RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 PLXNA1Q9UIW2 1896 aa29.57■■■□□ 2.32
HMGN1-217ENST00000489072 MNX1P50219 401 aaPredicted RBP29.56■■■□□ 2.32
HMGN1-217ENST00000489072 OLFML2BQ68BL8 750 aa29.56■■■□□ 2.32
HMGN1-217ENST00000489072 PAWRQ96IZ0 340 aaKnown RBP29.56■■■□□ 2.32
HMGN1-217ENST00000489072 ALPK3Q96L96 1907 aa29.55■■■□□ 2.32
HMGN1-217ENST00000489072 MCCP23508 829 aa29.55■■■□□ 2.32
HMGN1-217ENST00000489072 AKNAD1Q5T1N1 836 aa29.55■■■□□ 2.32
HMGN1-217ENST00000489072 LHX8Q68G74 356 aa29.55■■■□□ 2.32
HMGN1-217ENST00000489072 SNRNP48Q6IEG0 339 aaKnown RBP29.55■■■□□ 2.32
HMGN1-217ENST00000489072 RASGRP2Q7LDG7 609 aa29.55■■■□□ 2.32
HMGN1-217ENST00000489072 ANKLE1Q8NAG6 615 aa29.55■■■□□ 2.32
HMGN1-217ENST00000489072 TRPV1Q8NER1 839 aa29.55■■■□□ 2.32
HMGN1-217ENST00000489072 STAG1Q8WVM7 1258 aa29.55■■■□□ 2.32
HMGN1-217ENST00000489072 MMP19Q99542 508 aa29.55■■■□□ 2.32
HMGN1-217ENST00000489072 TEX13BQ9BXU2 312 aa29.55■■■□□ 2.32
HMGN1-217ENST00000489072 SLC38A10Q9HBR0 1119 aa29.55■■■□□ 2.32
HMGN1-217ENST00000489072 RIPK3Q9Y572 518 aa29.55■■■□□ 2.32
HMGN1-217ENST00000489072 TMEM232C9JQI7 657 aa29.54■■■□□ 2.32
HMGN1-217ENST00000489072 HTATIP2Q9BUP3 242 aa29.54■■■□□ 2.32
HMGN1-217ENST00000489072 ATP2A1O14983 1001 aa29.53■■■□□ 2.32
HMGN1-217ENST00000489072 ZBED4O75132 1171 aa29.53■■■□□ 2.32
HMGN1-217ENST00000489072 COPB2P35606 906 aa29.53■■■□□ 2.32
HMGN1-217ENST00000489072 SLC1A4P43007 532 aa29.53■■■□□ 2.32
HMGN1-217ENST00000489072 MFSD6Q6ZSS7 791 aa29.53■■■□□ 2.32
HMGN1-217ENST00000489072 CPXCR1Q8N123 301 aa29.53■■■□□ 2.32
HMGN1-217ENST00000489072 DPF3Q92784 378 aa29.53■■■□□ 2.32
HMGN1-217ENST00000489072 TCP11L1Q9NUJ3 509 aa29.53■■■□□ 2.32
HMGN1-217ENST00000489072 ISY1Q9ULR0 285 aaKnown RBP29.53■■■□□ 2.32
HMGN1-217ENST00000489072 NEDD4P46934 1319 aa29.52■■■□□ 2.32
HMGN1-217ENST00000489072 PGK2P07205 417 aa29.52■■■□□ 2.32
HMGN1-217ENST00000489072 CYBAP13498 195 aa29.52■■■□□ 2.32
HMGN1-217ENST00000489072 MAML3Q96JK9 1138 aa29.52■■■□□ 2.32
HMGN1-217ENST00000489072 DSCC1Q9BVC3 393 aa29.52■■■□□ 2.32
HMGN1-217ENST00000489072 RAVER2Q9HCJ3 691 aaKnown RBP29.52■■■□□ 2.32
HMGN1-217ENST00000489072 SLC5A4Q9NY91 659 aa29.52■■■□□ 2.32
HMGN1-217ENST00000489072 PCP11498 1178 aaKnown RBP29.51■■■□□ 2.31
HMGN1-217ENST00000489072 STAT2P52630 851 aa29.51■■■□□ 2.31
HMGN1-217ENST00000489072 KCTD2Q14681 263 aa29.51■■■□□ 2.31
HMGN1-217ENST00000489072 KCTD1Q719H9 257 aa29.51■■■□□ 2.31
HMGN1-217ENST00000489072 NECAB2Q7Z6G3 386 aa29.51■■■□□ 2.31
HMGN1-217ENST00000489072 H0YGN5 161 aa29.5■■■□□ 2.31
HMGN1-217ENST00000489072 ZNF213O14771 459 aa29.5■■■□□ 2.31
HMGN1-217ENST00000489072 SLC4A3P48751 1232 aa29.5■■■□□ 2.31
HMGN1-217ENST00000489072 RCSD1Q6JBY9 416 aa29.5■■■□□ 2.31
HMGN1-217ENST00000489072 TMEM47Q9BQJ4 181 aa29.5■■■□□ 2.31
HMGN1-217ENST00000489072 RNF41Q9H4P4 317 aaPredicted RBP29.5■■■□□ 2.31
HMGN1-217ENST00000489072 MTMR7Q9Y216 660 aa29.5■■■□□ 2.31
HMGN1-217ENST00000489072 CTDP1Q9Y5B0 961 aaPredicted RBP29.5■■■□□ 2.31
HMGN1-217ENST00000489072 CNGA1P29973 690 aa29.49■■■□□ 2.31
HMGN1-217ENST00000489072 ZNF792Q3KQV3 632 aa29.49■■■□□ 2.31
HMGN1-217ENST00000489072 FAM160B2Q86V87 743 aa29.49■■■□□ 2.31
HMGN1-217ENST00000489072 CHURC1Q8WUH1 139 aa29.49■■■□□ 2.31
HMGN1-217ENST00000489072 PLA2G6O60733 806 aa29.48■■■□□ 2.31
HMGN1-217ENST00000489072 TOP1P11387 765 aaKnown RBP29.48■■■□□ 2.31
HMGN1-217ENST00000489072 IKQ13123 557 aaPredicted RBP29.48■■■□□ 2.31
HMGN1-217ENST00000489072 DDX20Q9UHI6 824 aaKnown RBP29.48■■■□□ 2.31
HMGN1-217ENST00000489072 OAZ1P54368 228 aa29.47■■■□□ 2.31
HMGN1-217ENST00000489072 PRAMEF19Q5SWL8 479 aa29.47■■■□□ 2.31
HMGN1-217ENST00000489072 SMCHD1A6NHR9 2005 aa29.47■■■□□ 2.31
HMGN1-217ENST00000489072 FDX1P10109 184 aa29.46■■■□□ 2.31
HMGN1-217ENST00000489072 CHMLP26374 656 aa29.46■■■□□ 2.31
HMGN1-217ENST00000489072 DCAF4Q8WV16 495 aa29.46■■■□□ 2.31
HMGN1-217ENST00000489072 ESR2Q92731 530 aa29.46■■■□□ 2.31
HMGN1-217ENST00000489072 C11orf49Q9H6J7 331 aa29.46■■■□□ 2.31
HMGN1-217ENST00000489072 DIS3Q9Y2L1 958 aaKnown RBP29.46■■■□□ 2.31
HMGN1-217ENST00000489072 ZNF536O15090 1300 aa29.45■■■□□ 2.31
HMGN1-217ENST00000489072 SNAP25P60880 206 aa29.45■■■□□ 2.31
HMGN1-217ENST00000489072 CCDC96Q2M329 555 aa29.45■■■□□ 2.31
HMGN1-217ENST00000489072 DHX30Q7L2E3 1194 aaKnown RBP eCLIP29.45■■■□□ 2.31
HMGN1-217ENST00000489072 PRR12Q9ULL5 1215 aa29.45■■■□□ 2.31
HMGN1-217ENST00000489072 PFASO15067 1338 aa29.45■■■□□ 2.3
HMGN1-217ENST00000489072 RAD50Q92878 1312 aa29.45■■■□□ 2.3
HMGN1-217ENST00000489072 DNAJC25-GNG10A0A024R161 153 aa29.44■■■□□ 2.3
HMGN1-217ENST00000489072 MSCO60682 206 aa29.44■■■□□ 2.3
HMGN1-217ENST00000489072 TTBK2Q6IQ55 1244 aa29.44■■■□□ 2.3
HMGN1-217ENST00000489072 AGBL1Q96MI9 1066 aa29.44■■■□□ 2.3
HMGN1-217ENST00000489072 TTC14Q96N46 770 aa29.44■■■□□ 2.3
HMGN1-217ENST00000489072 ZKSCAN3Q9BRR0 538 aa29.44■■■□□ 2.3
HMGN1-217ENST00000489072 CTNNA3Q9UI47 895 aa29.44■■■□□ 2.3
HMGN1-217ENST00000489072 DNAH12Q6ZR08 3092 aa29.43■■■□□ 2.3
HMGN1-217ENST00000489072 KDM4AO75164 1064 aa29.43■■■□□ 2.3
HMGN1-217ENST00000489072 COL6A1P12109 1028 aa29.43■■■□□ 2.3
HMGN1-217ENST00000489072 IMMTQ16891 758 aaKnown RBP29.43■■■□□ 2.3
HMGN1-217ENST00000489072 CHST13Q8NET6 341 aa29.43■■■□□ 2.3
HMGN1-217ENST00000489072 TINF2Q9BSI4 451 aa29.43■■■□□ 2.3
HMGN1-217ENST00000489072 HOMER2Q9NSB8 354 aa29.43■■■□□ 2.3
HMGN1-217ENST00000489072 SEPT4O43236 478 aa29.42■■■□□ 2.3
HMGN1-217ENST00000489072 EVI5O60447 810 aa29.42■■■□□ 2.3
HMGN1-217ENST00000489072 DDX11Q96FC9 970 aa29.42■■■□□ 2.3
HMGN1-217ENST00000489072 FBXO40Q9UH90 709 aa29.42■■■□□ 2.3
HMGN1-217ENST00000489072 MCM3APO60318 1980 aa29.42■■■□□ 2.3
HMGN1-217ENST00000489072 FRMPD2Q68DX3 1309 aaPredicted RBP29.42■■■□□ 2.3
HMGN1-217ENST00000489072 B4E1Z4 1266 aa29.41■■■□□ 2.3
HMGN1-217ENST00000489072 PDHBP11177 359 aa29.41■■■□□ 2.3
HMGN1-217ENST00000489072 SLC16A2P36021 539 aa29.41■■■□□ 2.3
HMGN1-217ENST00000489072 ANO1Q5XXA6 986 aa29.41■■■□□ 2.3
HMGN1-217ENST00000489072 CCDC174Q6PII3 467 aa29.41■■■□□ 2.3
HMGN1-217ENST00000489072 BTNL9Q6UXG8 535 aa29.41■■■□□ 2.3
HMGN1-217ENST00000489072 NR2E3Q9Y5X4 410 aa29.41■■■□□ 2.3
HMGN1-217ENST00000489072 TRIOBPQ9H2D6 2365 aa29.41■■■□□ 2.3
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms