RNA–Protein interactions for RNA: ENST00000488344.6

VAMP7-206, Transcript of vesicle associated membrane protein 7, humanhuman

TSL 2

Gene VAMP7, Length 696 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP7-206ENST00000488344 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.38□□□□□ -0.27
VAMP7-206ENST00000488344 NAPBQ9H115 298 aa13.38□□□□□ -0.27
VAMP7-206ENST00000488344 XPNPEP3Q9NQH7 507 aa13.38□□□□□ -0.27
VAMP7-206ENST00000488344 CLIP2Q9UDT6 1046 aa13.38□□□□□ -0.27
VAMP7-206ENST00000488344 FEM1BQ9UK73 627 aa13.38□□□□□ -0.27
VAMP7-206ENST00000488344 ATP11BQ9Y2G3 1177 aa13.38□□□□□ -0.27
VAMP7-206ENST00000488344 PLIN4Q96Q06 1357 aa13.37□□□□□ -0.27
VAMP7-206ENST00000488344 NDUFB10O96000 172 aa13.37□□□□□ -0.27
VAMP7-206ENST00000488344 MX1P20591 662 aa13.37□□□□□ -0.27
VAMP7-206ENST00000488344 FAM47AQ5JRC9 791 aa13.37□□□□□ -0.27
VAMP7-206ENST00000488344 C1orf53Q5VUE5 145 aa13.37□□□□□ -0.27
VAMP7-206ENST00000488344 TSHZ3Q63HK5 1081 aa13.37□□□□□ -0.27
VAMP7-206ENST00000488344 SLC39A5Q6ZMH5 540 aa13.37□□□□□ -0.27
VAMP7-206ENST00000488344 IFNL3Q8IZI9 196 aa13.37□□□□□ -0.27
VAMP7-206ENST00000488344 STK11IPQ8N1F8 1099 aa13.37□□□□□ -0.27
VAMP7-206ENST00000488344 GMCL1P1Q8NEA9 526 aa13.37□□□□□ -0.27
VAMP7-206ENST00000488344 REPS2Q8NFH8 660 aa13.37□□□□□ -0.27
VAMP7-206ENST00000488344 MKL1Q969V6 931 aa13.37□□□□□ -0.27
VAMP7-206ENST00000488344 EPB41L4AQ9HCS5 686 aaPredicted RBP13.37□□□□□ -0.27
VAMP7-206ENST00000488344 MTMR4Q9NYA4 1195 aa13.37□□□□□ -0.27
VAMP7-206ENST00000488344 SYNGAP1Q96PV0 1343 aa13.37□□□□□ -0.27
VAMP7-206ENST00000488344 IGKV6D-41A0A0C4DH26 115 aa13.36□□□□□ -0.27
VAMP7-206ENST00000488344 M0R2C6 588 aa13.36□□□□□ -0.27
VAMP7-206ENST00000488344 PGK2P07205 417 aa13.36□□□□□ -0.27
VAMP7-206ENST00000488344 ADCYAP1R1P41586 468 aa13.36□□□□□ -0.27
VAMP7-206ENST00000488344 CLCN6P51797 869 aa13.36□□□□□ -0.27
VAMP7-206ENST00000488344 OAZ1P54368 228 aa13.36□□□□□ -0.27
VAMP7-206ENST00000488344 SNX17Q15036 470 aa13.36□□□□□ -0.27
VAMP7-206ENST00000488344 PRAMEF19Q5SWL8 479 aa13.36□□□□□ -0.27
VAMP7-206ENST00000488344 ANO1Q5XXA6 986 aa13.36□□□□□ -0.27
VAMP7-206ENST00000488344 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.36□□□□□ -0.27
VAMP7-206ENST00000488344 ZNF467Q7Z7K2 595 aaPredicted RBP13.36□□□□□ -0.27
VAMP7-206ENST00000488344 CHST13Q8NET6 341 aa13.36□□□□□ -0.27
VAMP7-206ENST00000488344 CEP95Q96GE4 821 aa13.36□□□□□ -0.27
VAMP7-206ENST00000488344 NUP88Q99567 741 aaPredicted RBP13.36□□□□□ -0.27
VAMP7-206ENST00000488344 PHF24Q9UPV7 400 aa13.36□□□□□ -0.27
VAMP7-206ENST00000488344 ALPK3Q96L96 1907 aa13.36□□□□□ -0.27
VAMP7-206ENST00000488344 PPARAQ07869 468 aa13.35□□□□□ -0.27
VAMP7-206ENST00000488344 ZMYM1Q5SVZ6 1142 aa13.35□□□□□ -0.27
VAMP7-206ENST00000488344 FAM160B2Q86V87 743 aa13.35□□□□□ -0.27
VAMP7-206ENST00000488344 NEDD1Q8NHV4 660 aa13.35□□□□□ -0.27
VAMP7-206ENST00000488344 PI4K2BQ8TCG2 481 aa13.35□□□□□ -0.27
VAMP7-206ENST00000488344 CHURC1Q8WUH1 139 aa13.35□□□□□ -0.27
VAMP7-206ENST00000488344 KIFC2Q96AC6 838 aa13.35□□□□□ -0.27
VAMP7-206ENST00000488344 TSEN34Q9BSV6 310 aaKnown RBP13.35□□□□□ -0.27
VAMP7-206ENST00000488344 PRDM5Q9NQX1 630 aaPredicted RBP13.35□□□□□ -0.27
VAMP7-206ENST00000488344 FAM184BQ9ULE4 1060 aa13.35□□□□□ -0.27
VAMP7-206ENST00000488344 PRDM1O75626 825 aa13.34□□□□□ -0.27
VAMP7-206ENST00000488344 BMP3P12645 472 aa13.34□□□□□ -0.27
VAMP7-206ENST00000488344 STAT2P52630 851 aa13.34□□□□□ -0.27
VAMP7-206ENST00000488344 TRIM60Q495X7 471 aa13.34□□□□□ -0.27
VAMP7-206ENST00000488344 FAM109BQ6ICB4 259 aaPredicted RBP13.34□□□□□ -0.27
VAMP7-206ENST00000488344 MAMDC4Q6UXC1 1216 aa13.34□□□□□ -0.27
VAMP7-206ENST00000488344 TICAM2Q86XR7 235 aa13.34□□□□□ -0.27
VAMP7-206ENST00000488344 CPXCR1Q8N123 301 aa13.34□□□□□ -0.27
VAMP7-206ENST00000488344 ANKRD35Q8N283 1001 aa13.34□□□□□ -0.27
VAMP7-206ENST00000488344 SLC17A8Q8NDX2 589 aa13.34□□□□□ -0.27
VAMP7-206ENST00000488344 NUP133Q8WUM0 1156 aa13.34□□□□□ -0.27
VAMP7-206ENST00000488344 SPC25Q9HBM1 224 aa13.34□□□□□ -0.27
VAMP7-206ENST00000488344 SLC38A10Q9HBR0 1119 aa13.34□□□□□ -0.27
VAMP7-206ENST00000488344 ISY1Q9ULR0 285 aaKnown RBP13.34□□□□□ -0.27
VAMP7-206ENST00000488344 STXBP5LQ9Y2K9 1186 aa13.34□□□□□ -0.27
VAMP7-206ENST00000488344 TACC3Q9Y6A5 838 aa13.34□□□□□ -0.27
VAMP7-206ENST00000488344 MYH7P12883 1935 aa13.34□□□□□ -0.27
VAMP7-206ENST00000488344 MYH8P13535 1937 aa13.34□□□□□ -0.27
VAMP7-206ENST00000488344 RLFQ13129 1914 aa13.34□□□□□ -0.27
VAMP7-206ENST00000488344 BAZ2AQ9UIF9 1905 aaKnown RBP13.34□□□□□ -0.27
VAMP7-206ENST00000488344 DNAJC25-GNG10A0A024R161 153 aa13.33□□□□□ -0.28
VAMP7-206ENST00000488344 MOXD2PA6NHM9 499 aa13.33□□□□□ -0.28
VAMP7-206ENST00000488344 ZNF865P0CJ78 1059 aaPredicted RBP13.33□□□□□ -0.28
VAMP7-206ENST00000488344 SLC4A3P48751 1232 aa13.33□□□□□ -0.28
VAMP7-206ENST00000488344 RRP1P56182 461 aaKnown RBP13.33□□□□□ -0.28
VAMP7-206ENST00000488344 TFAP4Q01664 338 aa13.33□□□□□ -0.28
VAMP7-206ENST00000488344 IKQ13123 557 aaPredicted RBP13.33□□□□□ -0.28
VAMP7-206ENST00000488344 TKFCQ3LXA3 575 aa13.33□□□□□ -0.28
VAMP7-206ENST00000488344 SLFN13Q68D06 897 aa13.33□□□□□ -0.28
VAMP7-206ENST00000488344 LRRC47Q8N1G4 583 aaKnown RBP13.33□□□□□ -0.28
VAMP7-206ENST00000488344 FERMT2Q96AC1 680 aa13.33□□□□□ -0.28
VAMP7-206ENST00000488344 EVI5LQ96CN4 794 aa13.33□□□□□ -0.28
VAMP7-206ENST00000488344 GMCL1Q96IK5 515 aa13.33□□□□□ -0.28
VAMP7-206ENST00000488344 PDLIM7Q9NR12 457 aa13.33□□□□□ -0.28
VAMP7-206ENST00000488344 ZHX1Q9UKY1 873 aaPredicted RBP13.33□□□□□ -0.28
VAMP7-206ENST00000488344 PCDHB15Q9Y5E8 787 aa13.33□□□□□ -0.28
VAMP7-206ENST00000488344 FRMPD3Q5JV73 1810 aa13.32□□□□□ -0.28
VAMP7-206ENST00000488344 A0A1W2PQ45 241 aaPredicted RBP13.32□□□□□ -0.28
VAMP7-206ENST00000488344 A0A1W2PQY0 241 aa13.32□□□□□ -0.28
VAMP7-206ENST00000488344 TSPY2A6NKD2 308 aa13.32□□□□□ -0.28
VAMP7-206ENST00000488344 PLA2G6O60733 806 aa13.32□□□□□ -0.28
VAMP7-206ENST00000488344 PGK1P00558 417 aa13.32□□□□□ -0.28
VAMP7-206ENST00000488344 SLC1A4P43007 532 aa13.32□□□□□ -0.28
VAMP7-206ENST00000488344 AAMPQ13685 434 aa13.32□□□□□ -0.28
VAMP7-206ENST00000488344 PCSK9Q8NBP7 692 aaKnown RBP13.32□□□□□ -0.28
VAMP7-206ENST00000488344 ABHD16BQ9H3Z7 469 aa13.32□□□□□ -0.28
VAMP7-206ENST00000488344 ACAD9Q9H845 621 aa13.32□□□□□ -0.28
VAMP7-206ENST00000488344 RAVER2Q9HCJ3 691 aaKnown RBP13.32□□□□□ -0.28
VAMP7-206ENST00000488344 MTMR10Q9NXD2 777 aa13.32□□□□□ -0.28
VAMP7-206ENST00000488344 GREB1LQ9C091 1923 aaPredicted RBP13.31□□□□□ -0.28
VAMP7-206ENST00000488344 DCDC2CA8MYV0 355 aa13.31□□□□□ -0.28
VAMP7-206ENST00000488344 TMEM232C9JQI7 657 aa13.31□□□□□ -0.28
VAMP7-206ENST00000488344 DUSP11O75319 330 aaKnown RBP13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms