RNA–Protein interactions for RNA: ENST00000487147.5

COL6A4P1-202, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

BASIC

Gene COL6A4P1, Length 4,317 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-202ENST00000487147 YY1AP1Q9H869 796 aa8.52□□□□□ -1.05
COL6A4P1-202ENST00000487147 GEMIN8Q9NWZ8 242 aaKnown RBP8.52□□□□□ -1.05
COL6A4P1-202ENST00000487147 ADD3Q9UEY8 706 aaKnown RBP8.52□□□□□ -1.05
COL6A4P1-202ENST00000487147 KIDINS220Q9ULH0 1771 aa8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 PIK3C2BO00750 1634 aa8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 LRRIQ3A6PVS8 624 aaPredicted RBP8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 MAP2K7O14733 419 aa8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 CHUKO15111 745 aa8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 CTNNA1P35221 906 aaKnown RBP8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 ADD2P35612 726 aa8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 SF3A3Q12874 501 aaKnown RBP eCLIP8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 SNCBQ16143 134 aa8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 ZNF658Q5TYW1 1059 aaPredicted RBP8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 CYB5R4Q7L1T6 521 aa8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 ZNF444Q8N0Y2 327 aaPredicted RBP8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 TEX13AQ9BXU3 409 aaPredicted RBP8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 NHEJ1Q9H9Q4 299 aaPredicted RBP8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 VAT1LQ9HCJ6 419 aa8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 EPB41L5Q9HCM4 733 aa8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 LRWD1Q9UFC0 647 aa8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 SWAP70Q9UH65 585 aa8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 HPCAL4Q9UM19 191 aa8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 STX8Q9UNK0 236 aa8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 PALLDQ8WX93 1383 aa8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 KNDC1Q76NI1 1749 aa8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 IRAK1P51617 712 aa8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 KRT71Q3SY84 523 aa8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 CNNM4Q6P4Q7 775 aa8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 PACS2Q86VP3 889 aa8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 TBC1D10CQ8IV04 446 aa8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 CCDC170Q8IYT3 715 aa8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 CHP1Q99653 195 aa8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 TAOK3Q9H2K8 898 aa8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 HPSEQ9Y251 543 aa8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 UBN2Q6ZU65 1347 aa8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 TTC26A0AVF1 554 aa8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 TARSL2A2RTX5 802 aaKnown RBP8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 CEP104O60308 925 aa8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 HEXIM1O94992 359 aaKnown RBP8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 VIMP08670 466 aaKnown RBP8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 NR1D1P20393 614 aa8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 ZFYVE27Q5T4F4 411 aa8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 FMNL3Q8IVF7 1028 aa8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 CRACR2BQ8N4Y2 399 aaPredicted RBP8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 KIFC2Q96AC6 838 aa8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 IQCDQ96DY2 449 aa8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 RNF26Q9BY78 433 aaPredicted RBP8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 LRRC27Q9C0I9 530 aa8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 UBA5Q9GZZ9 404 aa8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 CXorf56Q9H5V9 222 aa8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 NLRC4Q9NPP4 1024 aa8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 RAB21Q9UL25 225 aa8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 TNKSO95271 1327 aa8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 WDR19Q8NEZ3 1342 aa8.51□□□□□ -1.05
COL6A4P1-202ENST00000487147 PHKG2P15735 406 aa8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 GNAQP50148 359 aa8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 ZBED6P86452 979 aa8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 E2F5Q15329 346 aa8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 PUM3Q15397 648 aaKnown RBP8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 GKAP1Q5VSY0 366 aaPredicted RBP8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 PIAS4Q8N2W9 510 aaPredicted RBP8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 MB21D1Q8N884 522 aa8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 RETREG2Q8NC44 543 aa8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 CCDC26Q8TAB7 109 aa8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 STIM2Q9P246 746 aa8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 SETD1BQ9UPS6 1966 aaKnown RBP8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 ANO9A1A5B4 782 aa8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 KIF4AO95239 1232 aa8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 GYPCP04921 128 aa8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 SF3B2Q13435 895 aaKnown RBP8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 SPATA5Q8NB90 893 aa8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 LMBR1Q8WVP7 490 aa8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 N4BP2L2Q92802 583 aaPredicted RBP8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 AGXT2Q9BYV1 514 aa8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 FBXO2Q9UK22 296 aaPredicted RBP8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 TRAF5O00463 557 aa8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 SLC8A1P32418 973 aa8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 SARNPP82979 210 aaKnown RBP8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 RPS6KA1Q15418 735 aa8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 PPP1R7Q15435 360 aa8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 ZRSR2Q15696 482 aaKnown RBP8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 LETM2Q2VYF4 491 aa8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 WDR93Q6P2C0 686 aa8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 ZCRB1Q8TBF4 217 aaKnown RBP8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 PPIL4Q8WUA2 492 aaKnown RBP eCLIP8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 CNOT6LQ96LI5 555 aaKnown RBP8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 TRIM10Q9UDY6 481 aa8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 HPS5Q9UPZ3 1129 aa8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 GDAQ9Y2T3 454 aa8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 PLEKHG2Q9H7P9 1386 aa8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 ANKARQ7Z5J8 1434 aa8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 PPP1R12BO60237 982 aaPredicted RBP8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 MOCS3O95396 460 aa8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 NAPAP54920 295 aa8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 PTPAQ15257 358 aa8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 CCNI2Q6ZMN8 369 aaPredicted RBP8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 USP49Q70CQ1 688 aa8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 SV2BQ7L1I2 683 aa8.5□□□□□ -1.05
COL6A4P1-202ENST00000487147 LPIN2Q92539 896 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms