RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 BARHL2Q9NY43 387 aa16.62■□□□□ 0.25
COL9A1-207ENST00000486080 PAPPA2Q9BXP8 1791 aa16.62■□□□□ 0.25
COL9A1-207ENST00000486080 NLRP5P59047 1200 aa16.61■□□□□ 0.25
COL9A1-207ENST00000486080 DGKZQ13574 1117 aa16.61■□□□□ 0.25
COL9A1-207ENST00000486080 MYSM1Q5VVJ2 828 aa16.61■□□□□ 0.25
COL9A1-207ENST00000486080 NOSTRINQ8IVI9 506 aa16.61■□□□□ 0.25
COL9A1-207ENST00000486080 FOXP1Q9H334 677 aaPredicted RBP16.61■□□□□ 0.25
COL9A1-207ENST00000486080 SH3GLB2Q9NR46 395 aa16.61■□□□□ 0.25
COL9A1-207ENST00000486080 PICK1Q9NRD5 415 aa16.61■□□□□ 0.25
COL9A1-207ENST00000486080 CLEC11AQ9Y240 323 aa16.61■□□□□ 0.25
COL9A1-207ENST00000486080 PPP1R11O60927 126 aaPredicted RBP16.61■□□□□ 0.25
COL9A1-207ENST00000486080 GADD45BO75293 160 aaPredicted RBP16.61■□□□□ 0.25
COL9A1-207ENST00000486080 KRT2P35908 639 aa16.61■□□□□ 0.25
COL9A1-207ENST00000486080 IKQ13123 557 aaPredicted RBP16.61■□□□□ 0.25
COL9A1-207ENST00000486080 TMEM87AQ8NBN3 555 aa16.61■□□□□ 0.25
COL9A1-207ENST00000486080 MTMR8Q96EF0 704 aa16.61■□□□□ 0.25
COL9A1-207ENST00000486080 USP28Q96RU2 1077 aa16.61■□□□□ 0.25
COL9A1-207ENST00000486080 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.61■□□□□ 0.25
COL9A1-207ENST00000486080 PNMA6FA0A0J9YX94 578 aa16.6■□□□□ 0.25
COL9A1-207ENST00000486080 SNAP25P60880 206 aa16.6■□□□□ 0.25
COL9A1-207ENST00000486080 SPP2Q13103 211 aa16.6■□□□□ 0.25
COL9A1-207ENST00000486080 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.6■□□□□ 0.25
COL9A1-207ENST00000486080 COA7Q96BR5 231 aa16.6■□□□□ 0.25
COL9A1-207ENST00000486080 ZNF396Q96N95 335 aaPredicted RBP16.6■□□□□ 0.25
COL9A1-207ENST00000486080 KIAA1683Q9H0B3 1180 aa16.6■□□□□ 0.25
COL9A1-207ENST00000486080 FAM205CA6NFA0 338 aa16.59■□□□□ 0.25
COL9A1-207ENST00000486080 TRAK2O60296 914 aa16.59■□□□□ 0.25
COL9A1-207ENST00000486080 NAPAP54920 295 aa16.59■□□□□ 0.25
COL9A1-207ENST00000486080 MTMR2Q13614 643 aa16.59■□□□□ 0.25
COL9A1-207ENST00000486080 TPRNQ4KMQ1 711 aa16.59■□□□□ 0.25
COL9A1-207ENST00000486080 NOM1Q5C9Z4 860 aaKnown RBP16.59■□□□□ 0.25
COL9A1-207ENST00000486080 EARS2Q5JPH6 523 aaKnown RBP16.59■□□□□ 0.25
COL9A1-207ENST00000486080 NOL9Q5SY16 702 aaKnown RBP16.59■□□□□ 0.25
COL9A1-207ENST00000486080 SYDE2Q5VT97 1194 aa16.59■□□□□ 0.25
COL9A1-207ENST00000486080 MAP1SQ66K74 1059 aaPredicted RBP16.59■□□□□ 0.25
COL9A1-207ENST00000486080 BTNL9Q6UXG8 535 aa16.59■□□□□ 0.25
COL9A1-207ENST00000486080 MOB2Q70IA6 237 aa16.59■□□□□ 0.25
COL9A1-207ENST00000486080 LEO1Q8WVC0 666 aaPredicted RBP16.59■□□□□ 0.25
COL9A1-207ENST00000486080 TNFRSF25Q93038 417 aa16.59■□□□□ 0.25
COL9A1-207ENST00000486080 SPATA32Q96LK8 384 aa16.59■□□□□ 0.25
COL9A1-207ENST00000486080 WDR18Q9BV38 432 aa16.59■□□□□ 0.25
COL9A1-207ENST00000486080 ZHX2Q9Y6X8 837 aa16.59■□□□□ 0.25
COL9A1-207ENST00000486080 DCAF8L1A6NGE4 600 aa16.59■□□□□ 0.25
COL9A1-207ENST00000486080 ZBTB5O15062 677 aa16.59■□□□□ 0.25
COL9A1-207ENST00000486080 PPP1R12BO60237 982 aaPredicted RBP16.59■□□□□ 0.25
COL9A1-207ENST00000486080 MAP3K9P80192 1104 aa16.59■□□□□ 0.25
COL9A1-207ENST00000486080 VGLL4Q14135 290 aa16.59■□□□□ 0.25
COL9A1-207ENST00000486080 QRICH1Q2TAL8 776 aa16.59■□□□□ 0.25
COL9A1-207ENST00000486080 SCAND2PQ9GZW5 306 aaPredicted RBP16.59■□□□□ 0.25
COL9A1-207ENST00000486080 EMILIN3Q9NT22 766 aa16.59■□□□□ 0.25
COL9A1-207ENST00000486080 CFAP45Q9UL16 551 aa16.59■□□□□ 0.25
COL9A1-207ENST00000486080 CLIC4Q9Y696 253 aa16.59■□□□□ 0.25
COL9A1-207ENST00000486080 SMCHD1A6NHR9 2005 aa16.58■□□□□ 0.24
COL9A1-207ENST00000486080 TRIM75PA6NK02 468 aa16.58■□□□□ 0.24
COL9A1-207ENST00000486080 PTMSP20962 102 aa16.58■□□□□ 0.24
COL9A1-207ENST00000486080 STAT2P52630 851 aa16.58■□□□□ 0.24
COL9A1-207ENST00000486080 FMR1Q06787 632 aaKnown RBP eCLIP16.58■□□□□ 0.24
COL9A1-207ENST00000486080 CDC37Q16543 378 aaPredicted RBP16.58■□□□□ 0.24
COL9A1-207ENST00000486080 ATL3Q6DD88 541 aa16.58■□□□□ 0.24
COL9A1-207ENST00000486080 ZNF280CQ8ND82 737 aa16.58■□□□□ 0.24
COL9A1-207ENST00000486080 CCDC148Q8NFR7 591 aa16.58■□□□□ 0.24
COL9A1-207ENST00000486080 BRMS1Q9HCU9 246 aa16.58■□□□□ 0.24
COL9A1-207ENST00000486080 FBXO28Q9NVF7 368 aa16.58■□□□□ 0.24
COL9A1-207ENST00000486080 PRR12Q9ULL5 1215 aa16.58■□□□□ 0.24
COL9A1-207ENST00000486080 PCDHA4Q9UN74 947 aa16.58■□□□□ 0.24
COL9A1-207ENST00000486080 SNCAIPQ9Y6H5 919 aa16.58■□□□□ 0.24
COL9A1-207ENST00000486080 TRAF5O00463 557 aa16.57■□□□□ 0.24
COL9A1-207ENST00000486080 CALML3P27482 149 aa16.57■□□□□ 0.24
COL9A1-207ENST00000486080 TOB1P50616 345 aaPredicted RBP16.57■□□□□ 0.24
COL9A1-207ENST00000486080 BLIDQ8IZY5 108 aa16.57■□□□□ 0.24
COL9A1-207ENST00000486080 GPT2Q8TD30 523 aa16.57■□□□□ 0.24
COL9A1-207ENST00000486080 ANP32EQ9BTT0 268 aa16.57■□□□□ 0.24
COL9A1-207ENST00000486080 AS3MTQ9HBK9 375 aa16.57■□□□□ 0.24
COL9A1-207ENST00000486080 RTEL1Q9NZ71 1219 aa16.57■□□□□ 0.24
COL9A1-207ENST00000486080 SMCO2A6NFE2 343 aa16.56■□□□□ 0.24
COL9A1-207ENST00000486080 NF2P35240 595 aa16.56■□□□□ 0.24
COL9A1-207ENST00000486080 IREB2P48200 963 aaKnown RBP16.56■□□□□ 0.24
COL9A1-207ENST00000486080 BACE1P56817 501 aa16.56■□□□□ 0.24
COL9A1-207ENST00000486080 RASGRP4Q8TDF6 673 aa16.56■□□□□ 0.24
COL9A1-207ENST00000486080 ZNF526Q8TF50 670 aaPredicted RBP16.56■□□□□ 0.24
COL9A1-207ENST00000486080 CNKSR2Q8WXI2 1034 aa16.56■□□□□ 0.24
COL9A1-207ENST00000486080 ZMYND12Q9H0C1 365 aa16.56■□□□□ 0.24
COL9A1-207ENST00000486080 NMRK2Q9NPI5 230 aa16.56■□□□□ 0.24
COL9A1-207ENST00000486080 RCOR1Q9UKL0 485 aa16.56■□□□□ 0.24
COL9A1-207ENST00000486080 DDX49Q9Y6V7 483 aaKnown RBP16.56■□□□□ 0.24
COL9A1-207ENST00000486080 ELP1O95163 1332 aa16.56■□□□□ 0.24
COL9A1-207ENST00000486080 hCG_1984214I3L0E3 225 aa16.56■□□□□ 0.24
COL9A1-207ENST00000486080 M0R2N6 131 aa16.56■□□□□ 0.24
COL9A1-207ENST00000486080 TTLL12Q14166 644 aaPredicted RBP16.56■□□□□ 0.24
COL9A1-207ENST00000486080 CSPP1Q1MSJ5 1256 aa16.56■□□□□ 0.24
COL9A1-207ENST00000486080 ANO1Q5XXA6 986 aa16.56■□□□□ 0.24
COL9A1-207ENST00000486080 SAMD1Q6SPF0 538 aaPredicted RBP16.56■□□□□ 0.24
COL9A1-207ENST00000486080 ZNF713Q8N859 430 aaPredicted RBP16.56■□□□□ 0.24
COL9A1-207ENST00000486080 DAGLBQ8NCG7 672 aa16.56■□□□□ 0.24
COL9A1-207ENST00000486080 CCDC12Q8WUD4 166 aaPredicted RBP16.56■□□□□ 0.24
COL9A1-207ENST00000486080 LPAR1Q92633 364 aa16.56■□□□□ 0.24
COL9A1-207ENST00000486080 KIFC2Q96AC6 838 aa16.56■□□□□ 0.24
COL9A1-207ENST00000486080 CLMNQ96JQ2 1002 aa16.56■□□□□ 0.24
COL9A1-207ENST00000486080 TAL1P17542 331 aaPredicted RBP16.55■□□□□ 0.24
COL9A1-207ENST00000486080 VCAM1P19320 739 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms