RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 TMC4Q7Z404 712 aa6.49□□□□□ -1.37
SF3A3-207ENST00000488934 GJD3Q8N144 294 aa6.49□□□□□ -1.37
SF3A3-207ENST00000488934 TSPYL6Q8N831 410 aa6.49□□□□□ -1.37
SF3A3-207ENST00000488934 C1orf127Q8N9H9 656 aa6.49□□□□□ -1.37
SF3A3-207ENST00000488934 CRAMP1Q96RY5 1269 aa6.49□□□□□ -1.37
SF3A3-207ENST00000488934 RNF181Q9P0P0 153 aa6.49□□□□□ -1.37
SF3A3-207ENST00000488934 CNTN3Q9P232 1028 aa6.49□□□□□ -1.37
SF3A3-207ENST00000488934 SALL4Q9UJQ4 1053 aa6.49□□□□□ -1.37
SF3A3-207ENST00000488934 DLL1O00548 723 aa6.48□□□□□ -1.37
SF3A3-207ENST00000488934 VAMP4O75379 141 aa6.48□□□□□ -1.37
SF3A3-207ENST00000488934 DEAF1O75398 565 aaPredicted RBP6.48□□□□□ -1.37
SF3A3-207ENST00000488934 TNFRSF21O75509 655 aa6.48□□□□□ -1.37
SF3A3-207ENST00000488934 CT47B1P0C2W7 299 aaPredicted RBP6.48□□□□□ -1.37
SF3A3-207ENST00000488934 SERPINB4P48594 390 aa6.48□□□□□ -1.37
SF3A3-207ENST00000488934 EXOSC9Q06265 439 aaKnown RBP6.48□□□□□ -1.37
SF3A3-207ENST00000488934 C9orf131Q5VYM1 1079 aa6.48□□□□□ -1.37
SF3A3-207ENST00000488934 DDX46Q7L014 1031 aaKnown RBP6.48□□□□□ -1.37
SF3A3-207ENST00000488934 ZBTB38Q8NAP3 1195 aaPredicted RBP6.48□□□□□ -1.37
SF3A3-207ENST00000488934 KLHL23Q8NBE8 558 aa6.48□□□□□ -1.37
SF3A3-207ENST00000488934 CITED4Q96RK1 184 aa6.48□□□□□ -1.37
SF3A3-207ENST00000488934 ISCA1Q9BUE6 129 aa6.48□□□□□ -1.37
SF3A3-207ENST00000488934 METTL22Q9BUU2 404 aaPredicted RBP6.48□□□□□ -1.37
SF3A3-207ENST00000488934 PHAXQ9H814 394 aaKnown RBP6.48□□□□□ -1.37
SF3A3-207ENST00000488934 TPSG1Q9NRR2 321 aa6.48□□□□□ -1.37
SF3A3-207ENST00000488934 CWC25Q9NXE8 425 aaPredicted RBP6.48□□□□□ -1.37
SF3A3-207ENST00000488934 MAP3K2Q9Y2U5 619 aa6.48□□□□□ -1.37
SF3A3-207ENST00000488934 LRRC37AA6NMS7 1700 aa6.47□□□□□ -1.37
SF3A3-207ENST00000488934 PI4KAP2A4QPH2 592 aa6.47□□□□□ -1.37
SF3A3-207ENST00000488934 A6NHS1 94 aa6.47□□□□□ -1.37
SF3A3-207ENST00000488934 LINC01387J3KSC0 135 aa6.47□□□□□ -1.37
SF3A3-207ENST00000488934 PDE2AO00408 941 aaPredicted RBP6.47□□□□□ -1.37
SF3A3-207ENST00000488934 EIF4EBP3O60516 100 aaPredicted RBP6.47□□□□□ -1.37
SF3A3-207ENST00000488934 BBOX1O75936 387 aa6.47□□□□□ -1.37
SF3A3-207ENST00000488934 ARL4DP49703 201 aa6.47□□□□□ -1.37
SF3A3-207ENST00000488934 SETDB1Q15047 1291 aa6.47□□□□□ -1.37
SF3A3-207ENST00000488934 PI4KAP1Q8N8J0 262 aa6.47□□□□□ -1.37
SF3A3-207ENST00000488934 SUPT20HQ8NEM7 779 aa6.47□□□□□ -1.37
SF3A3-207ENST00000488934 WFDC12Q8WWY7 111 aa6.47□□□□□ -1.37
SF3A3-207ENST00000488934 WNT8BQ93098 351 aa6.47□□□□□ -1.37
SF3A3-207ENST00000488934 PSMD1Q99460 953 aa6.47□□□□□ -1.37
SF3A3-207ENST00000488934 MYD88Q99836 296 aa6.47□□□□□ -1.37
SF3A3-207ENST00000488934 VPS33BQ9H267 617 aa6.47□□□□□ -1.37
SF3A3-207ENST00000488934 CDHR2Q9BYE9 1310 aa6.47□□□□□ -1.37
SF3A3-207ENST00000488934 H3BRJ5 948 aa6.46□□□□□ -1.38
SF3A3-207ENST00000488934 NFKBIEO00221 500 aa6.46□□□□□ -1.38
SF3A3-207ENST00000488934 IRS4O14654 1257 aaPredicted RBP6.46□□□□□ -1.38
SF3A3-207ENST00000488934 PDE8AO60658 829 aa6.46□□□□□ -1.38
SF3A3-207ENST00000488934 PCCAP05165 728 aaPredicted RBP6.46□□□□□ -1.38
SF3A3-207ENST00000488934 H2AFB1P0C5Y9 115 aa6.46□□□□□ -1.38
SF3A3-207ENST00000488934 H2AFB2P0C5Z0 115 aa6.46□□□□□ -1.38
SF3A3-207ENST00000488934 IREB2P48200 963 aaKnown RBP6.46□□□□□ -1.38
SF3A3-207ENST00000488934 GRAPQ13588 217 aa6.46□□□□□ -1.38
SF3A3-207ENST00000488934 SF3B3Q15393 1217 aaKnown RBP6.46□□□□□ -1.38
SF3A3-207ENST00000488934 CCDC152Q4G0S7 254 aa6.46□□□□□ -1.38
SF3A3-207ENST00000488934 C16orf71Q8IYS4 520 aaPredicted RBP6.46□□□□□ -1.38
SF3A3-207ENST00000488934 TMEM130Q8N3G9 435 aa6.46□□□□□ -1.38
SF3A3-207ENST00000488934 LINS1Q8NG48 757 aa6.46□□□□□ -1.38
SF3A3-207ENST00000488934 GRAPLQ8TC17 118 aaPredicted RBP6.46□□□□□ -1.38
SF3A3-207ENST00000488934 DNAAF4Q8WXU2 420 aa6.46□□□□□ -1.38
SF3A3-207ENST00000488934 TP53INP1Q96A56 240 aa6.46□□□□□ -1.38
SF3A3-207ENST00000488934 FAM89AQ96GI7 184 aa6.46□□□□□ -1.38
SF3A3-207ENST00000488934 ADAM19Q9H013 955 aa6.46□□□□□ -1.38
SF3A3-207ENST00000488934 SEMA6BQ9H3T3 888 aa6.46□□□□□ -1.38
SF3A3-207ENST00000488934 AKTIPQ9H8T0 292 aa6.46□□□□□ -1.38
SF3A3-207ENST00000488934 DZANK1Q9NVP4 752 aa6.46□□□□□ -1.38
SF3A3-207ENST00000488934 ABCC4O15439 1325 aa6.46□□□□□ -1.38
SF3A3-207ENST00000488934 PTPRCP08575 1304 aa6.46□□□□□ -1.38
SF3A3-207ENST00000488934 SCN4AP35499 1836 aa6.46□□□□□ -1.38
SF3A3-207ENST00000488934 WDR90Q96KV7 1748 aa6.45□□□□□ -1.38
SF3A3-207ENST00000488934 GLTPD2A6NH11 291 aa6.45□□□□□ -1.38
SF3A3-207ENST00000488934 FSCN2O14926 492 aa6.45□□□□□ -1.38
SF3A3-207ENST00000488934 EREGO14944 169 aa6.45□□□□□ -1.38
SF3A3-207ENST00000488934 BRD1O95696 1058 aa6.45□□□□□ -1.38
SF3A3-207ENST00000488934 HCLS1P14317 486 aaPredicted RBP6.45□□□□□ -1.38
SF3A3-207ENST00000488934 CD68P34810 354 aaPredicted RBP6.45□□□□□ -1.38
SF3A3-207ENST00000488934 IARSP41252 1262 aaKnown RBP6.45□□□□□ -1.38
SF3A3-207ENST00000488934 SLFN5Q08AF3 891 aa6.45□□□□□ -1.38
SF3A3-207ENST00000488934 RSPO4Q2I0M5 234 aaPredicted RBP6.45□□□□□ -1.38
SF3A3-207ENST00000488934 ALDH1L2Q3SY69 923 aa6.45□□□□□ -1.38
SF3A3-207ENST00000488934 SP8Q8IXZ3 490 aa6.45□□□□□ -1.38
SF3A3-207ENST00000488934 TMEM102Q8N9M5 508 aaPredicted RBP6.45□□□□□ -1.38
SF3A3-207ENST00000488934 ZNF526Q8TF50 670 aaPredicted RBP6.45□□□□□ -1.38
SF3A3-207ENST00000488934 JDP2Q8WYK2 163 aa6.45□□□□□ -1.38
SF3A3-207ENST00000488934 CDC5LQ99459 802 aaKnown RBP6.45□□□□□ -1.38
SF3A3-207ENST00000488934 POP1Q99575 1024 aaKnown RBP6.45□□□□□ -1.38
SF3A3-207ENST00000488934 OSMRQ99650 979 aa6.45□□□□□ -1.38
SF3A3-207ENST00000488934 CHRDQ9H2X0 955 aa6.45□□□□□ -1.38
SF3A3-207ENST00000488934 SEC31BQ9NQW1 1179 aa6.45□□□□□ -1.38
SF3A3-207ENST00000488934 ATP6V0A2Q9Y487 856 aa6.45□□□□□ -1.38
SF3A3-207ENST00000488934 TAF1P21675 1872 aa6.45□□□□□ -1.38
SF3A3-207ENST00000488934 SNED1Q8TER0 1413 aa6.44□□□□□ -1.38
SF3A3-207ENST00000488934 SPEF2Q9C093 1822 aa6.44□□□□□ -1.38
SF3A3-207ENST00000488934 IQCA1LA6NCM1 817 aa6.44□□□□□ -1.38
SF3A3-207ENST00000488934 TCERG1O14776 1098 aaKnown RBP6.44□□□□□ -1.38
SF3A3-207ENST00000488934 DYRK3O43781 588 aa6.44□□□□□ -1.38
SF3A3-207ENST00000488934 NOS3P29474 1203 aa6.44□□□□□ -1.38
SF3A3-207ENST00000488934 CTSWP56202 376 aa6.44□□□□□ -1.38
SF3A3-207ENST00000488934 DPP8Q6V1X1 898 aaPredicted RBP6.44□□□□□ -1.38
SF3A3-207ENST00000488934 BSNDQ8WZ55 320 aa6.44□□□□□ -1.38
SF3A3-207ENST00000488934 CEP41Q9BYV8 373 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms