RNA–Protein interactions for RNA: ENST00000486319.5

POLR2J3-204, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 1 (best)

Gene POLR2J3, Length 1,532 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-204ENST00000486319 XBP1P17861 261 aa16.85■□□□□ 0.29
POLR2J3-204ENST00000486319 PTPRAP18433 802 aa16.85■□□□□ 0.29
POLR2J3-204ENST00000486319 ZSCAN23Q3MJ62 389 aa16.85■□□□□ 0.29
POLR2J3-204ENST00000486319 ZHX2Q9Y6X8 837 aa16.85■□□□□ 0.29
POLR2J3-204ENST00000486319 SIPA1L1O43166 1804 aa16.85■□□□□ 0.29
POLR2J3-204ENST00000486319 OTOFQ9HC10 1997 aa16.85■□□□□ 0.29
POLR2J3-204ENST00000486319 GOLGA6L4A6NEF3 574 aa16.84■□□□□ 0.29
POLR2J3-204ENST00000486319 GNAQP50148 359 aa16.84■□□□□ 0.29
POLR2J3-204ENST00000486319 ZNF445P59923 1031 aa16.84■□□□□ 0.29
POLR2J3-204ENST00000486319 SAFBQ15424 915 aaKnown RBP eCLIP16.84■□□□□ 0.29
POLR2J3-204ENST00000486319 L1TD1Q5T7N2 865 aaKnown RBP16.84■□□□□ 0.29
POLR2J3-204ENST00000486319 METTL16Q86W50 562 aaKnown RBP16.84■□□□□ 0.29
POLR2J3-204ENST00000486319 CCDC82Q8N4S0 544 aa16.84■□□□□ 0.29
POLR2J3-204ENST00000486319 CFHR5Q9BXR6 569 aa16.84■□□□□ 0.29
POLR2J3-204ENST00000486319 TMEM63CQ9P1W3 806 aa16.84■□□□□ 0.29
POLR2J3-204ENST00000486319 RBM27Q9P2N5 1060 aaKnown RBP16.84■□□□□ 0.29
POLR2J3-204ENST00000486319 STX8Q9UNK0 236 aa16.84■□□□□ 0.29
POLR2J3-204ENST00000486319 GREB1LQ9C091 1923 aaPredicted RBP16.83■□□□□ 0.29
POLR2J3-204ENST00000486319 CAP2P40123 477 aa16.83■□□□□ 0.28
POLR2J3-204ENST00000486319 NOVP48745 357 aa16.83■□□□□ 0.28
POLR2J3-204ENST00000486319 FUT2Q10981 343 aa16.83■□□□□ 0.28
POLR2J3-204ENST00000486319 GNL2Q13823 731 aaKnown RBP16.83■□□□□ 0.28
POLR2J3-204ENST00000486319 CMTR1Q8N1G2 835 aaKnown RBP16.83■□□□□ 0.28
POLR2J3-204ENST00000486319 TMEM47Q9BQJ4 181 aa16.83■□□□□ 0.28
POLR2J3-204ENST00000486319 GJB4Q9NTQ9 266 aa16.83■□□□□ 0.28
POLR2J3-204ENST00000486319 RCOR1Q9UKL0 485 aa16.83■□□□□ 0.28
POLR2J3-204ENST00000486319 KCNH4Q9UQ05 1017 aa16.83■□□□□ 0.28
POLR2J3-204ENST00000486319 MYH4Q9Y623 1939 aa16.83■□□□□ 0.28
POLR2J3-204ENST00000486319 FSD2A1L4K1 749 aa16.82■□□□□ 0.28
POLR2J3-204ENST00000486319 GPR25O00155 361 aa16.82■□□□□ 0.28
POLR2J3-204ENST00000486319 CXCL11O14625 94 aa16.82■□□□□ 0.28
POLR2J3-204ENST00000486319 PLEKHA8P1O95397 391 aa16.82■□□□□ 0.28
POLR2J3-204ENST00000486319 GUCY1A2P33402 732 aa16.82■□□□□ 0.28
POLR2J3-204ENST00000486319 GRM4Q14833 912 aa16.82■□□□□ 0.28
POLR2J3-204ENST00000486319 MYSM1Q5VVJ2 828 aa16.82■□□□□ 0.28
POLR2J3-204ENST00000486319 FAM43AQ8N2R8 423 aa16.82■□□□□ 0.28
POLR2J3-204ENST00000486319 USP28Q96RU2 1077 aa16.82■□□□□ 0.28
POLR2J3-204ENST00000486319 R3HDMLQ9H3Y0 253 aa16.82■□□□□ 0.28
POLR2J3-204ENST00000486319 RTEL1Q9NZ71 1219 aa16.82■□□□□ 0.28
POLR2J3-204ENST00000486319 CNTNAP5Q8WYK1 1306 aa16.81■□□□□ 0.28
POLR2J3-204ENST00000486319 MMP1P03956 469 aa16.81■□□□□ 0.28
POLR2J3-204ENST00000486319 TOP1P11387 765 aaKnown RBP16.81■□□□□ 0.28
POLR2J3-204ENST00000486319 U2AF2P26368 475 aaKnown RBP eCLIP16.81■□□□□ 0.28
POLR2J3-204ENST00000486319 NOM1Q5C9Z4 860 aaKnown RBP16.81■□□□□ 0.28
POLR2J3-204ENST00000486319 PPP4R3BQ5MIZ7 849 aa16.81■□□□□ 0.28
POLR2J3-204ENST00000486319 ZNF296Q8WUU4 475 aaPredicted RBP16.81■□□□□ 0.28
POLR2J3-204ENST00000486319 DNAJC18Q9H819 358 aa16.81■□□□□ 0.28
POLR2J3-204ENST00000486319 AFG3L2Q9Y4W6 797 aa16.81■□□□□ 0.28
POLR2J3-204ENST00000486319 KIF28PB7ZC32 967 aa16.8■□□□□ 0.28
POLR2J3-204ENST00000486319 BTBD19C9JJ37 291 aa16.8■□□□□ 0.28
POLR2J3-204ENST00000486319 LETM1O95202 739 aaPredicted RBP16.8■□□□□ 0.28
POLR2J3-204ENST00000486319 CRHR2Q13324 411 aa16.8■□□□□ 0.28
POLR2J3-204ENST00000486319 RRP1BQ14684 758 aaKnown RBP16.8■□□□□ 0.28
POLR2J3-204ENST00000486319 CCDC183Q5T5S1 534 aa16.8■□□□□ 0.28
POLR2J3-204ENST00000486319 SRBD1Q8N5C6 995 aaKnown RBP16.8■□□□□ 0.28
POLR2J3-204ENST00000486319 CEP95Q96GE4 821 aa16.8■□□□□ 0.28
POLR2J3-204ENST00000486319 CCDC17Q96LX7 622 aa16.8■□□□□ 0.28
POLR2J3-204ENST00000486319 LZTS2Q9BRK4 669 aa16.8■□□□□ 0.28
POLR2J3-204ENST00000486319 FOXP1Q9H334 677 aaPredicted RBP16.8■□□□□ 0.28
POLR2J3-204ENST00000486319 POLR3EQ9NVU0 708 aa16.8■□□□□ 0.28
POLR2J3-204ENST00000486319 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.8■□□□□ 0.28
POLR2J3-204ENST00000486319 V9GY48 417 aaPredicted RBP16.8■□□□□ 0.28
POLR2J3-204ENST00000486319 TRIM75PA6NK02 468 aa16.8■□□□□ 0.28
POLR2J3-204ENST00000486319 YEATS4O95619 227 aa16.8■□□□□ 0.28
POLR2J3-204ENST00000486319 SHMT1P34896 483 aa16.8■□□□□ 0.28
POLR2J3-204ENST00000486319 CEBPZQ03701 1054 aaKnown RBP16.8■□□□□ 0.28
POLR2J3-204ENST00000486319 TAF1CQ15572 869 aaPredicted RBP16.8■□□□□ 0.28
POLR2J3-204ENST00000486319 PKN1Q16512 942 aa16.8■□□□□ 0.28
POLR2J3-204ENST00000486319 CCDC84Q86UT8 332 aaPredicted RBP16.8■□□□□ 0.28
POLR2J3-204ENST00000486319 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.8■□□□□ 0.28
POLR2J3-204ENST00000486319 ZFYVE28Q9HCC9 887 aa16.8■□□□□ 0.28
POLR2J3-204ENST00000486319 ZCCHC17Q9NP64 241 aaKnown RBP16.8■□□□□ 0.28
POLR2J3-204ENST00000486319 BAZ2BQ9UIF8 2168 aaKnown RBP16.79■□□□□ 0.28
POLR2J3-204ENST00000486319 IGKV6D-41A0A0C4DH26 115 aa16.79■□□□□ 0.28
POLR2J3-204ENST00000486319 USP17L5A8MUK1 530 aa16.79■□□□□ 0.28
POLR2J3-204ENST00000486319 ASNSP08243 561 aa16.79■□□□□ 0.28
POLR2J3-204ENST00000486319 AKR1B1P15121 316 aa16.79■□□□□ 0.28
POLR2J3-204ENST00000486319 FASTKD5Q7L8L6 764 aaKnown RBP16.79■□□□□ 0.28
POLR2J3-204ENST00000486319 MTMR4Q9NYA4 1195 aa16.79■□□□□ 0.28
POLR2J3-204ENST00000486319 MAD2L2Q9UI95 211 aa16.79■□□□□ 0.28
POLR2J3-204ENST00000486319 A0A0G2JLL6 359 aaPredicted RBP16.78■□□□□ 0.28
POLR2J3-204ENST00000486319 PALM3A6NDB9 673 aaPredicted RBP16.78■□□□□ 0.28
POLR2J3-204ENST00000486319 FKTNO75072 461 aa16.78■□□□□ 0.28
POLR2J3-204ENST00000486319 GDF11O95390 407 aa16.78■□□□□ 0.28
POLR2J3-204ENST00000486319 NASPP49321 788 aaPredicted RBP16.78■□□□□ 0.28
POLR2J3-204ENST00000486319 MRE11P49959 708 aa16.78■□□□□ 0.28
POLR2J3-204ENST00000486319 SPP2Q13103 211 aa16.78■□□□□ 0.28
POLR2J3-204ENST00000486319 TATDN1Q6P1N9 297 aa16.78■□□□□ 0.28
POLR2J3-204ENST00000486319 PRRT2Q7Z6L0 340 aaPredicted RBP16.78■□□□□ 0.28
POLR2J3-204ENST00000486319 ANKRD23Q86SG2 305 aa16.78■□□□□ 0.28
POLR2J3-204ENST00000486319 NOSTRINQ8IVI9 506 aa16.78■□□□□ 0.28
POLR2J3-204ENST00000486319 DIS3L2Q8IYB7 885 aaKnown RBP16.78■□□□□ 0.28
POLR2J3-204ENST00000486319 ZNF280CQ8ND82 737 aa16.78■□□□□ 0.28
POLR2J3-204ENST00000486319 KCNG4Q8TDN1 519 aa16.78■□□□□ 0.28
POLR2J3-204ENST00000486319 PGBD1Q96JS3 809 aa16.78■□□□□ 0.28
POLR2J3-204ENST00000486319 GINM1Q9NU53 330 aa16.78■□□□□ 0.28
POLR2J3-204ENST00000486319 KCNJ14Q9UNX9 436 aa16.78■□□□□ 0.28
POLR2J3-204ENST00000486319 PDHXO00330 501 aa16.77■□□□□ 0.28
POLR2J3-204ENST00000486319 SCG2P13521 617 aa16.77■□□□□ 0.28
POLR2J3-204ENST00000486319 SMARCA1P28370 1054 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms