RNA–Protein interactions for RNA: ENST00000488494.5

ITGB1-215, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-215ENST00000488494 STAG1Q8WVM7 1258 aa20.98■□□□□ 0.95
ITGB1-215ENST00000488494 HTATIP2Q9BUP3 242 aa20.98■□□□□ 0.95
ITGB1-215ENST00000488494 CTDP1Q9Y5B0 961 aaPredicted RBP20.98■□□□□ 0.95
ITGB1-215ENST00000488494 NEDD4P46934 1319 aa20.98■□□□□ 0.95
ITGB1-215ENST00000488494 SLC1A4P43007 532 aa20.97■□□□□ 0.95
ITGB1-215ENST00000488494 STAT2P52630 851 aa20.97■□□□□ 0.95
ITGB1-215ENST00000488494 IKQ13123 557 aaPredicted RBP20.97■□□□□ 0.95
ITGB1-215ENST00000488494 KCTD2Q14681 263 aa20.97■□□□□ 0.95
ITGB1-215ENST00000488494 AKNAD1Q5T1N1 836 aa20.97■□□□□ 0.95
ITGB1-215ENST00000488494 OLFML2BQ68BL8 750 aa20.97■□□□□ 0.95
ITGB1-215ENST00000488494 ANKLE1Q8NAG6 615 aa20.97■□□□□ 0.95
ITGB1-215ENST00000488494 DPF3Q92784 378 aa20.97■□□□□ 0.95
ITGB1-215ENST00000488494 PAWRQ96IZ0 340 aaKnown RBP20.97■□□□□ 0.95
ITGB1-215ENST00000488494 IL25Q9H293 177 aa20.97■□□□□ 0.95
ITGB1-215ENST00000488494 SLC38A10Q9HBR0 1119 aa20.97■□□□□ 0.95
ITGB1-215ENST00000488494 SLC5A4Q9NY91 659 aa20.97■□□□□ 0.95
ITGB1-215ENST00000488494 OGDHLQ9ULD0 1010 aa20.97■□□□□ 0.95
ITGB1-215ENST00000488494 MTMR7Q9Y216 660 aa20.97■□□□□ 0.95
ITGB1-215ENST00000488494 TMEM232C9JQI7 657 aa20.96■□□□□ 0.95
ITGB1-215ENST00000488494 ZBED4O75132 1171 aa20.96■□□□□ 0.95
ITGB1-215ENST00000488494 IGHA2P01877 340 aa20.96■□□□□ 0.95
ITGB1-215ENST00000488494 PGK2P07205 417 aa20.96■□□□□ 0.95
ITGB1-215ENST00000488494 PCP11498 1178 aaKnown RBP20.96■□□□□ 0.95
ITGB1-215ENST00000488494 MCCP23508 829 aa20.96■□□□□ 0.95
ITGB1-215ENST00000488494 NOVP48745 357 aa20.96■□□□□ 0.95
ITGB1-215ENST00000488494 MFSD6Q6ZSS7 791 aa20.96■□□□□ 0.95
ITGB1-215ENST00000488494 CPXCR1Q8N123 301 aa20.96■□□□□ 0.95
ITGB1-215ENST00000488494 ATP2A1O14983 1001 aa20.95■□□□□ 0.94
ITGB1-215ENST00000488494 CYBAP13498 195 aa20.95■□□□□ 0.94
ITGB1-215ENST00000488494 CNGA1P29973 690 aa20.95■□□□□ 0.94
ITGB1-215ENST00000488494 SLC4A3P48751 1232 aa20.95■□□□□ 0.94
ITGB1-215ENST00000488494 KCTD1Q719H9 257 aa20.95■□□□□ 0.94
ITGB1-215ENST00000488494 NECAB2Q7Z6G3 386 aa20.95■□□□□ 0.94
ITGB1-215ENST00000488494 TRPV1Q8NER1 839 aa20.95■□□□□ 0.94
ITGB1-215ENST00000488494 MAML3Q96JK9 1138 aa20.95■□□□□ 0.94
ITGB1-215ENST00000488494 DSCC1Q9BVC3 393 aa20.95■□□□□ 0.94
ITGB1-215ENST00000488494 RNF41Q9H4P4 317 aaPredicted RBP20.95■□□□□ 0.94
ITGB1-215ENST00000488494 RAVER2Q9HCJ3 691 aaKnown RBP20.95■□□□□ 0.94
ITGB1-215ENST00000488494 RIPK3Q9Y572 518 aa20.95■□□□□ 0.94
ITGB1-215ENST00000488494 H0YGN5 161 aa20.94■□□□□ 0.94
ITGB1-215ENST00000488494 ZNF213O14771 459 aa20.94■□□□□ 0.94
ITGB1-215ENST00000488494 MNX1P50219 401 aaPredicted RBP20.94■□□□□ 0.94
ITGB1-215ENST00000488494 CCDC96Q2M329 555 aa20.94■□□□□ 0.94
ITGB1-215ENST00000488494 LHX8Q68G74 356 aa20.94■□□□□ 0.94
ITGB1-215ENST00000488494 FAM160B2Q86V87 743 aa20.94■□□□□ 0.94
ITGB1-215ENST00000488494 RAD50Q92878 1312 aa20.94■□□□□ 0.94
ITGB1-215ENST00000488494 PLXNA1Q9UIW2 1896 aa20.93■□□□□ 0.94
ITGB1-215ENST00000488494 DCAF4Q8WV16 495 aa20.93■□□□□ 0.94
ITGB1-215ENST00000488494 ESR2Q92731 530 aa20.93■□□□□ 0.94
ITGB1-215ENST00000488494 TMEM47Q9BQJ4 181 aa20.93■□□□□ 0.94
ITGB1-215ENST00000488494 TCP11L1Q9NUJ3 509 aa20.93■□□□□ 0.94
ITGB1-215ENST00000488494 DDX20Q9UHI6 824 aaKnown RBP20.93■□□□□ 0.94
ITGB1-215ENST00000488494 CEP290O15078 2479 aa20.92■□□□□ 0.94
ITGB1-215ENST00000488494 TOP1P11387 765 aaKnown RBP20.92■□□□□ 0.94
ITGB1-215ENST00000488494 OAZ1P54368 228 aa20.92■□□□□ 0.94
ITGB1-215ENST00000488494 CHURC1Q8WUH1 139 aa20.92■□□□□ 0.94
ITGB1-215ENST00000488494 C11orf49Q9H6J7 331 aa20.92■□□□□ 0.94
ITGB1-215ENST00000488494 HOMER2Q9NSB8 354 aa20.92■□□□□ 0.94
ITGB1-215ENST00000488494 ALPK3Q96L96 1907 aa20.92■□□□□ 0.94
ITGB1-215ENST00000488494 MSCO60682 206 aa20.91■□□□□ 0.94
ITGB1-215ENST00000488494 IMMTQ16891 758 aaKnown RBP20.91■□□□□ 0.94
ITGB1-215ENST00000488494 ZNF792Q3KQV3 632 aa20.91■□□□□ 0.94
ITGB1-215ENST00000488494 RCSD1Q6JBY9 416 aa20.91■□□□□ 0.94
ITGB1-215ENST00000488494 CTNNA3Q9UI47 895 aa20.91■□□□□ 0.94
ITGB1-215ENST00000488494 PFASO15067 1338 aa20.9■□□□□ 0.94
ITGB1-215ENST00000488494 FRMPD2Q68DX3 1309 aaPredicted RBP20.9■□□□□ 0.94
ITGB1-215ENST00000488494 PLA2G6O60733 806 aa20.9■□□□□ 0.94
ITGB1-215ENST00000488494 FDX1P10109 184 aa20.9■□□□□ 0.94
ITGB1-215ENST00000488494 CHMLP26374 656 aa20.9■□□□□ 0.94
ITGB1-215ENST00000488494 SNAP25P60880 206 aa20.9■□□□□ 0.94
ITGB1-215ENST00000488494 ZKSCAN3Q9BRR0 538 aa20.9■□□□□ 0.94
ITGB1-215ENST00000488494 PRR12Q9ULL5 1215 aa20.9■□□□□ 0.94
ITGB1-215ENST00000488494 B4E1Z4 1266 aa20.89■□□□□ 0.93
ITGB1-215ENST00000488494 EVI5O60447 810 aa20.89■□□□□ 0.93
ITGB1-215ENST00000488494 KDM4AO75164 1064 aa20.89■□□□□ 0.93
ITGB1-215ENST00000488494 PRAMEF19Q5SWL8 479 aa20.89■□□□□ 0.93
ITGB1-215ENST00000488494 CCDC174Q6PII3 467 aa20.89■□□□□ 0.93
ITGB1-215ENST00000488494 RUFY2Q8WXA3 655 aa20.89■□□□□ 0.93
ITGB1-215ENST00000488494 DDX11Q96FC9 970 aa20.89■□□□□ 0.93
ITGB1-215ENST00000488494 AGBL1Q96MI9 1066 aa20.89■□□□□ 0.93
ITGB1-215ENST00000488494 FBXO40Q9UH90 709 aa20.89■□□□□ 0.93
ITGB1-215ENST00000488494 DIS3Q9Y2L1 958 aaKnown RBP20.89■□□□□ 0.93
ITGB1-215ENST00000488494 ZNFX1Q9P2E3 1918 aaKnown RBP20.88■□□□□ 0.93
ITGB1-215ENST00000488494 ZNF536O15090 1300 aa20.88■□□□□ 0.93
ITGB1-215ENST00000488494 SEPT4O43236 478 aa20.88■□□□□ 0.93
ITGB1-215ENST00000488494 SLC16A2P36021 539 aa20.88■□□□□ 0.93
ITGB1-215ENST00000488494 ANO1Q5XXA6 986 aa20.88■□□□□ 0.93
ITGB1-215ENST00000488494 TTBK2Q6IQ55 1244 aa20.88■□□□□ 0.93
ITGB1-215ENST00000488494 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.88■□□□□ 0.93
ITGB1-215ENST00000488494 CHST13Q8NET6 341 aa20.88■□□□□ 0.93
ITGB1-215ENST00000488494 TINF2Q9BSI4 451 aa20.88■□□□□ 0.93
ITGB1-215ENST00000488494 RNF146Q9NTX7 359 aa20.88■□□□□ 0.93
ITGB1-215ENST00000488494 NR2E3Q9Y5X4 410 aa20.88■□□□□ 0.93
ITGB1-215ENST00000488494 DNAH12Q6ZR08 3092 aa20.88■□□□□ 0.93
ITGB1-215ENST00000488494 DNAJC25-GNG10A0A024R161 153 aa20.87■□□□□ 0.93
ITGB1-215ENST00000488494 PDHBP11177 359 aa20.87■□□□□ 0.93
ITGB1-215ENST00000488494 COL6A1P12109 1028 aa20.87■□□□□ 0.93
ITGB1-215ENST00000488494 NT5C2P49902 561 aa20.87■□□□□ 0.93
ITGB1-215ENST00000488494 C7orf61Q8IZ16 206 aa20.87■□□□□ 0.93
ITGB1-215ENST00000488494 ANKRD35Q8N283 1001 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms