RNA–Protein interactions for RNA: ENST00000487645.1

COL4A6-207, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 3

Gene COL4A6, Length 812 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-207ENST00000487645 TBC1D8O95759 1140 aa15.52■□□□□ 0.08
COL4A6-207ENST00000487645 SMARCA1P28370 1054 aa15.52■□□□□ 0.08
COL4A6-207ENST00000487645 GNAQP50148 359 aa15.52■□□□□ 0.08
COL4A6-207ENST00000487645 IKQ13123 557 aaPredicted RBP15.52■□□□□ 0.08
COL4A6-207ENST00000487645 TTBK2Q6IQ55 1244 aa15.52■□□□□ 0.08
COL4A6-207ENST00000487645 C17orf99Q6UX52 265 aa15.52■□□□□ 0.08
COL4A6-207ENST00000487645 NUP133Q8WUM0 1156 aa15.52■□□□□ 0.08
COL4A6-207ENST00000487645 CHMP4CQ96CF2 233 aa15.52■□□□□ 0.08
COL4A6-207ENST00000487645 LZTS2Q9BRK4 669 aa15.52■□□□□ 0.08
COL4A6-207ENST00000487645 ISY1Q9ULR0 285 aaKnown RBP15.52■□□□□ 0.08
COL4A6-207ENST00000487645 RABGAP1Q9Y3P9 1069 aa15.52■□□□□ 0.08
COL4A6-207ENST00000487645 VWA5AO00534 786 aa15.51■□□□□ 0.07
COL4A6-207ENST00000487645 ZBED4O75132 1171 aa15.51■□□□□ 0.07
COL4A6-207ENST00000487645 GOLGA8HP0CJ92 632 aa15.51■□□□□ 0.07
COL4A6-207ENST00000487645 PDIA3P30101 505 aaKnown RBP15.51■□□□□ 0.07
COL4A6-207ENST00000487645 AK2P54819 239 aa15.51■□□□□ 0.07
COL4A6-207ENST00000487645 RASGRP2Q7LDG7 609 aa15.51■□□□□ 0.07
COL4A6-207ENST00000487645 STAG2Q8N3U4 1231 aa15.51■□□□□ 0.07
COL4A6-207ENST00000487645 KIFC2Q96AC6 838 aa15.51■□□□□ 0.07
COL4A6-207ENST00000487645 RBM28Q9NW13 759 aaKnown RBP15.51■□□□□ 0.07
COL4A6-207ENST00000487645 RBPJLQ9UBG7 517 aa15.51■□□□□ 0.07
COL4A6-207ENST00000487645 MORF4L1Q9UBU8 362 aa15.51■□□□□ 0.07
COL4A6-207ENST00000487645 PRR12Q9ULL5 1215 aa15.51■□□□□ 0.07
COL4A6-207ENST00000487645 CCDC196A0A1B0GTZ2 297 aa15.5■□□□□ 0.07
COL4A6-207ENST00000487645 BCRP11274 1271 aa15.5■□□□□ 0.07
COL4A6-207ENST00000487645 SLC16A2P36021 539 aa15.5■□□□□ 0.07
COL4A6-207ENST00000487645 SYDE2Q5VT97 1194 aa15.5■□□□□ 0.07
COL4A6-207ENST00000487645 POTEEQ6S8J3 1075 aa15.5■□□□□ 0.07
COL4A6-207ENST00000487645 ATG4CQ96DT6 458 aa15.5■□□□□ 0.07
COL4A6-207ENST00000487645 MYL10Q9BUA6 226 aa15.5■□□□□ 0.07
COL4A6-207ENST00000487645 UBA5Q9GZZ9 404 aa15.5■□□□□ 0.07
COL4A6-207ENST00000487645 R3HDMLQ9H3Y0 253 aa15.5■□□□□ 0.07
COL4A6-207ENST00000487645 SLC38A10Q9HBR0 1119 aa15.5■□□□□ 0.07
COL4A6-207ENST00000487645 A0A0G2JMZ2 1700 aa15.5■□□□□ 0.07
COL4A6-207ENST00000487645 MGAMO43451 1857 aa15.5■□□□□ 0.07
COL4A6-207ENST00000487645 SMCHD1A6NHR9 2005 aa15.5■□□□□ 0.07
COL4A6-207ENST00000487645 ZNFX1Q9P2E3 1918 aaKnown RBP15.49■□□□□ 0.07
COL4A6-207ENST00000487645 ST18O60284 1047 aa15.49■□□□□ 0.07
COL4A6-207ENST00000487645 RTN1Q16799 776 aa15.49■□□□□ 0.07
COL4A6-207ENST00000487645 FAM110CQ1W6H9 321 aa15.49■□□□□ 0.07
COL4A6-207ENST00000487645 MICU3Q86XE3 530 aa15.49■□□□□ 0.07
COL4A6-207ENST00000487645 ADGRF4Q8IZF3 695 aa15.49■□□□□ 0.07
COL4A6-207ENST00000487645 ANKRD13CQ8N6S4 541 aa15.49■□□□□ 0.07
COL4A6-207ENST00000487645 GPRC5AQ8NFJ5 357 aa15.49■□□□□ 0.07
COL4A6-207ENST00000487645 RIOX1Q9H6W3 641 aa15.49■□□□□ 0.07
COL4A6-207ENST00000487645 CPA4Q9UI42 421 aa15.49■□□□□ 0.07
COL4A6-207ENST00000487645 NAP1L2Q9ULW6 460 aaPredicted RBP15.49■□□□□ 0.07
COL4A6-207ENST00000487645 HPS5Q9UPZ3 1129 aa15.49■□□□□ 0.07
COL4A6-207ENST00000487645 DOCK3Q8IZD9 2030 aa15.49■□□□□ 0.07
COL4A6-207ENST00000487645 NID2Q14112 1375 aa15.49■□□□□ 0.07
COL4A6-207ENST00000487645 GOLGA8AA7E2F4 631 aa15.48■□□□□ 0.07
COL4A6-207ENST00000487645 GOLGA8BA8MQT2 603 aa15.48■□□□□ 0.07
COL4A6-207ENST00000487645 GPR25O00155 361 aa15.48■□□□□ 0.07
COL4A6-207ENST00000487645 ATP2A1O14983 1001 aa15.48■□□□□ 0.07
COL4A6-207ENST00000487645 CNMDO75829 334 aa15.48■□□□□ 0.07
COL4A6-207ENST00000487645 RXRAP19793 462 aa15.48■□□□□ 0.07
COL4A6-207ENST00000487645 METAP2P50579 478 aaKnown RBP eCLIP15.48■□□□□ 0.07
COL4A6-207ENST00000487645 OAZ1P54368 228 aa15.48■□□□□ 0.07
COL4A6-207ENST00000487645 ERVK-9P63128 1117 aa15.48■□□□□ 0.07
COL4A6-207ENST00000487645 ERVK-24P63145 666 aa15.48■□□□□ 0.07
COL4A6-207ENST00000487645 SAMD1Q6SPF0 538 aaPredicted RBP15.48■□□□□ 0.07
COL4A6-207ENST00000487645 CCDC144CPQ8IYA2 1237 aa15.48■□□□□ 0.07
COL4A6-207ENST00000487645 REPS2Q8NFH8 660 aa15.48■□□□□ 0.07
COL4A6-207ENST00000487645 SPZ1Q9BXG8 430 aa15.48■□□□□ 0.07
COL4A6-207ENST00000487645 RANBP17Q9H2T7 1088 aaKnown RBP15.48■□□□□ 0.07
COL4A6-207ENST00000487645 TXNRD2Q9NNW7 524 aa15.48■□□□□ 0.07
COL4A6-207ENST00000487645 FAM217BQ9NTX9 383 aaPredicted RBP15.48■□□□□ 0.07
COL4A6-207ENST00000487645 BTBD7Q9P203 1132 aa15.48■□□□□ 0.07
COL4A6-207ENST00000487645 PNMA2Q9UL42 364 aa15.48■□□□□ 0.07
COL4A6-207ENST00000487645 TPCN1Q9ULQ1 816 aa15.48■□□□□ 0.07
COL4A6-207ENST00000487645 LIMCH1Q9UPQ0 1083 aa15.48■□□□□ 0.07
COL4A6-207ENST00000487645 CTDP1Q9Y5B0 961 aaPredicted RBP15.48■□□□□ 0.07
COL4A6-207ENST00000487645 HSPA1AP0DMV8 641 aaKnown RBP15.47■□□□□ 0.07
COL4A6-207ENST00000487645 HSPA1BP0DMV9 641 aaKnown RBP15.47■□□□□ 0.07
COL4A6-207ENST00000487645 MCM2P49736 904 aa15.47■□□□□ 0.07
COL4A6-207ENST00000487645 CCNA1P78396 465 aa15.47■□□□□ 0.07
COL4A6-207ENST00000487645 SP3Q02447 781 aa15.47■□□□□ 0.07
COL4A6-207ENST00000487645 TMEM132BQ14DG7 1078 aa15.47■□□□□ 0.07
COL4A6-207ENST00000487645 Q3C1V9 767 aa15.47■□□□□ 0.07
COL4A6-207ENST00000487645 SRBD1Q8N5C6 995 aaKnown RBP15.47■□□□□ 0.07
COL4A6-207ENST00000487645 MTMR8Q96EF0 704 aa15.47■□□□□ 0.07
COL4A6-207ENST00000487645 ZSCAN31Q96LW9 406 aaPredicted RBP15.47■□□□□ 0.07
COL4A6-207ENST00000487645 LARP6Q9BRS8 491 aaKnown RBP15.47■□□□□ 0.07
COL4A6-207ENST00000487645 PAGR1Q9BTK6 254 aa15.47■□□□□ 0.07
COL4A6-207ENST00000487645 JMJD4Q9H9V9 463 aa15.47■□□□□ 0.07
COL4A6-207ENST00000487645 ZNF214Q9UL59 606 aaPredicted RBP15.47■□□□□ 0.07
COL4A6-207ENST00000487645 CASP8AP2Q9UKL3 1982 aa15.47■□□□□ 0.07
COL4A6-207ENST00000487645 FOXN1O15353 648 aa15.46■□□□□ 0.07
COL4A6-207ENST00000487645 CYTH3O43739 400 aa15.46■□□□□ 0.07
COL4A6-207ENST00000487645 PFKFB2O60825 505 aa15.46■□□□□ 0.07
COL4A6-207ENST00000487645 SLC25A27O95847 323 aa15.46■□□□□ 0.07
COL4A6-207ENST00000487645 CDC27P30260 824 aa15.46■□□□□ 0.07
COL4A6-207ENST00000487645 ADD1P35611 737 aaKnown RBP15.46■□□□□ 0.07
COL4A6-207ENST00000487645 STAT3P40763 770 aa15.46■□□□□ 0.07
COL4A6-207ENST00000487645 CTCFP49711 727 aaPredicted RBP15.46■□□□□ 0.07
COL4A6-207ENST00000487645 TMTC3Q6ZXV5 915 aa15.46■□□□□ 0.07
COL4A6-207ENST00000487645 NBPF11Q86T75 865 aa15.46■□□□□ 0.07
COL4A6-207ENST00000487645 RAB11FIP4Q86YS3 637 aa15.46■□□□□ 0.07
COL4A6-207ENST00000487645 SPATC1LQ9H0A9 340 aa15.46■□□□□ 0.07
COL4A6-207ENST00000487645 SLKQ9H2G2 1235 aaPredicted RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms