RNA–Protein interactions for RNA: ENST00000487068.1

NEK4-204, Transcript of NIMA related kinase 4, humanhuman

TSL 2

Gene NEK4, Length 631 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK4-204ENST00000487068 TOP1P11387 765 aaKnown RBP12.01□□□□□ -0.49
NEK4-204ENST00000487068 CYP2B6P20813 491 aa12.01□□□□□ -0.49
NEK4-204ENST00000487068 UBXN2AP68543 259 aa12.01□□□□□ -0.49
NEK4-204ENST00000487068 KCTD1Q719H9 257 aa12.01□□□□□ -0.49
NEK4-204ENST00000487068 RASGRP2Q7LDG7 609 aa12.01□□□□□ -0.49
NEK4-204ENST00000487068 MKL1Q969V6 931 aa12.01□□□□□ -0.49
NEK4-204ENST00000487068 KAT14Q9H8E8 782 aa12.01□□□□□ -0.49
NEK4-204ENST00000487068 FEM1BQ9UK73 627 aa12.01□□□□□ -0.49
NEK4-204ENST00000487068 FRMPD2Q68DX3 1309 aaPredicted RBP12.01□□□□□ -0.49
NEK4-204ENST00000487068 ERICH2A1L162 156 aa12□□□□□ -0.49
NEK4-204ENST00000487068 H0YGN5 161 aa12□□□□□ -0.49
NEK4-204ENST00000487068 VWA5AO00534 786 aa12□□□□□ -0.49
NEK4-204ENST00000487068 ABCB7O75027 752 aa12□□□□□ -0.49
NEK4-204ENST00000487068 ZBED4O75132 1171 aa12□□□□□ -0.49
NEK4-204ENST00000487068 CYP21A2P08686 494 aa12□□□□□ -0.49
NEK4-204ENST00000487068 PRKCSHP14314 528 aaPredicted RBP12□□□□□ -0.49
NEK4-204ENST00000487068 ERCC3P19447 782 aa12□□□□□ -0.49
NEK4-204ENST00000487068 RGS2P41220 211 aa12□□□□□ -0.49
NEK4-204ENST00000487068 NT5C2P49902 561 aa12□□□□□ -0.49
NEK4-204ENST00000487068 C1QBPQ07021 282 aaKnown RBP12□□□□□ -0.49
NEK4-204ENST00000487068 CCDC178Q5BJE1 867 aa12□□□□□ -0.49
NEK4-204ENST00000487068 CPXCR1Q8N123 301 aa12□□□□□ -0.49
NEK4-204ENST00000487068 PRPF38AQ8NAV1 312 aaKnown RBP12□□□□□ -0.49
NEK4-204ENST00000487068 GMCL1Q96IK5 515 aa12□□□□□ -0.49
NEK4-204ENST00000487068 APBA2Q99767 749 aa12□□□□□ -0.49
NEK4-204ENST00000487068 TMEM47Q9BQJ4 181 aa12□□□□□ -0.49
NEK4-204ENST00000487068 MOV10L1Q9BXT6 1211 aaKnown RBP12□□□□□ -0.49
NEK4-204ENST00000487068 TNKSO95271 1327 aa12□□□□□ -0.49
NEK4-204ENST00000487068 BAZ2BQ9UIF8 2168 aaKnown RBP11.99□□□□□ -0.49
NEK4-204ENST00000487068 INHAP05111 366 aa11.99□□□□□ -0.49
NEK4-204ENST00000487068 ZKSCAN1P17029 563 aaPredicted RBP11.99□□□□□ -0.49
NEK4-204ENST00000487068 IRF5Q13568 498 aa11.99□□□□□ -0.49
NEK4-204ENST00000487068 TMEM132BQ14DG7 1078 aa11.99□□□□□ -0.49
NEK4-204ENST00000487068 SART3Q15020 963 aaKnown RBP11.99□□□□□ -0.49
NEK4-204ENST00000487068 IFIT1BQ5T764 474 aaKnown RBP11.99□□□□□ -0.49
NEK4-204ENST00000487068 SNRNP48Q6IEG0 339 aaKnown RBP11.99□□□□□ -0.49
NEK4-204ENST00000487068 POTEEQ6S8J3 1075 aa11.99□□□□□ -0.49
NEK4-204ENST00000487068 FAM160B2Q86V87 743 aa11.99□□□□□ -0.49
NEK4-204ENST00000487068 NCOA7Q8NI08 942 aa11.99□□□□□ -0.49
NEK4-204ENST00000487068 CHURC1Q8WUH1 139 aa11.99□□□□□ -0.49
NEK4-204ENST00000487068 DCAF4Q8WV16 495 aa11.99□□□□□ -0.49
NEK4-204ENST00000487068 MAP4K1Q92918 833 aa11.99□□□□□ -0.49
NEK4-204ENST00000487068 ZSCAN10Q96SZ4 725 aaPredicted RBP11.99□□□□□ -0.49
NEK4-204ENST00000487068 GPCPD1Q9NPB8 672 aa11.99□□□□□ -0.49
NEK4-204ENST00000487068 TCP11L1Q9NUJ3 509 aa11.99□□□□□ -0.49
NEK4-204ENST00000487068 ZSWIM5Q9P217 1185 aa11.99□□□□□ -0.49
NEK4-204ENST00000487068 LCTP09848 1927 aa11.99□□□□□ -0.49
NEK4-204ENST00000487068 E7EWF7 191 aa11.98□□□□□ -0.49
NEK4-204ENST00000487068 SLC25A27O95847 323 aa11.98□□□□□ -0.49
NEK4-204ENST00000487068 HMGCRP04035 888 aa11.98□□□□□ -0.49
NEK4-204ENST00000487068 COPB2P35606 906 aa11.98□□□□□ -0.49
NEK4-204ENST00000487068 STAT3P40763 770 aa11.98□□□□□ -0.49
NEK4-204ENST00000487068 MAP2K5Q13163 448 aa11.98□□□□□ -0.49
NEK4-204ENST00000487068 RNF20Q5VTR2 975 aa11.98□□□□□ -0.49
NEK4-204ENST00000487068 RCSD1Q6JBY9 416 aa11.98□□□□□ -0.49
NEK4-204ENST00000487068 CCDC174Q6PII3 467 aa11.98□□□□□ -0.49
NEK4-204ENST00000487068 CHRDL2Q6WN34 429 aa11.98□□□□□ -0.49
NEK4-204ENST00000487068 DPP9Q86TI2 863 aa11.98□□□□□ -0.49
NEK4-204ENST00000487068 PNMA1Q8ND90 353 aa11.98□□□□□ -0.49
NEK4-204ENST00000487068 SHCBP1Q8NEM2 672 aa11.98□□□□□ -0.49
NEK4-204ENST00000487068 PXYLP1Q8TE99 480 aa11.98□□□□□ -0.49
NEK4-204ENST00000487068 TEX13BQ9BXU2 312 aa11.98□□□□□ -0.49
NEK4-204ENST00000487068 LSG1Q9H089 658 aaKnown RBP11.98□□□□□ -0.49
NEK4-204ENST00000487068 RNF208Q9H0X6 261 aa11.98□□□□□ -0.49
NEK4-204ENST00000487068 MROH8Q9H579 483 aa11.98□□□□□ -0.49
NEK4-204ENST00000487068 RAVER2Q9HCJ3 691 aaKnown RBP11.98□□□□□ -0.49
NEK4-204ENST00000487068 HOMER2Q9NSB8 354 aa11.98□□□□□ -0.49
NEK4-204ENST00000487068 SLC15A5A6NIM6 579 aa11.97□□□□□ -0.49
NEK4-204ENST00000487068 IFIT3O14879 490 aaKnown RBP11.97□□□□□ -0.49
NEK4-204ENST00000487068 DHX16O60231 1041 aaKnown RBP11.97□□□□□ -0.49
NEK4-204ENST00000487068 PDHBP11177 359 aa11.97□□□□□ -0.49
NEK4-204ENST00000487068 FCER1AP12319 257 aa11.97□□□□□ -0.49
NEK4-204ENST00000487068 PTPREP23469 700 aa11.97□□□□□ -0.49
NEK4-204ENST00000487068 ADORA2AP29274 412 aa11.97□□□□□ -0.49
NEK4-204ENST00000487068 KCTD2Q14681 263 aa11.97□□□□□ -0.49
NEK4-204ENST00000487068 MTFR1Q15390 333 aa11.97□□□□□ -0.49
NEK4-204ENST00000487068 CHST3Q7LGC8 479 aa11.97□□□□□ -0.49
NEK4-204ENST00000487068 DGKHQ86XP1 1220 aa11.97□□□□□ -0.49
NEK4-204ENST00000487068 ENAHQ8N8S7 591 aaPredicted RBP11.97□□□□□ -0.49
NEK4-204ENST00000487068 NKX2-3Q8TAU0 364 aa11.97□□□□□ -0.49
NEK4-204ENST00000487068 TRIB2Q92519 343 aa11.97□□□□□ -0.49
NEK4-204ENST00000487068 TTC14Q96N46 770 aa11.97□□□□□ -0.49
NEK4-204ENST00000487068 MMP19Q99542 508 aa11.97□□□□□ -0.49
NEK4-204ENST00000487068 SLC5A4Q9NY91 659 aa11.97□□□□□ -0.49
NEK4-204ENST00000487068 ZNF214Q9UL59 606 aaPredicted RBP11.97□□□□□ -0.49
NEK4-204ENST00000487068 SLC27A2O14975 620 aa11.96□□□□□ -0.49
NEK4-204ENST00000487068 GOLGA8HP0CJ92 632 aa11.96□□□□□ -0.49
NEK4-204ENST00000487068 CCL5P13501 91 aa11.96□□□□□ -0.49
NEK4-204ENST00000487068 SLC16A2P36021 539 aa11.96□□□□□ -0.49
NEK4-204ENST00000487068 SNAP25P60880 206 aa11.96□□□□□ -0.49
NEK4-204ENST00000487068 GRB14Q14449 540 aa11.96□□□□□ -0.49
NEK4-204ENST00000487068 WTAPQ15007 396 aa11.96□□□□□ -0.49
NEK4-204ENST00000487068 CREB3L3Q68CJ9 461 aa11.96□□□□□ -0.49
NEK4-204ENST00000487068 CYB5R4Q7L1T6 521 aa11.96□□□□□ -0.49
NEK4-204ENST00000487068 RIOX2Q8IUF8 465 aa11.96□□□□□ -0.49
NEK4-204ENST00000487068 TRMT44Q8IYL2 757 aaKnown RBP11.96□□□□□ -0.49
NEK4-204ENST00000487068 DPF3Q92784 378 aa11.96□□□□□ -0.49
NEK4-204ENST00000487068 SHISA4Q96DD7 197 aa11.96□□□□□ -0.49
NEK4-204ENST00000487068 SLC38A10Q9HBR0 1119 aa11.96□□□□□ -0.49
NEK4-204ENST00000487068 PRR12Q9ULL5 1215 aa11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms