RNA–Protein interactions for RNA: ENST00000488627.5

CTDSP1-209, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 1,118 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-209ENST00000488627 B4E1Z4 1266 aa18.8■□□□□ 0.6
CTDSP1-209ENST00000488627 CYP21A2P08686 494 aa18.8■□□□□ 0.6
CTDSP1-209ENST00000488627 KCTD1Q719H9 257 aa18.8■□□□□ 0.6
CTDSP1-209ENST00000488627 U2AF1L4Q8WU68 220 aaKnown RBP18.8■□□□□ 0.6
CTDSP1-209ENST00000488627 ANKS1AQ92625 1134 aa18.8■□□□□ 0.6
CTDSP1-209ENST00000488627 MAP4K1Q92918 833 aa18.8■□□□□ 0.6
CTDSP1-209ENST00000488627 CHMP4CQ96CF2 233 aa18.8■□□□□ 0.6
CTDSP1-209ENST00000488627 ZKSCAN3Q9BRR0 538 aa18.8■□□□□ 0.6
CTDSP1-209ENST00000488627 RIPK3Q9Y572 518 aa18.8■□□□□ 0.6
CTDSP1-209ENST00000488627 A0A0G2JMZ2 1700 aa18.8■□□□□ 0.6
CTDSP1-209ENST00000488627 RPTORQ8N122 1335 aa18.79■□□□□ 0.6
CTDSP1-209ENST00000488627 ZBED4O75132 1171 aa18.79■□□□□ 0.6
CTDSP1-209ENST00000488627 SGPL1O95470 568 aa18.79■□□□□ 0.6
CTDSP1-209ENST00000488627 ZKSCAN1P17029 563 aaPredicted RBP18.79■□□□□ 0.6
CTDSP1-209ENST00000488627 STAT2P52630 851 aa18.79■□□□□ 0.6
CTDSP1-209ENST00000488627 CACNB2Q08289 660 aaPredicted RBP18.79■□□□□ 0.6
CTDSP1-209ENST00000488627 FAM160B2Q86V87 743 aa18.79■□□□□ 0.6
CTDSP1-209ENST00000488627 DGKHQ86XP1 1220 aa18.79■□□□□ 0.6
CTDSP1-209ENST00000488627 CHURC1Q8WUH1 139 aa18.79■□□□□ 0.6
CTDSP1-209ENST00000488627 TEX13BQ9BXU2 312 aa18.79■□□□□ 0.6
CTDSP1-209ENST00000488627 TAF6LQ9Y6J9 622 aa18.79■□□□□ 0.6
CTDSP1-209ENST00000488627 U3KPZ7 1027 aaPredicted RBP18.79■□□□□ 0.6
CTDSP1-209ENST00000488627 SNHG28P0DPA3 235 aa18.78■□□□□ 0.6
CTDSP1-209ENST00000488627 FCER1AP12319 257 aa18.78■□□□□ 0.6
CTDSP1-209ENST00000488627 TTBK2Q6IQ55 1244 aa18.78■□□□□ 0.6
CTDSP1-209ENST00000488627 UBE2Q1Q7Z7E8 422 aa18.78■□□□□ 0.6
CTDSP1-209ENST00000488627 DCAF4Q8WV16 495 aa18.78■□□□□ 0.6
CTDSP1-209ENST00000488627 DEFB118Q96PH6 123 aa18.78■□□□□ 0.6
CTDSP1-209ENST00000488627 ESYT1Q9BSJ8 1104 aa18.78■□□□□ 0.6
CTDSP1-209ENST00000488627 KRT23Q9C075 422 aa18.78■□□□□ 0.6
CTDSP1-209ENST00000488627 CRISPLD2Q9H0B8 497 aa18.78■□□□□ 0.6
CTDSP1-209ENST00000488627 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.78■□□□□ 0.61e-6■■□□□ 12.9
CTDSP1-209ENST00000488627 RAVER2Q9HCJ3 691 aaKnown RBP18.78■□□□□ 0.6
CTDSP1-209ENST00000488627 ZNF536O15090 1300 aa18.77■□□□□ 0.6
CTDSP1-209ENST00000488627 NEFLP07196 543 aa18.77■□□□□ 0.6
CTDSP1-209ENST00000488627 FDX1P10109 184 aa18.77■□□□□ 0.6
CTDSP1-209ENST00000488627 PDHBP11177 359 aa18.77■□□□□ 0.6
CTDSP1-209ENST00000488627 PRKAR2AP13861 404 aaKnown RBP18.77■□□□□ 0.6
CTDSP1-209ENST00000488627 COPB2P35606 906 aa18.77■□□□□ 0.6
CTDSP1-209ENST00000488627 OAZ1P54368 228 aa18.77■□□□□ 0.6
CTDSP1-209ENST00000488627 SNRNP48Q6IEG0 339 aaKnown RBP18.77■□□□□ 0.6
CTDSP1-209ENST00000488627 BTNL9Q6UXG8 535 aa18.77■□□□□ 0.6
CTDSP1-209ENST00000488627 DPP9Q86TI2 863 aa18.77■□□□□ 0.6
CTDSP1-209ENST00000488627 CPXCR1Q8N123 301 aa18.77■□□□□ 0.6
CTDSP1-209ENST00000488627 ZSCAN10Q96SZ4 725 aaPredicted RBP18.77■□□□□ 0.6
CTDSP1-209ENST00000488627 LSG1Q9H089 658 aaKnown RBP18.77■□□□□ 0.6
CTDSP1-209ENST00000488627 CNNM2Q9H8M5 875 aa18.77■□□□□ 0.6
CTDSP1-209ENST00000488627 HMX1Q9NP08 348 aaPredicted RBP18.77■□□□□ 0.6
CTDSP1-209ENST00000488627 PRR12Q9ULL5 1215 aa18.77■□□□□ 0.6
CTDSP1-209ENST00000488627 MTMR7Q9Y216 660 aa18.77■□□□□ 0.6
CTDSP1-209ENST00000488627 CCDC178Q5BJE1 867 aa18.76■□□□□ 0.59
CTDSP1-209ENST00000488627 OLFML2BQ68BL8 750 aa18.76■□□□□ 0.59
CTDSP1-209ENST00000488627 CYB5R4Q7L1T6 521 aa18.76■□□□□ 0.59
CTDSP1-209ENST00000488627 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.76■□□□□ 0.59
CTDSP1-209ENST00000488627 IQCA1Q86XH1 822 aa18.76■□□□□ 0.59
CTDSP1-209ENST00000488627 ENAHQ8N8S7 591 aaPredicted RBP18.76■□□□□ 0.59
CTDSP1-209ENST00000488627 MMP19Q99542 508 aa18.76■□□□□ 0.59
CTDSP1-209ENST00000488627 PARP14Q460N5 1801 aa18.75■□□□□ 0.59
CTDSP1-209ENST00000488627 CCND3P30281 292 aaPredicted RBP18.75■□□□□ 0.59
CTDSP1-209ENST00000488627 CYP2C19P33261 490 aa18.75■□□□□ 0.59
CTDSP1-209ENST00000488627 ZNF792Q3KQV3 632 aa18.75■□□□□ 0.59
CTDSP1-209ENST00000488627 STOX1Q6ZVD7 989 aa18.75■□□□□ 0.59
CTDSP1-209ENST00000488627 ISY1Q9ULR0 285 aaKnown RBP18.75■□□□□ 0.59
CTDSP1-209ENST00000488627 RBM8AQ9Y5S9 174 aaKnown RBP18.75■□□□□ 0.59
CTDSP1-209ENST00000488627 PGK2P07205 417 aa18.74■□□□□ 0.59
CTDSP1-209ENST00000488627 SLC16A2P36021 539 aa18.74■□□□□ 0.59
CTDSP1-209ENST00000488627 SNAP25P60880 206 aa18.74■□□□□ 0.59
CTDSP1-209ENST00000488627 ZNF543Q08ER8 600 aa18.74■□□□□ 0.59
CTDSP1-209ENST00000488627 SEC23AQ15436 765 aa18.74■□□□□ 0.59
CTDSP1-209ENST00000488627 CCDC96Q2M329 555 aa18.74■□□□□ 0.59
CTDSP1-209ENST00000488627 MFSD14CQ5VZR4 134 aa18.74■□□□□ 0.59
CTDSP1-209ENST00000488627 MAML3Q96JK9 1138 aa18.74■□□□□ 0.59
CTDSP1-209ENST00000488627 AGBL1Q96MI9 1066 aa18.74■□□□□ 0.59
CTDSP1-209ENST00000488627 GPCPD1Q9NPB8 672 aa18.74■□□□□ 0.59
CTDSP1-209ENST00000488627 CTDP1Q9Y5B0 961 aaPredicted RBP18.74■□□□□ 0.59
CTDSP1-209ENST00000488627 FRMPD2Q68DX3 1309 aaPredicted RBP18.74■□□□□ 0.59
CTDSP1-209ENST00000488627 RBBP6Q7Z6E9 1792 aaKnown RBP18.73■□□□□ 0.59
CTDSP1-209ENST00000488627 MYH4Q9Y623 1939 aa18.73■□□□□ 0.59
CTDSP1-209ENST00000488627 DNAJC25-GNG10A0A024R161 153 aa18.73■□□□□ 0.59
CTDSP1-209ENST00000488627 E7EWF7 191 aa18.73■□□□□ 0.59
CTDSP1-209ENST00000488627 CAPN2P17655 700 aa18.73■□□□□ 0.59
CTDSP1-209ENST00000488627 IKQ13123 557 aaPredicted RBP18.73■□□□□ 0.59
CTDSP1-209ENST00000488627 KCTD2Q14681 263 aa18.73■□□□□ 0.59
CTDSP1-209ENST00000488627 ERICH6BQ5W0A0 696 aa18.73■□□□□ 0.59
CTDSP1-209ENST00000488627 LHX8Q68G74 356 aa18.73■□□□□ 0.59
CTDSP1-209ENST00000488627 KIAA1211Q6ZU35 1233 aa18.73■□□□□ 0.59
CTDSP1-209ENST00000488627 PNMA1Q8ND90 353 aa18.73■□□□□ 0.59
CTDSP1-209ENST00000488627 TRPV1Q8NER1 839 aa18.73■□□□□ 0.59
CTDSP1-209ENST00000488627 CHST13Q8NET6 341 aa18.73■□□□□ 0.59
CTDSP1-209ENST00000488627 RANBP17Q9H2T7 1088 aaKnown RBP18.73■□□□□ 0.59
CTDSP1-209ENST00000488627 SLC5A4Q9NY91 659 aa18.73■□□□□ 0.59
CTDSP1-209ENST00000488627 DIS3Q9Y2L1 958 aaKnown RBP18.73■□□□□ 0.59
CTDSP1-209ENST00000488627 TNKSO95271 1327 aa18.73■□□□□ 0.59
CTDSP1-209ENST00000488627 TFRCP02786 760 aaKnown RBP18.72■□□□□ 0.59
CTDSP1-209ENST00000488627 SLC4A3P48751 1232 aa18.72■□□□□ 0.59
CTDSP1-209ENST00000488627 MNX1P50219 401 aaPredicted RBP18.72■□□□□ 0.59
CTDSP1-209ENST00000488627 NECTIN1Q15223 517 aa18.72■□□□□ 0.59
CTDSP1-209ENST00000488627 SYDE2Q5VT97 1194 aa18.72■□□□□ 0.59
CTDSP1-209ENST00000488627 OGDHLQ9ULD0 1010 aa18.72■□□□□ 0.59
CTDSP1-209ENST00000488627 TNRC18O15417 2968 aaPredicted RBP18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms