RNA–Protein interactions for RNA: ENST00000488010.5

TMF1-203, Transcript of TATA element modulatory factor 1, humanhuman

TSL 5

Gene TMF1, Length 3,399 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMF1-203ENST00000488010 ATP2C1P98194 919 aaPredicted RBP11.24□□□□□ -0.61
TMF1-203ENST00000488010 PDXDC2PQ6P474 469 aa11.24□□□□□ -0.61
TMF1-203ENST00000488010 RASGRP4Q8TDF6 673 aa11.24□□□□□ -0.61
TMF1-203ENST00000488010 SMCR8Q8TEV9 937 aaPredicted RBP11.24□□□□□ -0.61
TMF1-203ENST00000488010 COG1Q8WTW3 980 aa11.24□□□□□ -0.61
TMF1-203ENST00000488010 AGPAT5Q9NUQ2 364 aa11.24□□□□□ -0.61
TMF1-203ENST00000488010 ZNHIT6Q9NWK9 470 aaKnown RBP11.24□□□□□ -0.61
TMF1-203ENST00000488010 TNS3Q68CZ2 1445 aa11.23□□□□□ -0.61
TMF1-203ENST00000488010 KCPQ6ZWJ8 1503 aa11.23□□□□□ -0.61
TMF1-203ENST00000488010 PRPF3O43395 683 aaKnown RBP11.23□□□□□ -0.61
TMF1-203ENST00000488010 PPFIA4O75335 1185 aa11.23□□□□□ -0.61
TMF1-203ENST00000488010 CCT5P48643 541 aa11.23□□□□□ -0.61
TMF1-203ENST00000488010 SEC23AQ15436 765 aa11.23□□□□□ -0.61
TMF1-203ENST00000488010 E2F4Q16254 413 aa11.23□□□□□ -0.61
TMF1-203ENST00000488010 IL17AQ16552 155 aa11.23□□□□□ -0.61
TMF1-203ENST00000488010 SND1Q7KZF4 910 aaKnown RBP eCLIP11.23□□□□□ -0.61
TMF1-203ENST00000488010 IQCA1Q86XH1 822 aa11.23□□□□□ -0.61
TMF1-203ENST00000488010 FAM76AQ8TAV0 307 aa11.23□□□□□ -0.61
TMF1-203ENST00000488010 EHD4Q9H223 541 aa11.23□□□□□ -0.61
TMF1-203ENST00000488010 RMND1Q9NWS8 449 aa11.23□□□□□ -0.61
TMF1-203ENST00000488010 PKD1L3Q7Z443 1732 aa11.23□□□□□ -0.61
TMF1-203ENST00000488010 MROH5Q6ZUA9 1318 aa11.23□□□□□ -0.61
TMF1-203ENST00000488010 CDHR2Q9BYE9 1310 aa11.23□□□□□ -0.61
TMF1-203ENST00000488010 MAGEB6P1A0A0J9YX57 407 aa11.23□□□□□ -0.61
TMF1-203ENST00000488010 GOLGA6CA6NDK9 693 aa11.23□□□□□ -0.61
TMF1-203ENST00000488010 RCCD1A6NED2 376 aa11.23□□□□□ -0.61
TMF1-203ENST00000488010 PDE2AO00408 941 aaPredicted RBP11.23□□□□□ -0.61
TMF1-203ENST00000488010 PSMD14O00487 310 aa11.23□□□□□ -0.61
TMF1-203ENST00000488010 GOLGA6DP0CG33 693 aa11.23□□□□□ -0.61
TMF1-203ENST00000488010 FECHP22830 423 aa11.23□□□□□ -0.61
TMF1-203ENST00000488010 MCM3P25205 808 aa11.23□□□□□ -0.61
TMF1-203ENST00000488010 DYNLL1P63167 89 aaKnown RBP11.23□□□□□ -0.61
TMF1-203ENST00000488010 CKAP4Q07065 602 aaKnown RBP11.23□□□□□ -0.61
TMF1-203ENST00000488010 GOLGA6AQ9NYA3 693 aa11.23□□□□□ -0.61
TMF1-203ENST00000488010 ZBTB1Q9Y2K1 713 aa11.23□□□□□ -0.61
TMF1-203ENST00000488010 GOLGA6BA6NDN3 693 aa11.22□□□□□ -0.61
TMF1-203ENST00000488010 LRRC10BA6NIK2 292 aa11.22□□□□□ -0.61
TMF1-203ENST00000488010 RPS6KA5O75582 802 aa11.22□□□□□ -0.61
TMF1-203ENST00000488010 KRT83P78385 493 aa11.22□□□□□ -0.61
TMF1-203ENST00000488010 CCDC96Q2M329 555 aa11.22□□□□□ -0.61
TMF1-203ENST00000488010 FAM47AQ5JRC9 791 aa11.22□□□□□ -0.61
TMF1-203ENST00000488010 PPM1EQ8WY54 764 aa11.22□□□□□ -0.61
TMF1-203ENST00000488010 PIGBQ92521 554 aa11.22□□□□□ -0.61
TMF1-203ENST00000488010 SPATA31A3Q5VYP0 1347 aa11.22□□□□□ -0.61
TMF1-203ENST00000488010 FGFR2P21802 821 aa11.22□□□□□ -0.61
TMF1-203ENST00000488010 LIG3P49916 1009 aa11.22□□□□□ -0.61
TMF1-203ENST00000488010 CORO7P57737 925 aa11.22□□□□□ -0.61
TMF1-203ENST00000488010 SLC7A5Q01650 507 aa11.22□□□□□ -0.61
TMF1-203ENST00000488010 EVX2Q03828 476 aa11.22□□□□□ -0.61
TMF1-203ENST00000488010 EZH2Q15910 746 aaKnown RBP11.22□□□□□ -0.61
TMF1-203ENST00000488010 CCDC70Q6NSX1 233 aa11.22□□□□□ -0.61
TMF1-203ENST00000488010 WDR59Q6PJI9 974 aa11.22□□□□□ -0.61
TMF1-203ENST00000488010 IRF2BP1Q8IU81 584 aa11.22□□□□□ -0.61
TMF1-203ENST00000488010 KAT14Q9H8E8 782 aa11.22□□□□□ -0.61
TMF1-203ENST00000488010 LGALS16A8MUM7 142 aa11.22□□□□□ -0.61
TMF1-203ENST00000488010 H7C1D1 291 aa11.22□□□□□ -0.61
TMF1-203ENST00000488010 PRPF6O94906 941 aaKnown RBP11.22□□□□□ -0.61
TMF1-203ENST00000488010 ERCC3P19447 782 aa11.22□□□□□ -0.61
TMF1-203ENST00000488010 CYLC1P35663 651 aaPredicted RBP11.22□□□□□ -0.61
TMF1-203ENST00000488010 DNA2P51530 1060 aa11.22□□□□□ -0.61
TMF1-203ENST00000488010 KRT26Q7Z3Y9 468 aa11.22□□□□□ -0.61
TMF1-203ENST00000488010 MSL3Q8N5Y2 521 aaKnown RBP11.22□□□□□ -0.61
TMF1-203ENST00000488010 GPKOWQ92917 476 aaPredicted RBP eCLIP11.22□□□□□ -0.61
TMF1-203ENST00000488010 POLD4Q9HCU8 107 aa11.22□□□□□ -0.61
TMF1-203ENST00000488010 SMARCAL1Q9NZC9 954 aa11.22□□□□□ -0.61
TMF1-203ENST00000488010 JRKLQ9Y4A0 524 aa11.22□□□□□ -0.61
TMF1-203ENST00000488010 CXCR5P32302 372 aa11.21□□□□□ -0.61
TMF1-203ENST00000488010 TBC1D8BQ0IIM8 1120 aa11.21□□□□□ -0.61
TMF1-203ENST00000488010 FUT2Q10981 343 aa11.21□□□□□ -0.61
TMF1-203ENST00000488010 ICE2Q659A1 982 aa11.21□□□□□ -0.61
TMF1-203ENST00000488010 DZIP3Q86Y13 1208 aaKnown RBP11.21□□□□□ -0.61
TMF1-203ENST00000488010 SRBD1Q8N5C6 995 aaKnown RBP11.21□□□□□ -0.61
TMF1-203ENST00000488010 RRP36Q96EU6 259 aaKnown RBP11.21□□□□□ -0.61
TMF1-203ENST00000488010 VIPAS39Q9H9C1 493 aa11.21□□□□□ -0.61
TMF1-203ENST00000488010 NHEJ1Q9H9Q4 299 aaPredicted RBP11.21□□□□□ -0.61
TMF1-203ENST00000488010 MTIF2P46199 727 aaKnown RBP11.21□□□□□ -0.62
TMF1-203ENST00000488010 CSGALNACT2Q8N6G5 542 aa11.21□□□□□ -0.62
TMF1-203ENST00000488010 HDAC7Q8WUI4 952 aa11.21□□□□□ -0.62
TMF1-203ENST00000488010 NID2Q14112 1375 aa11.21□□□□□ -0.62
TMF1-203ENST00000488010 PSMA7O14818 248 aa11.2□□□□□ -0.62
TMF1-203ENST00000488010 GYG1P46976 350 aa11.2□□□□□ -0.62
TMF1-203ENST00000488010 AARSP49588 968 aaKnown RBP eCLIP11.2□□□□□ -0.62
TMF1-203ENST00000488010 PPARDQ03181 441 aa11.2□□□□□ -0.62
TMF1-203ENST00000488010 KIF5AQ12840 1032 aa11.2□□□□□ -0.62
TMF1-203ENST00000488010 NPY5RQ15761 445 aa11.2□□□□□ -0.62
TMF1-203ENST00000488010 EHBP1Q8NDI1 1231 aa11.2□□□□□ -0.62
TMF1-203ENST00000488010 TUBGCP2Q9BSJ2 902 aa11.2□□□□□ -0.62
TMF1-203ENST00000488010 LRWD1Q9UFC0 647 aa11.2□□□□□ -0.62
TMF1-203ENST00000488010 PNPLA7Q6ZV29 1317 aa11.2□□□□□ -0.62
TMF1-203ENST00000488010 PLEKP08567 350 aaPredicted RBP11.2□□□□□ -0.62
TMF1-203ENST00000488010 UBA7P41226 1012 aa11.2□□□□□ -0.62
TMF1-203ENST00000488010 SPA17Q15506 151 aa11.2□□□□□ -0.62
TMF1-203ENST00000488010 CCDC178Q5BJE1 867 aa11.2□□□□□ -0.62
TMF1-203ENST00000488010 CCNI2Q6ZMN8 369 aaPredicted RBP11.2□□□□□ -0.62
TMF1-203ENST00000488010 TMTC3Q6ZXV5 915 aa11.2□□□□□ -0.62
TMF1-203ENST00000488010 DNAJC7Q99615 494 aa11.2□□□□□ -0.62
TMF1-203ENST00000488010 RBM28Q9NW13 759 aaKnown RBP11.2□□□□□ -0.62
TMF1-203ENST00000488010 EHD2Q9NZN4 543 aa11.2□□□□□ -0.62
TMF1-203ENST00000488010 CAPN11Q9UMQ6 739 aa11.2□□□□□ -0.62
TMF1-203ENST00000488010 LRP6O75581 1613 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms