RNA–Protein interactions for RNA: ENST00000488463.5

COL9A2-208, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 1,005 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-208ENST00000488463 CTNNA3Q9UI47 895 aa16.77■□□□□ 0.28
COL9A2-208ENST00000488463 RIPK3Q9Y572 518 aa16.77■□□□□ 0.28
COL9A2-208ENST00000488463 TMEM232C9JQI7 657 aa16.76■□□□□ 0.27
COL9A2-208ENST00000488463 KDM4AO75164 1064 aa16.76■□□□□ 0.27
COL9A2-208ENST00000488463 SLC25A27O95847 323 aa16.76■□□□□ 0.27
COL9A2-208ENST00000488463 CYP21A2P08686 494 aa16.76■□□□□ 0.27
COL9A2-208ENST00000488463 TOP1P11387 765 aaKnown RBP16.76■□□□□ 0.27
COL9A2-208ENST00000488463 ADORA2AP29274 412 aa16.76■□□□□ 0.27
COL9A2-208ENST00000488463 NT5C2P49902 561 aa16.76■□□□□ 0.27
COL9A2-208ENST00000488463 CACNB2Q08289 660 aaPredicted RBP16.76■□□□□ 0.27
COL9A2-208ENST00000488463 PLS1Q14651 629 aa16.76■□□□□ 0.27
COL9A2-208ENST00000488463 WDR78Q5VTH9 848 aa16.76■□□□□ 0.27
COL9A2-208ENST00000488463 TRMT44Q8IYL2 757 aaKnown RBP16.76■□□□□ 0.27
COL9A2-208ENST00000488463 U2AF1L4Q8WU68 220 aaKnown RBP16.76■□□□□ 0.27
COL9A2-208ENST00000488463 ANKS1AQ92625 1134 aa16.76■□□□□ 0.27
COL9A2-208ENST00000488463 ESR2Q92731 530 aa16.76■□□□□ 0.27
COL9A2-208ENST00000488463 MAP4K1Q92918 833 aa16.76■□□□□ 0.27
COL9A2-208ENST00000488463 TTC14Q96N46 770 aa16.76■□□□□ 0.27
COL9A2-208ENST00000488463 CRISPLD2Q9H0B8 497 aa16.76■□□□□ 0.27
COL9A2-208ENST00000488463 PLXNA1Q9UIW2 1896 aa16.76■□□□□ 0.27
COL9A2-208ENST00000488463 ZNF536O15090 1300 aa16.75■□□□□ 0.27
COL9A2-208ENST00000488463 RPTORQ8N122 1335 aa16.75■□□□□ 0.27
COL9A2-208ENST00000488463 B4E1Z4 1266 aa16.75■□□□□ 0.27
COL9A2-208ENST00000488463 SGPL1O95470 568 aa16.75■□□□□ 0.27
COL9A2-208ENST00000488463 SNHG28P0DPA3 235 aa16.75■□□□□ 0.27
COL9A2-208ENST00000488463 ZKSCAN1P17029 563 aaPredicted RBP16.75■□□□□ 0.27
COL9A2-208ENST00000488463 SLC1A4P43007 532 aa16.75■□□□□ 0.27
COL9A2-208ENST00000488463 KCTD1Q719H9 257 aa16.75■□□□□ 0.27
COL9A2-208ENST00000488463 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.75■□□□□ 0.27
COL9A2-208ENST00000488463 NCAPG2Q86XI2 1143 aa16.75■□□□□ 0.27
COL9A2-208ENST00000488463 KIFC2Q96AC6 838 aa16.75■□□□□ 0.27
COL9A2-208ENST00000488463 CHMP4CQ96CF2 233 aa16.75■□□□□ 0.27
COL9A2-208ENST00000488463 CCDC136Q96JN2 1154 aa16.75■□□□□ 0.27
COL9A2-208ENST00000488463 ZKSCAN3Q9BRR0 538 aa16.75■□□□□ 0.27
COL9A2-208ENST00000488463 TEX13BQ9BXU2 312 aa16.75■□□□□ 0.27
COL9A2-208ENST00000488463 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.75■□□□□ 0.27
COL9A2-208ENST00000488463 ZSWIM5Q9P217 1185 aa16.75■□□□□ 0.27
COL9A2-208ENST00000488463 IVNS1ABPQ9Y6Y0 642 aa16.75■□□□□ 0.27
COL9A2-208ENST00000488463 PRKAR2AP13861 404 aaKnown RBP16.74■□□□□ 0.27
COL9A2-208ENST00000488463 STAT2P52630 851 aa16.74■□□□□ 0.27
COL9A2-208ENST00000488463 SNRNP48Q6IEG0 339 aaKnown RBP16.74■□□□□ 0.27
COL9A2-208ENST00000488463 BTNL9Q6UXG8 535 aa16.74■□□□□ 0.27
COL9A2-208ENST00000488463 DGKHQ86XP1 1220 aa16.74■□□□□ 0.27
COL9A2-208ENST00000488463 DCAF4Q8WV16 495 aa16.74■□□□□ 0.27
COL9A2-208ENST00000488463 DEFB118Q96PH6 123 aa16.74■□□□□ 0.27
COL9A2-208ENST00000488463 ESYT1Q9BSJ8 1104 aa16.74■□□□□ 0.27
COL9A2-208ENST00000488463 LSG1Q9H089 658 aaKnown RBP16.74■□□□□ 0.27
COL9A2-208ENST00000488463 FRMPD3Q5JV73 1810 aa16.74■□□□□ 0.27
COL9A2-208ENST00000488463 PDHBP11177 359 aa16.73■□□□□ 0.27
COL9A2-208ENST00000488463 OAZ1P54368 228 aa16.73■□□□□ 0.27
COL9A2-208ENST00000488463 OLFML2BQ68BL8 750 aa16.73■□□□□ 0.27
COL9A2-208ENST00000488463 TTBK2Q6IQ55 1244 aa16.73■□□□□ 0.27
COL9A2-208ENST00000488463 STOX1Q6ZVD7 989 aa16.73■□□□□ 0.27
COL9A2-208ENST00000488463 CYB5R4Q7L1T6 521 aa16.73■□□□□ 0.27
COL9A2-208ENST00000488463 FAM160B2Q86V87 743 aa16.73■□□□□ 0.27
COL9A2-208ENST00000488463 ENAHQ8N8S7 591 aaPredicted RBP16.73■□□□□ 0.27
COL9A2-208ENST00000488463 CHURC1Q8WUH1 139 aa16.73■□□□□ 0.27
COL9A2-208ENST00000488463 CWC22Q9HCG8 908 aaKnown RBP16.73■□□□□ 0.27
COL9A2-208ENST00000488463 RAVER2Q9HCJ3 691 aaKnown RBP16.73■□□□□ 0.27
COL9A2-208ENST00000488463 PCDH10Q9P2E7 1040 aa16.73■□□□□ 0.27
COL9A2-208ENST00000488463 PRR12Q9ULL5 1215 aa16.73■□□□□ 0.27
COL9A2-208ENST00000488463 U3KPZ7 1027 aaPredicted RBP16.73■□□□□ 0.27
COL9A2-208ENST00000488463 ZBED4O75132 1171 aa16.72■□□□□ 0.27
COL9A2-208ENST00000488463 FDX1P10109 184 aa16.72■□□□□ 0.27
COL9A2-208ENST00000488463 FCER1AP12319 257 aa16.72■□□□□ 0.27
COL9A2-208ENST00000488463 CCND3P30281 292 aaPredicted RBP16.72■□□□□ 0.27
COL9A2-208ENST00000488463 COPB2P35606 906 aa16.72■□□□□ 0.27
COL9A2-208ENST00000488463 MNX1P50219 401 aaPredicted RBP16.72■□□□□ 0.27
COL9A2-208ENST00000488463 TRPV1Q8NER1 839 aa16.72■□□□□ 0.27
COL9A2-208ENST00000488463 ZSCAN10Q96SZ4 725 aaPredicted RBP16.72■□□□□ 0.27
COL9A2-208ENST00000488463 KRT23Q9C075 422 aa16.72■□□□□ 0.27
COL9A2-208ENST00000488463 HMX1Q9NP08 348 aaPredicted RBP16.72■□□□□ 0.27
COL9A2-208ENST00000488463 DNAJC25-GNG10A0A024R161 153 aa16.71■□□□□ 0.27
COL9A2-208ENST00000488463 CYP2C19P33261 490 aa16.71■□□□□ 0.27
COL9A2-208ENST00000488463 ZNF543Q08ER8 600 aa16.71■□□□□ 0.27
COL9A2-208ENST00000488463 SEC23AQ15436 765 aa16.71■□□□□ 0.27
COL9A2-208ENST00000488463 ZNF792Q3KQV3 632 aa16.71■□□□□ 0.27
COL9A2-208ENST00000488463 LHX8Q68G74 356 aa16.71■□□□□ 0.27
COL9A2-208ENST00000488463 DPP9Q86TI2 863 aa16.71■□□□□ 0.27
COL9A2-208ENST00000488463 CPXCR1Q8N123 301 aa16.71■□□□□ 0.27
COL9A2-208ENST00000488463 MAML3Q96JK9 1138 aa16.71■□□□□ 0.27
COL9A2-208ENST00000488463 CNNM2Q9H8M5 875 aa16.71■□□□□ 0.27
COL9A2-208ENST00000488463 MTMR7Q9Y216 660 aa16.71■□□□□ 0.27
COL9A2-208ENST00000488463 RBM8AQ9Y5S9 174 aaKnown RBP16.71■□□□□ 0.27
COL9A2-208ENST00000488463 E7EWF7 191 aa16.7■□□□□ 0.26
COL9A2-208ENST00000488463 PGK2P07205 417 aa16.7■□□□□ 0.26
COL9A2-208ENST00000488463 CYBAP13498 195 aa16.7■□□□□ 0.26
COL9A2-208ENST00000488463 SLC16A2P36021 539 aa16.7■□□□□ 0.26
COL9A2-208ENST00000488463 SNAP25P60880 206 aa16.7■□□□□ 0.26
COL9A2-208ENST00000488463 COL9A3Q14050 684 aaPredicted RBP16.7■□□□□ 0.26
COL9A2-208ENST00000488463 CCDC178Q5BJE1 867 aa16.7■□□□□ 0.26
COL9A2-208ENST00000488463 IQCA1Q86XH1 822 aa16.7■□□□□ 0.26
COL9A2-208ENST00000488463 FGD4Q96M96 766 aa16.7■□□□□ 0.26
COL9A2-208ENST00000488463 AGBL1Q96MI9 1066 aa16.7■□□□□ 0.26
COL9A2-208ENST00000488463 MMP19Q99542 508 aa16.7■□□□□ 0.26
COL9A2-208ENST00000488463 RANBP17Q9H2T7 1088 aaKnown RBP16.7■□□□□ 0.26
COL9A2-208ENST00000488463 OGDHLQ9ULD0 1010 aa16.7■□□□□ 0.26
COL9A2-208ENST00000488463 DIS3Q9Y2L1 958 aaKnown RBP16.7■□□□□ 0.26
COL9A2-208ENST00000488463 LCTP09848 1927 aa16.7■□□□□ 0.26
COL9A2-208ENST00000488463 TNKSO95271 1327 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms