90 353 aa19.37■□□□□ 0.69
NPHP4-209ENST00000489180 HAUS4Q9H6D7 363 aa19.37■□□□□ 0.69
NPHP4-209ENST00000489180 CASQ2O14958 399 aaPredicted RBP19.37■□□□□ 0.69
NPHP4-209ENST00000489180 RASSF7Q02833 373 aa19.37■□□□□ 0.69
NPHP4-209ENST00000489180 TMCO4Q5TGY1 634 aa19.37■□□□□ 0.69
NPHP4-209ENST00000489180 MIER3Q7Z3K6 550 aa19.37■□□□□ 0.69
NPHP4-209ENST00000489180 TRIML1Q8N9V2 468 aa19.37■□□□□ 0.69
NPHP4-209ENST00000489180 RSAD2Q8WXG1 361 aa19.37■□□□□ 0.69
NPHP4-209ENST00000489180 KRT12Q99456 494 aa19.37■□□□□ 0.69
NPHP4-209ENST00000489180 PSTPIP2Q9H939 334 aa19.37■□□□□ 0.69
NPHP4-209ENST00000489180 ZBED4O75132 1171 aa19.37■□□□□ 0.69
NPHP4-209ENST00000489180 PRPF6O94906 941 aaKnown RBP19.37■□□□□ 0.69
NPHP4-209ENST00000489180 ST7Q9NRC1 585 aa19.37■□□□□ 0.69
NPHP4-209ENST00000489180 PCDHA5Q9Y5H7 936 aa19.37■□□□□ 0.69
NPHP4-209ENST00000489180 FAM135BQ49AJ0 1406 aa19.37■□□□□ 0.69
NPHP4-209ENST00000489180 GUCY2DQ02846 1103 aa19.37■□□□□ 0.69
NPHP4-209ENST00000489180 AZI2Q9H6S1 392 aa19.37■□□□□ 0.69
NPHP4-209ENST00000489180 ARMCX3Q9UH62 379 aaPredicted RBP19.37■□□□□ 0.69
NPHP4-209ENST00000489180 PCDHA12Q9UN75 941 aa19.37■□□□□ 0.69
NPHP4-209ENST00000489180 RIPOR2Q9Y4F9 1068 aa19.37■□□□□ 0.69
NPHP4-209ENST00000489180 EIF4G3O43432 1585 aaKnown RBP19.37■□□□□ 0.69
NPHP4-209ENST00000489180 ADORA1P30542 326 aa19.36■□□□□ 0.69
NPHP4-209ENST00000489180 ZNF589Q86UQ0 364 aaPredicted RBP19.36■□□□□ 0.69
NPHP4-209ENST00000489180 CDAN1Q8IWY9 1227 aa19.36■□□□□ 0.69
NPHP4-209ENST00000489180 MAIP1Q8WWC4 291 aa19.36■□□□□ 0.69
NPHP4-209ENST00000489180 ATP8A2Q9NTI2 1148 aa19.36■□□□□ 0.69
NPHP4-209ENST00000489180 TACC3Q9Y6A5 838 aa19.36■□□□□ 0.69
NPHP4-209ENST00000489180 MED23Q9ULK4 1368 aa19.36■□□□□ 0.69
NPHP4-209ENST00000489180 RBL2Q08999 1139 aa19.36■□□□□ 0.69
NPHP4-209ENST00000489180 TDRD7Q8NHU6 1098 aaKnown RBP19.36■□□□□ 0.69
NPHP4-209ENST00000489180 MAP4K1Q92918 833 aa19.36■□□□□ 0.69
NPHP4-209ENST00000489180 GTF2IP78347 998 aa19.36■□□□□ 0.69
NPHP4-209ENST00000489180 NEK8Q86SG6 692 aa19.36■□□□□ 0.69
NPHP4-209ENST00000489180 GRAMD1CQ8IYS0 662 aa19.36■□□□□ 0.69
NPHP4-209ENST00000489180 CEP120Q8N960 986 aa19.36■□□□□ 0.69
NPHP4-209ENST00000489180 NUF2Q9BZD4 464 aa19.36■□□□□ 0.69
NPHP4-209ENST00000489180 CLGNO14967 610 aa19.36■□□□□ 0.69
NPHP4-209ENST00000489180 EHHADHQ08426 723 aa19.36■□□□□ 0.69
NPHP4-209ENST00000489180 CERS3Q8IU89 383 aa19.36■□□□□ 0.69
NPHP4-209ENST00000489180 PUS3Q9BZE2 481 aaKnown RBP19.35■□□□□ 0.69
NPHP4-209ENST00000489180 RTEL1Q9NZ71 1219 aa19.35■□□□□ 0.69
NPHP4-209ENST00000489180 KDM5AP29375 1690 aaKnown RBP19.35■□□□□ 0.69
NPHP4-209ENST00000489180 KLRF2D3W0D1 207 aa19.35■□□□□ 0.69
NPHP4-209ENST00000489180 GABPAQ06546 454 aa19.35■□□□□ 0.69
NPHP4-209ENST00000489180 ADAM9Q13443 819 aa19.35■□□□□ 0.69
NPHP4-209ENST00000489180 KLHL14Q9P2G3 628 aa19.35■□□□□ 0.69
NPHP4-209ENST00000489180 DDX25Q9UHL0 483 aaKnown RBP19.35■□□□□ 0.69
NPHP4-209ENST00000489180 PSDA5PKW4 1024 aaPredicted RBP19.35■□□□□ 0.69
NPHP4-209ENST00000489180 M0R2C6 588 aa19.35■□□□□ 0.69
NPHP4-209ENST00000489180 MAP2K2P36507 400 aa19.35■□□□□ 0.69
NPHP4-209ENST00000489180 FAM71BQ8TC56 605 aa19.35■□□□□ 0.69
NPHP4-209ENST00000489180 PLEKHF1Q96S99 279 aa19.35■□□□□ 0.69
NPHP4-209ENST00000489180 RAB20Q9NX57 234 aa19.35■□□□□ 0.69
NPHP4-209ENST00000489180 K7ENM7 598 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms