RNA–Protein interactions for RNA: ENST00000487118.1

NUDCD3-209, Transcript of NudC domain containing 3, humanhuman

TSL 3

Gene NUDCD3, Length 314 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-209ENST00000487118 GALNT17Q6IS24 598 aa9.9□□□□□ -0.82
NUDCD3-209ENST00000487118 MIGA2Q7L4E1 593 aa9.9□□□□□ -0.82
NUDCD3-209ENST00000487118 ZNF713Q8N859 430 aaPredicted RBP9.9□□□□□ -0.82
NUDCD3-209ENST00000487118 DAGLBQ8NCG7 672 aa9.9□□□□□ -0.82
NUDCD3-209ENST00000487118 OXER1Q8TDS5 423 aa9.9□□□□□ -0.82
NUDCD3-209ENST00000487118 TNFRSF25Q93038 417 aa9.9□□□□□ -0.82
NUDCD3-209ENST00000487118 HOOK2Q96ED9 719 aa9.9□□□□□ -0.82
NUDCD3-209ENST00000487118 MTMR8Q96EF0 704 aa9.9□□□□□ -0.82
NUDCD3-209ENST00000487118 RRP36Q96EU6 259 aaKnown RBP9.9□□□□□ -0.82
NUDCD3-209ENST00000487118 L3MBTL3Q96JM7 780 aaPredicted RBP9.9□□□□□ -0.82
NUDCD3-209ENST00000487118 FTOQ9C0B1 505 aaKnown RBP eCLIP9.9□□□□□ -0.82
NUDCD3-209ENST00000487118 CPVLQ9H3G5 476 aa9.9□□□□□ -0.82
NUDCD3-209ENST00000487118 ARHGEF10LQ9HCE6 1279 aa9.9□□□□□ -0.82
NUDCD3-209ENST00000487118 BARHL2Q9NY43 387 aa9.9□□□□□ -0.82
NUDCD3-209ENST00000487118 CLEC11AQ9Y240 323 aa9.9□□□□□ -0.82
NUDCD3-209ENST00000487118 TMX2Q9Y320 296 aa9.9□□□□□ -0.82
NUDCD3-209ENST00000487118 F5H6K3 240 aa9.89□□□□□ -0.83
NUDCD3-209ENST00000487118 NDUFB10O96000 172 aa9.89□□□□□ -0.83
NUDCD3-209ENST00000487118 ASNSP08243 561 aa9.89□□□□□ -0.83
NUDCD3-209ENST00000487118 LMOD1P29536 600 aaPredicted RBP9.89□□□□□ -0.83
NUDCD3-209ENST00000487118 FXR1P51114 621 aaKnown RBP eCLIP9.89□□□□□ -0.83
NUDCD3-209ENST00000487118 NLRP5P59047 1200 aa9.89□□□□□ -0.83
NUDCD3-209ENST00000487118 KLRC3Q07444 240 aa9.89□□□□□ -0.83
NUDCD3-209ENST00000487118 NR5A1Q13285 461 aa9.89□□□□□ -0.83
NUDCD3-209ENST00000487118 GNL2Q13823 731 aaKnown RBP9.89□□□□□ -0.83
NUDCD3-209ENST00000487118 CCDC96Q2M329 555 aa9.89□□□□□ -0.83
NUDCD3-209ENST00000487118 DEFB115Q30KQ5 88 aa9.89□□□□□ -0.83
NUDCD3-209ENST00000487118 ANO1Q5XXA6 986 aa9.89□□□□□ -0.83
NUDCD3-209ENST00000487118 DCAF15Q66K64 600 aa9.89□□□□□ -0.83
NUDCD3-209ENST00000487118 TYW1BQ6NUM6 668 aa9.89□□□□□ -0.83
NUDCD3-209ENST00000487118 LINC00301Q8NCQ3 95 aa9.89□□□□□ -0.83
NUDCD3-209ENST00000487118 CCDC148Q8NFR7 591 aa9.89□□□□□ -0.83
NUDCD3-209ENST00000487118 PGBD1Q96JS3 809 aa9.89□□□□□ -0.83
NUDCD3-209ENST00000487118 UBA5Q9GZZ9 404 aa9.89□□□□□ -0.83
NUDCD3-209ENST00000487118 TAF1DQ9H5J8 278 aaPredicted RBP9.89□□□□□ -0.83
NUDCD3-209ENST00000487118 JMJD4Q9H9V9 463 aa9.89□□□□□ -0.83
NUDCD3-209ENST00000487118 BRMS1Q9HCU9 246 aa9.89□□□□□ -0.83
NUDCD3-209ENST00000487118 GPCPD1Q9NPB8 672 aa9.89□□□□□ -0.83
NUDCD3-209ENST00000487118 GGA3Q9NZ52 723 aa9.89□□□□□ -0.83
NUDCD3-209ENST00000487118 ZNF112Q9UJU3 913 aa9.89□□□□□ -0.83
NUDCD3-209ENST00000487118 CLIC4Q9Y696 253 aa9.89□□□□□ -0.83
NUDCD3-209ENST00000487118 MORC2Q9Y6X9 1032 aaPredicted RBP9.89□□□□□ -0.83
NUDCD3-209ENST00000487118 ATAD5Q96QE3 1844 aa9.89□□□□□ -0.83
NUDCD3-209ENST00000487118 ESYT2A0FGR8 921 aa9.88□□□□□ -0.83
NUDCD3-209ENST00000487118 TMEM88BA6NKF7 163 aa9.88□□□□□ -0.83
NUDCD3-209ENST00000487118 M0R2N6 131 aa9.88□□□□□ -0.83
NUDCD3-209ENST00000487118 CTNND1O60716 968 aaKnown RBP9.88□□□□□ -0.83
NUDCD3-209ENST00000487118 SLC1A4P43007 532 aa9.88□□□□□ -0.83
NUDCD3-209ENST00000487118 TOB1P50616 345 aaPredicted RBP9.88□□□□□ -0.83
NUDCD3-209ENST00000487118 PTPAQ15257 358 aa9.88□□□□□ -0.83
NUDCD3-209ENST00000487118 RILPL1Q5EBL4 403 aa9.88□□□□□ -0.83
NUDCD3-209ENST00000487118 NBPF12Q5TAG4 269 aaPredicted RBP9.88□□□□□ -0.83
NUDCD3-209ENST00000487118 MAP1SQ66K74 1059 aaPredicted RBP9.88□□□□□ -0.83
NUDCD3-209ENST00000487118 TTBK2Q6IQ55 1244 aa9.88□□□□□ -0.83
NUDCD3-209ENST00000487118 PPP1R18Q6NYC8 613 aa9.88□□□□□ -0.83
NUDCD3-209ENST00000487118 BTNL9Q6UXG8 535 aa9.88□□□□□ -0.83
NUDCD3-209ENST00000487118 KCTD1Q719H9 257 aa9.88□□□□□ -0.83
NUDCD3-209ENST00000487118 HEATR3Q7Z4Q2 680 aa9.88□□□□□ -0.83
NUDCD3-209ENST00000487118 ADGRF4Q8IZF3 695 aa9.88□□□□□ -0.83
NUDCD3-209ENST00000487118 KCNG4Q8TDN1 519 aa9.88□□□□□ -0.83
NUDCD3-209ENST00000487118 ACER1Q8TDN7 264 aa9.88□□□□□ -0.83
NUDCD3-209ENST00000487118 CCDC12Q8WUD4 166 aaPredicted RBP9.88□□□□□ -0.83
NUDCD3-209ENST00000487118 PIBF1Q8WXW3 757 aa9.88□□□□□ -0.83
NUDCD3-209ENST00000487118 GPKOWQ92917 476 aaPredicted RBP eCLIP9.88□□□□□ -0.83
NUDCD3-209ENST00000487118 PIGSQ96S52 555 aa9.88□□□□□ -0.83
NUDCD3-209ENST00000487118 ZNF341Q9BYN7 854 aa9.88□□□□□ -0.83
NUDCD3-209ENST00000487118 ZMYND12Q9H0C1 365 aa9.88□□□□□ -0.83
NUDCD3-209ENST00000487118 SH2D4AQ9H788 454 aa9.88□□□□□ -0.83
NUDCD3-209ENST00000487118 TMEM63CQ9P1W3 806 aa9.88□□□□□ -0.83
NUDCD3-209ENST00000487118 SEC63Q9UGP8 760 aaKnown RBP9.88□□□□□ -0.83
NUDCD3-209ENST00000487118 PCDHA4Q9UN74 947 aa9.88□□□□□ -0.83
NUDCD3-209ENST00000487118 SCAF8Q9UPN6 1271 aaKnown RBP9.88□□□□□ -0.83
NUDCD3-209ENST00000487118 POLR2AP24928 1970 aaKnown RBP9.88□□□□□ -0.83
NUDCD3-209ENST00000487118 SSC5DA1L4H1 1573 aa9.88□□□□□ -0.83
NUDCD3-209ENST00000487118 DOCK1Q14185 1865 aa9.87□□□□□ -0.83
NUDCD3-209ENST00000487118 PNMA6FA0A0J9YX94 578 aa9.87□□□□□ -0.83
NUDCD3-209ENST00000487118 PPP6R2O75170 966 aa9.87□□□□□ -0.83
NUDCD3-209ENST00000487118 BMP3P12645 472 aa9.87□□□□□ -0.83
NUDCD3-209ENST00000487118 ECE1P42892 770 aa9.87□□□□□ -0.83
NUDCD3-209ENST00000487118 CEBPZQ03701 1054 aaKnown RBP9.87□□□□□ -0.83
NUDCD3-209ENST00000487118 GSE1Q14687 1217 aa9.87□□□□□ -0.83
NUDCD3-209ENST00000487118 SLC39A14Q15043 492 aa9.87□□□□□ -0.83
NUDCD3-209ENST00000487118 STK38Q15208 465 aa9.87□□□□□ -0.83
NUDCD3-209ENST00000487118 EARS2Q5JPH6 523 aaKnown RBP9.87□□□□□ -0.83
NUDCD3-209ENST00000487118 CAVIN1Q6NZI2 390 aaKnown RBP9.87□□□□□ -0.83
NUDCD3-209ENST00000487118 HOMER1Q86YM7 354 aa9.87□□□□□ -0.83
NUDCD3-209ENST00000487118 BLIDQ8IZY5 108 aa9.87□□□□□ -0.83
NUDCD3-209ENST00000487118 SYAP1Q96A49 352 aaPredicted RBP9.87□□□□□ -0.83
NUDCD3-209ENST00000487118 VCPKMTQ9H867 229 aa9.87□□□□□ -0.83
NUDCD3-209ENST00000487118 VAT1LQ9HCJ6 419 aa9.87□□□□□ -0.83
NUDCD3-209ENST00000487118 GOPCQ9HD26 462 aa9.87□□□□□ -0.83
NUDCD3-209ENST00000487118 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.87□□□□□ -0.83
NUDCD3-209ENST00000487118 A0A1W2PQ27 194 aa9.86□□□□□ -0.83
NUDCD3-209ENST00000487118 A0A1W2PQ64 194 aa9.86□□□□□ -0.83
NUDCD3-209ENST00000487118 A0A1W2PQD8 194 aa9.86□□□□□ -0.83
NUDCD3-209ENST00000487118 FAM205CA6NFA0 338 aa9.86□□□□□ -0.83
NUDCD3-209ENST00000487118 USP17L10C9JJH3 530 aa9.86□□□□□ -0.83
NUDCD3-209ENST00000487118 ZBTB5O15062 677 aa9.86□□□□□ -0.83
NUDCD3-209ENST00000487118 ADAMTS3O15072 1205 aa9.86□□□□□ -0.83
NUDCD3-209ENST00000487118 SPTLC2O15270 562 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms