RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 NMT2O60551 498 aa21.78■■□□□ 1.08
PRPF40A-209ENST00000486100 MSCO60682 206 aa21.78■■□□□ 1.08
PRPF40A-209ENST00000486100 CNGA1P29973 690 aa21.78■■□□□ 1.08
PRPF40A-209ENST00000486100 SNRNP48Q6IEG0 339 aaKnown RBP21.78■■□□□ 1.08
PRPF40A-209ENST00000486100 TRPV1Q8NER1 839 aa21.78■■□□□ 1.08
PRPF40A-209ENST00000486100 MAML3Q96JK9 1138 aa21.78■■□□□ 1.08
PRPF40A-209ENST00000486100 C11orf49Q9H6J7 331 aa21.78■■□□□ 1.08
PRPF40A-209ENST00000486100 SLC38A10Q9HBR0 1119 aa21.78■■□□□ 1.08
PRPF40A-209ENST00000486100 TOMM22Q9NS69 142 aa21.78■■□□□ 1.08
PRPF40A-209ENST00000486100 DDX20Q9UHI6 824 aaKnown RBP21.78■■□□□ 1.08
PRPF40A-209ENST00000486100 DIS3Q9Y2L1 958 aaKnown RBP21.78■■□□□ 1.08
PRPF40A-209ENST00000486100 TMEM232C9JQI7 657 aa21.77■■□□□ 1.08
PRPF40A-209ENST00000486100 EVI5O60447 810 aa21.77■■□□□ 1.08
PRPF40A-209ENST00000486100 FDX1P10109 184 aa21.77■■□□□ 1.08
PRPF40A-209ENST00000486100 CYBAP13498 195 aa21.77■■□□□ 1.08
PRPF40A-209ENST00000486100 MCCP23508 829 aa21.77■■□□□ 1.08
PRPF40A-209ENST00000486100 PDE4AP27815 886 aa21.77■■□□□ 1.08
PRPF40A-209ENST00000486100 SLC1A4P43007 532 aa21.77■■□□□ 1.08
PRPF40A-209ENST00000486100 RRP12Q5JTH9 1297 aaKnown RBP21.77■■□□□ 1.08
PRPF40A-209ENST00000486100 CPXCR1Q8N123 301 aa21.77■■□□□ 1.08
PRPF40A-209ENST00000486100 CHURC1Q8WUH1 139 aa21.77■■□□□ 1.08
PRPF40A-209ENST00000486100 STAG1Q8WVM7 1258 aa21.77■■□□□ 1.08
PRPF40A-209ENST00000486100 TCP11L1Q9NUJ3 509 aa21.77■■□□□ 1.08
PRPF40A-209ENST00000486100 RIPK3Q9Y572 518 aa21.77■■□□□ 1.08
PRPF40A-209ENST00000486100 PLA2G6O60733 806 aa21.76■■□□□ 1.07
PRPF40A-209ENST00000486100 PGK2P07205 417 aa21.76■■□□□ 1.07
PRPF40A-209ENST00000486100 PCP11498 1178 aaKnown RBP21.76■■□□□ 1.07
PRPF40A-209ENST00000486100 OAZ1P54368 228 aa21.76■■□□□ 1.07
PRPF40A-209ENST00000486100 HAND2P61296 217 aa21.76■■□□□ 1.07
PRPF40A-209ENST00000486100 ZNF792Q3KQV3 632 aa21.76■■□□□ 1.07
PRPF40A-209ENST00000486100 HABP4Q5JVS0 413 aaKnown RBP21.76■■□□□ 1.07
PRPF40A-209ENST00000486100 AKNAD1Q5T1N1 836 aa21.76■■□□□ 1.07
PRPF40A-209ENST00000486100 RCSD1Q6JBY9 416 aa21.76■■□□□ 1.07
PRPF40A-209ENST00000486100 MFSD6Q6ZSS7 791 aa21.76■■□□□ 1.07
PRPF40A-209ENST00000486100 FAM160B2Q86V87 743 aa21.76■■□□□ 1.07
PRPF40A-209ENST00000486100 RAVER2Q9HCJ3 691 aaKnown RBP21.76■■□□□ 1.07
PRPF40A-209ENST00000486100 STAT2P52630 851 aa21.75■■□□□ 1.07
PRPF40A-209ENST00000486100 ISY1Q9ULR0 285 aaKnown RBP21.75■■□□□ 1.07
PRPF40A-209ENST00000486100 ZNF236Q9UL36 1845 aa21.74■■□□□ 1.07
PRPF40A-209ENST00000486100 ZNF213O14771 459 aa21.74■■□□□ 1.07
PRPF40A-209ENST00000486100 COL6A1P12109 1028 aa21.74■■□□□ 1.07
PRPF40A-209ENST00000486100 SLC4A3P48751 1232 aa21.74■■□□□ 1.07
PRPF40A-209ENST00000486100 CHMP4CQ96CF2 233 aa21.74■■□□□ 1.07
PRPF40A-209ENST00000486100 RNF41Q9H4P4 317 aaPredicted RBP21.74■■□□□ 1.07
PRPF40A-209ENST00000486100 COLQQ9Y215 455 aaPredicted RBP21.74■■□□□ 1.07
PRPF40A-209ENST00000486100 PARP14Q460N5 1801 aa21.73■■□□□ 1.07
PRPF40A-209ENST00000486100 SEPT4O43236 478 aa21.73■■□□□ 1.07
PRPF40A-209ENST00000486100 SLC34A2O95436 690 aa21.73■■□□□ 1.07
PRPF40A-209ENST00000486100 IKQ13123 557 aaPredicted RBP21.73■■□□□ 1.07
PRPF40A-209ENST00000486100 PRAMEF19Q5SWL8 479 aa21.73■■□□□ 1.07
PRPF40A-209ENST00000486100 TTC22Q5TAA0 569 aa21.73■■□□□ 1.07
PRPF40A-209ENST00000486100 KCTD1Q719H9 257 aa21.73■■□□□ 1.07
PRPF40A-209ENST00000486100 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.73■■□□□ 1.07
PRPF40A-209ENST00000486100 DDX11Q96FC9 970 aa21.73■■□□□ 1.07
PRPF40A-209ENST00000486100 TINF2Q9BSI4 451 aa21.73■■□□□ 1.07
PRPF40A-209ENST00000486100 DSCC1Q9BVC3 393 aa21.73■■□□□ 1.07
PRPF40A-209ENST00000486100 FBXO40Q9UH90 709 aa21.73■■□□□ 1.07
PRPF40A-209ENST00000486100 NRBP1Q9UHY1 535 aa21.73■■□□□ 1.07
PRPF40A-209ENST00000486100 TOP1P11387 765 aaKnown RBP21.72■■□□□ 1.07
PRPF40A-209ENST00000486100 GSPT1P15170 499 aaKnown RBP21.72■■□□□ 1.07
PRPF40A-209ENST00000486100 TBC1D10CQ8IV04 446 aa21.72■■□□□ 1.07
PRPF40A-209ENST00000486100 CHST13Q8NET6 341 aa21.72■■□□□ 1.07
PRPF40A-209ENST00000486100 DCAF4Q8WV16 495 aa21.72■■□□□ 1.07
PRPF40A-209ENST00000486100 TTC14Q96N46 770 aa21.72■■□□□ 1.07
PRPF40A-209ENST00000486100 TMEM47Q9BQJ4 181 aa21.72■■□□□ 1.07
PRPF40A-209ENST00000486100 PFASO15067 1338 aa21.72■■□□□ 1.07
PRPF40A-209ENST00000486100 NT5C2P49902 561 aa21.71■■□□□ 1.07
PRPF40A-209ENST00000486100 DNAJC25-GNG10A0A024R161 153 aa21.7■■□□□ 1.06
PRPF40A-209ENST00000486100 CHRDL2Q6WN34 429 aa21.7■■□□□ 1.06
PRPF40A-209ENST00000486100 ANKRD35Q8N283 1001 aa21.7■■□□□ 1.06
PRPF40A-209ENST00000486100 MSL3Q8N5Y2 521 aaKnown RBP21.7■■□□□ 1.06
PRPF40A-209ENST00000486100 ARRDC4Q8NCT1 418 aa21.7■■□□□ 1.06
PRPF40A-209ENST00000486100 ESR2Q92731 530 aa21.7■■□□□ 1.06
PRPF40A-209ENST00000486100 CTNNA3Q9UI47 895 aa21.7■■□□□ 1.06
PRPF40A-209ENST00000486100 PRR12Q9ULL5 1215 aa21.7■■□□□ 1.06
PRPF40A-209ENST00000486100 MTMR7Q9Y216 660 aa21.7■■□□□ 1.06
PRPF40A-209ENST00000486100 MYH4Q9Y623 1939 aa21.7■■□□□ 1.06
PRPF40A-209ENST00000486100 AGBL1Q96MI9 1066 aa21.69■■□□□ 1.06
PRPF40A-209ENST00000486100 ZNF536O15090 1300 aa21.69■■□□□ 1.06
PRPF40A-209ENST00000486100 COL11A1P12107 1806 aaPredicted RBP21.69■■□□□ 1.06
PRPF40A-209ENST00000486100 DNM1LO00429 736 aa21.68■■□□□ 1.06
PRPF40A-209ENST00000486100 IMMTQ16891 758 aaKnown RBP21.68■■□□□ 1.06
PRPF40A-209ENST00000486100 CCDC96Q2M329 555 aa21.68■■□□□ 1.06
PRPF40A-209ENST00000486100 TKFCQ3LXA3 575 aa21.68■■□□□ 1.06
PRPF40A-209ENST00000486100 ANO1Q5XXA6 986 aa21.68■■□□□ 1.06
PRPF40A-209ENST00000486100 MAMDC4Q6UXC1 1216 aa21.68■■□□□ 1.06
PRPF40A-209ENST00000486100 BTNL9Q6UXG8 535 aa21.68■■□□□ 1.06
PRPF40A-209ENST00000486100 RASGRP2Q7LDG7 609 aa21.68■■□□□ 1.06
PRPF40A-209ENST00000486100 ZNF467Q7Z7K2 595 aaPredicted RBP21.68■■□□□ 1.06
PRPF40A-209ENST00000486100 C7orf61Q8IZ16 206 aa21.68■■□□□ 1.06
PRPF40A-209ENST00000486100 SENP6Q9GZR1 1112 aaPredicted RBP21.68■■□□□ 1.06
PRPF40A-209ENST00000486100 NEDD4P46934 1319 aa21.67■■□□□ 1.06
PRPF40A-209ENST00000486100 SYNGAP1Q96PV0 1343 aa21.67■■□□□ 1.06
PRPF40A-209ENST00000486100 ZNF865P0CJ78 1059 aaPredicted RBP21.67■■□□□ 1.06
PRPF40A-209ENST00000486100 TAL1P17542 331 aaPredicted RBP21.67■■□□□ 1.06
PRPF40A-209ENST00000486100 TTBK2Q6IQ55 1244 aa21.67■■□□□ 1.06
PRPF40A-209ENST00000486100 DGKHQ86XP1 1220 aa21.67■■□□□ 1.06
PRPF40A-209ENST00000486100 IL25Q9H293 177 aa21.67■■□□□ 1.06
PRPF40A-209ENST00000486100 ACAD9Q9H845 621 aa21.67■■□□□ 1.06
PRPF40A-209ENST00000486100 HOMER2Q9NSB8 354 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms