RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 HDAC8Q9BY41 377 aa6.75□□□□□ -1.33
ITGB1-214ENST00000488427 TRIM55Q9BYV6 548 aa6.75□□□□□ -1.33
ITGB1-214ENST00000488427 DIS3Q9Y2L1 958 aaKnown RBP6.75□□□□□ -1.33
ITGB1-214ENST00000488427 ANKRD34BA5PLL1 514 aa6.74□□□□□ -1.33
ITGB1-214ENST00000488427 PRAMEF1O95521 474 aa6.74□□□□□ -1.33
ITGB1-214ENST00000488427 AFMP43652 599 aa6.74□□□□□ -1.33
ITGB1-214ENST00000488427 CHRNEQ04844 493 aa6.74□□□□□ -1.33
ITGB1-214ENST00000488427 ZYXQ15942 572 aaKnown RBP6.74□□□□□ -1.33
ITGB1-214ENST00000488427 LARP1BQ659C4 914 aaKnown RBP6.74□□□□□ -1.33
ITGB1-214ENST00000488427 ADAT2Q7Z6V5 191 aaKnown RBP6.74□□□□□ -1.33
ITGB1-214ENST00000488427 ATG4DQ86TL0 474 aaPredicted RBP6.74□□□□□ -1.33
ITGB1-214ENST00000488427 SPPL2CQ8IUH8 684 aa6.74□□□□□ -1.33
ITGB1-214ENST00000488427 LINC00116Q8NCU8 138 aa6.74□□□□□ -1.33
ITGB1-214ENST00000488427 ZNF408Q9H9D4 720 aa6.74□□□□□ -1.33
ITGB1-214ENST00000488427 GP6Q9HCN6 339 aa6.74□□□□□ -1.33
ITGB1-214ENST00000488427 GFOD1Q9NXC2 390 aa6.74□□□□□ -1.33
ITGB1-214ENST00000488427 SLAMF8Q9P0V8 285 aa6.74□□□□□ -1.33
ITGB1-214ENST00000488427 TMEM59LQ9UK28 342 aa6.74□□□□□ -1.33
ITGB1-214ENST00000488427 C9IYK1 514 aa6.73□□□□□ -1.33
ITGB1-214ENST00000488427 AGRPO00253 132 aa6.73□□□□□ -1.33
ITGB1-214ENST00000488427 ESR1P03372 595 aa6.73□□□□□ -1.33
ITGB1-214ENST00000488427 CD247P20963 164 aa6.73□□□□□ -1.33
ITGB1-214ENST00000488427 BMP8BP34820 402 aa6.73□□□□□ -1.33
ITGB1-214ENST00000488427 GDNFP39905 211 aa6.73□□□□□ -1.33
ITGB1-214ENST00000488427 CD96P40200 585 aa6.73□□□□□ -1.33
ITGB1-214ENST00000488427 AXDND1Q5T1B0 1012 aaPredicted RBP6.73□□□□□ -1.33
ITGB1-214ENST00000488427 KIAA1211LQ6NV74 962 aa6.73□□□□□ -1.33
ITGB1-214ENST00000488427 TMC3Q7Z5M5 1100 aa6.73□□□□□ -1.33
ITGB1-214ENST00000488427 FAM169BQ8N8A8 192 aa6.73□□□□□ -1.33
ITGB1-214ENST00000488427 TCTN2Q96GX1 697 aa6.73□□□□□ -1.33
ITGB1-214ENST00000488427 APBA2Q99767 749 aa6.73□□□□□ -1.33
ITGB1-214ENST00000488427 EPN3Q9H201 632 aa6.73□□□□□ -1.33
ITGB1-214ENST00000488427 TCFL5Q9UL49 500 aa6.73□□□□□ -1.33
ITGB1-214ENST00000488427 SUGT1Q9Y2Z0 365 aa6.73□□□□□ -1.33
ITGB1-214ENST00000488427 PCDHA11Q9Y5I1 949 aa6.73□□□□□ -1.33
ITGB1-214ENST00000488427 LTBP3Q9NS15 1303 aa6.73□□□□□ -1.33
ITGB1-214ENST00000488427 NOP56O00567 594 aaKnown RBP6.72□□□□□ -1.33
ITGB1-214ENST00000488427 DDAH1O94760 285 aa6.72□□□□□ -1.33
ITGB1-214ENST00000488427 POU4F1Q01851 419 aa6.72□□□□□ -1.33
ITGB1-214ENST00000488427 DCAF15Q66K64 600 aa6.72□□□□□ -1.33
ITGB1-214ENST00000488427 EEPD1Q7L9B9 569 aa6.72□□□□□ -1.33
ITGB1-214ENST00000488427 PPFIBP1Q86W92 1011 aa6.72□□□□□ -1.33
ITGB1-214ENST00000488427 FLAD1Q8NFF5 587 aa6.72□□□□□ -1.33
ITGB1-214ENST00000488427 MBNL3Q9NUK0 354 aaKnown RBP6.72□□□□□ -1.33
ITGB1-214ENST00000488427 BICRAQ9NZM4 1560 aa6.71□□□□□ -1.34
ITGB1-214ENST00000488427 SHISA3A0PJX4 238 aa6.71□□□□□ -1.34
ITGB1-214ENST00000488427 FITM1A5D6W6 292 aa6.71□□□□□ -1.34
ITGB1-214ENST00000488427 PAPLNO95428 1278 aa6.71□□□□□ -1.34
ITGB1-214ENST00000488427 RNASE1P07998 156 aaKnown RBP6.71□□□□□ -1.34
ITGB1-214ENST00000488427 SYPP08247 313 aa6.71□□□□□ -1.34
ITGB1-214ENST00000488427 ETFBP38117 255 aa6.71□□□□□ -1.34
ITGB1-214ENST00000488427 RANGAP1P46060 587 aaPredicted RBP6.71□□□□□ -1.34
ITGB1-214ENST00000488427 ANKS3Q6ZW76 656 aa6.71□□□□□ -1.34
ITGB1-214ENST00000488427 WFDC3Q8IUB2 231 aa6.71□□□□□ -1.34
ITGB1-214ENST00000488427 FAM178BQ8IXR5 827 aa6.71□□□□□ -1.34
ITGB1-214ENST00000488427 FIBCD1Q8N539 461 aa6.71□□□□□ -1.34
ITGB1-214ENST00000488427 ANKS4BQ8N8V4 417 aa6.71□□□□□ -1.34
ITGB1-214ENST00000488427 PDZD8Q8NEN9 1154 aa6.71□□□□□ -1.34
ITGB1-214ENST00000488427 SREK1Q8WXA9 508 aaKnown RBP6.71□□□□□ -1.34
ITGB1-214ENST00000488427 FAM86C1Q9NVL1 165 aa6.71□□□□□ -1.34
ITGB1-214ENST00000488427 ZMYM5Q9UJ78 669 aa6.71□□□□□ -1.34
ITGB1-214ENST00000488427 RPL10P27635 214 aaKnown RBP6.7□□□□□ -1.34
ITGB1-214ENST00000488427 GRB10Q13322 594 aa6.7□□□□□ -1.34
ITGB1-214ENST00000488427 SNW1Q13573 536 aaKnown RBP6.7□□□□□ -1.34
ITGB1-214ENST00000488427 WAPLQ7Z5K2 1190 aa6.7□□□□□ -1.34
ITGB1-214ENST00000488427 LILRA2Q8N149 483 aa6.7□□□□□ -1.34
ITGB1-214ENST00000488427 NAT16Q8N8M0 369 aa6.7□□□□□ -1.34
ITGB1-214ENST00000488427 LRRN4CLQ8ND94 238 aa6.7□□□□□ -1.34
ITGB1-214ENST00000488427 RCC1LQ96I51 464 aaKnown RBP6.7□□□□□ -1.34
ITGB1-214ENST00000488427 KLHL25Q9H0H3 589 aa6.7□□□□□ -1.34
ITGB1-214ENST00000488427 ZNF451Q9Y4E5 1061 aa6.7□□□□□ -1.34
ITGB1-214ENST00000488427 IQCA1LA6NCM1 817 aa6.69□□□□□ -1.34
ITGB1-214ENST00000488427 MEIS1O00470 390 aa6.69□□□□□ -1.34
ITGB1-214ENST00000488427 EPHX1P07099 455 aa6.69□□□□□ -1.34
ITGB1-214ENST00000488427 GTF2F1P35269 517 aaKnown RBP eCLIP6.69□□□□□ -1.34
ITGB1-214ENST00000488427 KIR2DL1P43626 348 aaPredicted RBP6.69□□□□□ -1.34
ITGB1-214ENST00000488427 KIR2DL2P43627 348 aaPredicted RBP6.69□□□□□ -1.34
ITGB1-214ENST00000488427 ZNF445P59923 1031 aa6.69□□□□□ -1.34
ITGB1-214ENST00000488427 TEKQ02763 1124 aa6.69□□□□□ -1.34
ITGB1-214ENST00000488427 ZNF648Q5T619 568 aaPredicted RBP6.69□□□□□ -1.34
ITGB1-214ENST00000488427 CYP2R1Q6VVX0 501 aa6.69□□□□□ -1.34
ITGB1-214ENST00000488427 FCRL2Q96LA5 508 aaPredicted RBP6.69□□□□□ -1.34
ITGB1-214ENST00000488427 KRTAP4-9Q9BYQ8 210 aa6.69□□□□□ -1.34
ITGB1-214ENST00000488427 FOXP3Q9BZS1 431 aa6.69□□□□□ -1.34
ITGB1-214ENST00000488427 NOL6Q9H6R4 1146 aaKnown RBP6.69□□□□□ -1.34
ITGB1-214ENST00000488427 PCDHB10Q9UN67 800 aa6.69□□□□□ -1.34
ITGB1-214ENST00000488427 TRBV23OR9-2A0A075B6M9 112 aa6.68□□□□□ -1.34
ITGB1-214ENST00000488427 SHOXO15266 292 aa6.68□□□□□ -1.34
ITGB1-214ENST00000488427 CBFA2T2O43439 604 aa6.68□□□□□ -1.34
ITGB1-214ENST00000488427 ZNF205O95201 554 aa6.68□□□□□ -1.34
ITGB1-214ENST00000488427 AMPD2Q01433 879 aa6.68□□□□□ -1.34
ITGB1-214ENST00000488427 SNX17Q15036 470 aa6.68□□□□□ -1.34
ITGB1-214ENST00000488427 SLC14A2Q15849 920 aa6.68□□□□□ -1.34
ITGB1-214ENST00000488427 C6orf15Q6UXA7 325 aaPredicted RBP6.68□□□□□ -1.34
ITGB1-214ENST00000488427 USHBP1Q8N6Y0 703 aa6.68□□□□□ -1.34
ITGB1-214ENST00000488427 KLHL6Q8WZ60 621 aa6.68□□□□□ -1.34
ITGB1-214ENST00000488427 PPP1R14AQ96A00 147 aa6.68□□□□□ -1.34
ITGB1-214ENST00000488427 CDADC1Q9BWV3 514 aa6.68□□□□□ -1.34
ITGB1-214ENST00000488427 FAM53CQ9NYF3 392 aa6.68□□□□□ -1.34
ITGB1-214ENST00000488427 LRP2BPQ9P2M1 347 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms