RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 RBM28Q9NW13 759 aaKnown RBP18.04■□□□□ 0.48
MCF2L-229ENST00000488765 DACH1Q9UI36 760 aa18.04■□□□□ 0.48
MCF2L-229ENST00000488765 NRKQ7Z2Y5 1582 aa18.03■□□□□ 0.48
MCF2L-229ENST00000488765 A0A087X0B3 334 aa18.03■□□□□ 0.48
MCF2L-229ENST00000488765 PHKG2P15735 406 aa18.03■□□□□ 0.48
MCF2L-229ENST00000488765 GUCY1A2P33402 732 aa18.03■□□□□ 0.48
MCF2L-229ENST00000488765 SCTRP47872 440 aa18.03■□□□□ 0.48
MCF2L-229ENST00000488765 TRIM29Q14134 588 aa18.03■□□□□ 0.48
MCF2L-229ENST00000488765 CCDC96Q2M329 555 aa18.03■□□□□ 0.48
MCF2L-229ENST00000488765 CAPRIN2Q6IMN6 1127 aaKnown RBP18.03■□□□□ 0.48
MCF2L-229ENST00000488765 TLDC1Q6P9B6 456 aa18.03■□□□□ 0.48
MCF2L-229ENST00000488765 NFXL1Q6ZNB6 911 aa18.03■□□□□ 0.48
MCF2L-229ENST00000488765 CCDC26Q8TAB7 109 aa18.03■□□□□ 0.48
MCF2L-229ENST00000488765 TATDN2Q93075 761 aa18.03■□□□□ 0.48
MCF2L-229ENST00000488765 NUP58Q9BVL2 599 aa18.03■□□□□ 0.48
MCF2L-229ENST00000488765 CSRNP2Q9H175 543 aa18.03■□□□□ 0.48
MCF2L-229ENST00000488765 EPB41L5Q9HCM4 733 aa18.03■□□□□ 0.48
MCF2L-229ENST00000488765 AGPAT5Q9NUQ2 364 aa18.03■□□□□ 0.48
MCF2L-229ENST00000488765 hCG_1642624A0A1W2PR95 340 aa18.03■□□□□ 0.48
MCF2L-229ENST00000488765 KIF3CO14782 793 aa18.03■□□□□ 0.48
MCF2L-229ENST00000488765 ANP32DO95626 131 aa18.03■□□□□ 0.48
MCF2L-229ENST00000488765 SPATA4Q8NEY3 305 aa18.03■□□□□ 0.48
MCF2L-229ENST00000488765 SLC52A2Q9HAB3 445 aa18.03■□□□□ 0.48
MCF2L-229ENST00000488765 SLC39A2Q9NP94 309 aa18.03■□□□□ 0.48
MCF2L-229ENST00000488765 GOLGB1Q14789 3259 aaKnown RBP18.03■□□□□ 0.48
MCF2L-229ENST00000488765 FAM170AA1A519 330 aa18.02■□□□□ 0.48
MCF2L-229ENST00000488765 ATP5JP18859 108 aa18.02■□□□□ 0.48
MCF2L-229ENST00000488765 MDH1P40925 334 aaKnown RBP18.02■□□□□ 0.48
MCF2L-229ENST00000488765 TSR1Q2NL82 804 aaKnown RBP18.02■□□□□ 0.48
MCF2L-229ENST00000488765 RRAGBQ5VZM2 374 aa18.02■□□□□ 0.48
MCF2L-229ENST00000488765 ANKRD13DQ6ZTN6 518 aa18.02■□□□□ 0.48
MCF2L-229ENST00000488765 DIAPH2O60879 1101 aa18.02■□□□□ 0.48
MCF2L-229ENST00000488765 GLI1P08151 1106 aa18.02■□□□□ 0.48
MCF2L-229ENST00000488765 USP4Q13107 963 aa18.02■□□□□ 0.48
MCF2L-229ENST00000488765 HLFQ16534 295 aa18.02■□□□□ 0.48
MCF2L-229ENST00000488765 FAM133BQ5BKY9 247 aaKnown RBP18.02■□□□□ 0.48
MCF2L-229ENST00000488765 TRIM68Q6AZZ1 485 aa18.02■□□□□ 0.48
MCF2L-229ENST00000488765 CADPS2Q86UW7 1296 aa18.02■□□□□ 0.48
MCF2L-229ENST00000488765 KCNV2Q8TDN2 545 aa18.02■□□□□ 0.48
MCF2L-229ENST00000488765 SH3GL3Q99963 347 aa18.02■□□□□ 0.48
MCF2L-229ENST00000488765 MYH8P13535 1937 aa18.02■□□□□ 0.47
MCF2L-229ENST00000488765 A0A087WZG4 1122 aa18.02■□□□□ 0.47
MCF2L-229ENST00000488765 MOCS3O95396 460 aa18.02■□□□□ 0.47
MCF2L-229ENST00000488765 PLEKP08567 350 aaPredicted RBP18.02■□□□□ 0.47
MCF2L-229ENST00000488765 METAP2P50579 478 aaKnown RBP eCLIP18.02■□□□□ 0.47
MCF2L-229ENST00000488765 CKAP4Q07065 602 aaKnown RBP18.02■□□□□ 0.47
MCF2L-229ENST00000488765 BZW1Q7L1Q6 419 aaKnown RBP18.02■□□□□ 0.47
MCF2L-229ENST00000488765 LEMD3Q9Y2U8 911 aa18.02■□□□□ 0.47
MCF2L-229ENST00000488765 CEMIPQ8WUJ3 1361 aa18.01■□□□□ 0.47
MCF2L-229ENST00000488765 TARSL2A2RTX5 802 aaKnown RBP18.01■□□□□ 0.47
MCF2L-229ENST00000488765 TRIM49BA6NDI0 452 aa18.01■□□□□ 0.47
MCF2L-229ENST00000488765 FAM205CA6NFA0 338 aa18.01■□□□□ 0.47
MCF2L-229ENST00000488765 PSMD14O00487 310 aa18.01■□□□□ 0.47
MCF2L-229ENST00000488765 PPP6R2O75170 966 aa18.01■□□□□ 0.47
MCF2L-229ENST00000488765 PYGLP06737 847 aa18.01■□□□□ 0.47
MCF2L-229ENST00000488765 PBX1P40424 430 aa18.01■□□□□ 0.47
MCF2L-229ENST00000488765 ADCY2Q08462 1091 aa18.01■□□□□ 0.47
MCF2L-229ENST00000488765 HOMEZQ8IX15 550 aa18.01■□□□□ 0.47
MCF2L-229ENST00000488765 OSBP2Q969R2 916 aa18.01■□□□□ 0.47
MCF2L-229ENST00000488765 LRWD1Q9UFC0 647 aa18.01■□□□□ 0.47
MCF2L-229ENST00000488765 IGKV5-2P06315 115 aa18.01■□□□□ 0.47
MCF2L-229ENST00000488765 ANTXR2P58335 489 aa18.01■□□□□ 0.47
MCF2L-229ENST00000488765 SKOR1P84550 965 aa18.01■□□□□ 0.47
MCF2L-229ENST00000488765 ANKRD20A8PQ5CZ79 823 aa18.01■□□□□ 0.47
MCF2L-229ENST00000488765 KBTBD3Q8NAB2 608 aa18.01■□□□□ 0.47
MCF2L-229ENST00000488765 PRCCQ92733 491 aaPredicted RBP18.01■□□□□ 0.47
MCF2L-229ENST00000488765 DDX21Q9NR30 783 aaKnown RBP eCLIP18.01■□□□□ 0.47
MCF2L-229ENST00000488765 RBM12Q9NTZ6 932 aaKnown RBP18.01■□□□□ 0.47
MCF2L-229ENST00000488765 PAG1Q9NWQ8 432 aa18.01■□□□□ 0.47
MCF2L-229ENST00000488765 CAPN6Q9Y6Q1 641 aa18.01■□□□□ 0.47
MCF2L-229ENST00000488765 ABCC6O95255 1503 aa18.01■□□□□ 0.47
MCF2L-229ENST00000488765 MAST3O60307 1309 aa18.01■□□□□ 0.47
MCF2L-229ENST00000488765 FGAP02671 866 aa18■□□□□ 0.47
MCF2L-229ENST00000488765 CPLX4Q7Z7G2 160 aa18■□□□□ 0.47
MCF2L-229ENST00000488765 THRAP3Q9Y2W1 955 aaKnown RBP18■□□□□ 0.47
MCF2L-229ENST00000488765 ZNF335Q9H4Z2 1342 aaPredicted RBP18■□□□□ 0.47
MCF2L-229ENST00000488765 FAM107AO95990 144 aa18■□□□□ 0.47
MCF2L-229ENST00000488765 TOB1P50616 345 aaPredicted RBP18■□□□□ 0.47
MCF2L-229ENST00000488765 CREG2Q8IUH2 290 aa18■□□□□ 0.47
MCF2L-229ENST00000488765 C3orf20Q8ND61 904 aa18■□□□□ 0.47
MCF2L-229ENST00000488765 MDM1Q8TC05 714 aa18■□□□□ 0.47
MCF2L-229ENST00000488765 NUP133Q8WUM0 1156 aa18■□□□□ 0.47
MCF2L-229ENST00000488765 LUC7L2Q9Y383 392 aaKnown RBP18■□□□□ 0.47
MCF2L-229ENST00000488765 PALLDQ8WX93 1383 aa18■□□□□ 0.47
MCF2L-229ENST00000488765 C8orf74Q6P047 294 aa18■□□□□ 0.47
MCF2L-229ENST00000488765 PIK3R5Q8WYR1 880 aa18■□□□□ 0.47
MCF2L-229ENST00000488765 HVCN1Q96D96 273 aa18■□□□□ 0.47
MCF2L-229ENST00000488765 AGXT2Q9BYV1 514 aa18■□□□□ 0.47
MCF2L-229ENST00000488765 HAUS4Q9H6D7 363 aa18■□□□□ 0.47
MCF2L-229ENST00000488765 ATP6V0A4Q9HBG4 840 aa18■□□□□ 0.47
MCF2L-229ENST00000488765 CABP5Q9NP86 173 aa18■□□□□ 0.47
MCF2L-229ENST00000488765 DCDC2CA8MYV0 355 aa17.99■□□□□ 0.47
MCF2L-229ENST00000488765 BUB1O43683 1085 aa17.99■□□□□ 0.47
MCF2L-229ENST00000488765 KRT86O43790 486 aa17.99■□□□□ 0.47
MCF2L-229ENST00000488765 ATP6V1G2O95670 118 aa17.99■□□□□ 0.47
MCF2L-229ENST00000488765 COPB1P53618 953 aaKnown RBP17.99■□□□□ 0.47
MCF2L-229ENST00000488765 HLTFQ14527 1009 aaKnown RBP eCLIP17.99■□□□□ 0.47
MCF2L-229ENST00000488765 PAPD7Q5XG87 772 aaKnown RBP17.99■□□□□ 0.47
MCF2L-229ENST00000488765 SEC16BQ96JE7 1060 aa17.99■□□□□ 0.47
MCF2L-229ENST00000488765 IPO7O95373 1038 aaKnown RBP17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms