RNA–Protein interactions for RNA: ENST00000487633.1

COL4A3-206, Transcript of collagen type IV alpha 3 chain, humanhuman

TSL 3

Gene COL4A3, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-206ENST00000487633 HIPK3Q9H422 1215 aa7.28□□□□□ -1.24
COL4A3-206ENST00000487633 SUGCTQ9HAC7 445 aa7.28□□□□□ -1.24
COL4A3-206ENST00000487633 HMG20BQ9P0W2 317 aa7.28□□□□□ -1.24
COL4A3-206ENST00000487633 RALYQ9UKM9 306 aaKnown RBP7.28□□□□□ -1.24
COL4A3-206ENST00000487633 MTUS1Q9ULD2 1270 aa7.28□□□□□ -1.24
COL4A3-206ENST00000487633 FAM186AA6NE01 2351 aa7.27□□□□□ -1.24
COL4A3-206ENST00000487633 BAHCC1Q9P281 2608 aa7.27□□□□□ -1.25
COL4A3-206ENST00000487633 C19orf67A6NJJ6 358 aa7.27□□□□□ -1.25
COL4A3-206ENST00000487633 STRNO43815 780 aa7.27□□□□□ -1.25
COL4A3-206ENST00000487633 C6orf222P0C671 652 aaPredicted RBP7.27□□□□□ -1.25
COL4A3-206ENST00000487633 CCDC184Q52MB2 194 aa7.27□□□□□ -1.25
COL4A3-206ENST00000487633 TATDN1Q6P1N9 297 aa7.27□□□□□ -1.25
COL4A3-206ENST00000487633 CXCL17Q6UXB2 119 aa7.27□□□□□ -1.25
COL4A3-206ENST00000487633 ERICH6Q7L0X2 663 aa7.27□□□□□ -1.25
COL4A3-206ENST00000487633 WWC1Q8IX03 1113 aa7.27□□□□□ -1.25
COL4A3-206ENST00000487633 SLC43A3Q8NBI5 491 aa7.27□□□□□ -1.25
COL4A3-206ENST00000487633 NUP133Q8WUM0 1156 aa7.27□□□□□ -1.25
COL4A3-206ENST00000487633 VTI1AQ96AJ9 217 aa7.27□□□□□ -1.25
COL4A3-206ENST00000487633 FEZ1Q99689 392 aa7.27□□□□□ -1.25
COL4A3-206ENST00000487633 KIAA1683Q9H0B3 1180 aa7.27□□□□□ -1.25
COL4A3-206ENST00000487633 RIF1Q5UIP0 2472 aaKnown RBP7.27□□□□□ -1.25
COL4A3-206ENST00000487633 LCTP09848 1927 aa7.27□□□□□ -1.25
COL4A3-206ENST00000487633 ELP1O95163 1332 aa7.27□□□□□ -1.25
COL4A3-206ENST00000487633 NLRC5Q86WI3 1866 aa7.26□□□□□ -1.25
COL4A3-206ENST00000487633 A0A0U1RQG5 324 aaPredicted RBP7.26□□□□□ -1.25
COL4A3-206ENST00000487633 MOXD2PA6NHM9 499 aa7.26□□□□□ -1.25
COL4A3-206ENST00000487633 CYP2C9P11712 490 aa7.26□□□□□ -1.25
COL4A3-206ENST00000487633 CST5P28325 142 aaPredicted RBP7.26□□□□□ -1.25
COL4A3-206ENST00000487633 DSG3P32926 999 aa7.26□□□□□ -1.25
COL4A3-206ENST00000487633 FOXK2Q01167 660 aa7.26□□□□□ -1.25
COL4A3-206ENST00000487633 CALD1Q05682 793 aaKnown RBP7.26□□□□□ -1.25
COL4A3-206ENST00000487633 SEPT2Q15019 361 aa7.26□□□□□ -1.25
COL4A3-206ENST00000487633 RALBP1Q15311 655 aa7.26□□□□□ -1.25
COL4A3-206ENST00000487633 SIAH1Q8IUQ4 282 aa7.26□□□□□ -1.25
COL4A3-206ENST00000487633 SHCBP1Q8NEM2 672 aa7.26□□□□□ -1.25
COL4A3-206ENST00000487633 NEK9Q8TD19 979 aa7.26□□□□□ -1.25
COL4A3-206ENST00000487633 GLT1D1Q96MS3 346 aa7.26□□□□□ -1.25
COL4A3-206ENST00000487633 FBXO28Q9NVF7 368 aa7.26□□□□□ -1.25
COL4A3-206ENST00000487633 ZHX1Q9UKY1 873 aaPredicted RBP7.26□□□□□ -1.25
COL4A3-206ENST00000487633 RIPK3Q9Y572 518 aa7.26□□□□□ -1.25
COL4A3-206ENST00000487633 MYH8P13535 1937 aa7.25□□□□□ -1.25
COL4A3-206ENST00000487633 H0Y858 1186 aa7.25□□□□□ -1.25
COL4A3-206ENST00000487633 SEMA3EO15041 775 aa7.25□□□□□ -1.25
COL4A3-206ENST00000487633 SHMT1P34896 483 aa7.25□□□□□ -1.25
COL4A3-206ENST00000487633 MCAMP43121 646 aa7.25□□□□□ -1.25
COL4A3-206ENST00000487633 DEFB103AP81534 67 aa7.25□□□□□ -1.25
COL4A3-206ENST00000487633 DLX2Q07687 328 aaPredicted RBP7.25□□□□□ -1.25
COL4A3-206ENST00000487633 COG2Q14746 738 aa7.25□□□□□ -1.25
COL4A3-206ENST00000487633 GPNMBQ14956 572 aa7.25□□□□□ -1.25
COL4A3-206ENST00000487633 CCDC174Q6PII3 467 aa7.25□□□□□ -1.25
COL4A3-206ENST00000487633 FOXP4Q8IVH2 680 aaPredicted RBP7.25□□□□□ -1.25
COL4A3-206ENST00000487633 HERC6Q8IVU3 1022 aa7.25□□□□□ -1.25
COL4A3-206ENST00000487633 SPICE1Q8N0Z3 855 aa7.25□□□□□ -1.25
COL4A3-206ENST00000487633 CRACR2BQ8N4Y2 399 aaPredicted RBP7.25□□□□□ -1.25
COL4A3-206ENST00000487633 XAGE2Q96GT9 111 aa7.25□□□□□ -1.25
COL4A3-206ENST00000487633 CNTNAP3BQ96NU0 1288 aa7.25□□□□□ -1.25
COL4A3-206ENST00000487633 MMP19Q99542 508 aa7.25□□□□□ -1.25
COL4A3-206ENST00000487633 CNTNAP3Q9BZ76 1288 aa7.25□□□□□ -1.25
COL4A3-206ENST00000487633 KATNBL1Q9H079 304 aa7.25□□□□□ -1.25
COL4A3-206ENST00000487633 UPF3AQ9H1J1 476 aaKnown RBP7.25□□□□□ -1.25
COL4A3-206ENST00000487633 TLR9Q9NR96 1032 aa7.25□□□□□ -1.25
COL4A3-206ENST00000487633 TRMT13Q9NUP7 481 aaKnown RBP7.25□□□□□ -1.25
COL4A3-206ENST00000487633 GNL3LQ9NVN8 582 aaKnown RBP7.25□□□□□ -1.25
COL4A3-206ENST00000487633 RAI14Q9P0K7 980 aa7.25□□□□□ -1.25
COL4A3-206ENST00000487633 EPG5Q9HCE0 2579 aa7.25□□□□□ -1.25
COL4A3-206ENST00000487633 MROH7Q68CQ1 1323 aa7.25□□□□□ -1.25
COL4A3-206ENST00000487633 A0A1B0GUL7 405 aa7.24□□□□□ -1.25
COL4A3-206ENST00000487633 DUSP11O75319 330 aaKnown RBP7.24□□□□□ -1.25
COL4A3-206ENST00000487633 PDGFBP01127 241 aaPredicted RBP7.24□□□□□ -1.25
COL4A3-206ENST00000487633 FCER1AP12319 257 aa7.24□□□□□ -1.25
COL4A3-206ENST00000487633 LTBRP36941 435 aa7.24□□□□□ -1.25
COL4A3-206ENST00000487633 PLCD1P51178 756 aa7.24□□□□□ -1.25
COL4A3-206ENST00000487633 PTPN5P54829 565 aa7.24□□□□□ -1.25
COL4A3-206ENST00000487633 GJA9P57773 515 aa7.24□□□□□ -1.25
COL4A3-206ENST00000487633 CLUL1Q15846 466 aa7.24□□□□□ -1.25
COL4A3-206ENST00000487633 CCDC144BQ3MJ40 725 aa7.24□□□□□ -1.25
COL4A3-206ENST00000487633 GNASQ5JWF2 1037 aa7.24□□□□□ -1.25
COL4A3-206ENST00000487633 ABRAQ8N0Z2 381 aa7.24□□□□□ -1.25
COL4A3-206ENST00000487633 ZGPATQ8N5A5 531 aaKnown RBP7.24□□□□□ -1.25
COL4A3-206ENST00000487633 REPS2Q8NFH8 660 aa7.24□□□□□ -1.25
COL4A3-206ENST00000487633 TANGO6Q9C0B7 1094 aa7.24□□□□□ -1.25
COL4A3-206ENST00000487633 DHX36Q9H2U1 1008 aaKnown RBP7.24□□□□□ -1.25
COL4A3-206ENST00000487633 SNRKQ9NRH2 765 aa7.24□□□□□ -1.25
COL4A3-206ENST00000487633 CEP126Q9P2H0 1117 aa7.24□□□□□ -1.25
COL4A3-206ENST00000487633 SALL2Q9Y467 1007 aaPredicted RBP7.24□□□□□ -1.25
COL4A3-206ENST00000487633 ZNF536O15090 1300 aa7.24□□□□□ -1.25
COL4A3-206ENST00000487633 PDS5AQ29RF7 1337 aaKnown RBP7.24□□□□□ -1.25
COL4A3-206ENST00000487633 NCOR2Q9Y618 2525 aa7.23□□□□□ -1.25
COL4A3-206ENST00000487633 ZBTB22O15209 634 aa7.23□□□□□ -1.25
COL4A3-206ENST00000487633 TLR3O15455 904 aaKnown RBP7.23□□□□□ -1.25
COL4A3-206ENST00000487633 TFCP2Q12800 502 aa7.23□□□□□ -1.25
COL4A3-206ENST00000487633 ITGA7Q13683 1181 aa7.23□□□□□ -1.25
COL4A3-206ENST00000487633 ABCB5Q2M3G0 1257 aa7.23□□□□□ -1.25
COL4A3-206ENST00000487633 RNF135Q8IUD6 432 aa7.23□□□□□ -1.25
COL4A3-206ENST00000487633 SLF2Q8IX21 1173 aa7.23□□□□□ -1.25
COL4A3-206ENST00000487633 SPATA5Q8NB90 893 aa7.23□□□□□ -1.25
COL4A3-206ENST00000487633 MFSD14AQ96MC6 490 aa7.23□□□□□ -1.25
COL4A3-206ENST00000487633 C17orf80Q9BSJ5 609 aa7.23□□□□□ -1.25
COL4A3-206ENST00000487633 CHMP4AQ9BY43 222 aa7.23□□□□□ -1.25
COL4A3-206ENST00000487633 MTIF3Q9H2K0 278 aaKnown RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms