RNA–Protein interactions for RNA: ENST00000485744.5

HMCN1-204, Transcript of hemicentin 1, humanhuman

TSL 2

Gene HMCN1, Length 1,884 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1-204ENST00000485744 AIFM3Q96NN9 605 aa11.97□□□□□ -0.49
HMCN1-204ENST00000485744 PTPN18Q99952 460 aa11.97□□□□□ -0.49
HMCN1-204ENST00000485744 SLC26A6Q9BXS9 759 aa11.97□□□□□ -0.49
HMCN1-204ENST00000485744 RBM28Q9NW13 759 aaKnown RBP11.97□□□□□ -0.49
HMCN1-204ENST00000485744 HSP90AA1P07900 732 aaKnown RBP11.96□□□□□ -0.49
HMCN1-204ENST00000485744 FDPSP14324 419 aaKnown RBP11.96□□□□□ -0.49
HMCN1-204ENST00000485744 GTF2A2P52657 109 aa11.96□□□□□ -0.49
HMCN1-204ENST00000485744 GPAT2Q6NUI2 795 aa11.96□□□□□ -0.49
HMCN1-204ENST00000485744 PROCA1Q8NCQ7 364 aaPredicted RBP11.96□□□□□ -0.49
HMCN1-204ENST00000485744 JMJD4Q9H9V9 463 aa11.96□□□□□ -0.49
HMCN1-204ENST00000485744 V9GY48 417 aaPredicted RBP11.96□□□□□ -0.49
HMCN1-204ENST00000485744 CCDC196A0A1B0GTZ2 297 aa11.95□□□□□ -0.5
HMCN1-204ENST00000485744 BTBD19C9JJ37 291 aa11.95□□□□□ -0.5
HMCN1-204ENST00000485744 AOC2O75106 756 aa11.95□□□□□ -0.5
HMCN1-204ENST00000485744 IFNAR1P17181 557 aa11.95□□□□□ -0.5
HMCN1-204ENST00000485744 FOSBP53539 338 aa11.95□□□□□ -0.5
HMCN1-204ENST00000485744 DEFB115Q30KQ5 88 aa11.95□□□□□ -0.5
HMCN1-204ENST00000485744 POTEEQ6S8J3 1075 aa11.95□□□□□ -0.5
HMCN1-204ENST00000485744 FAM43AQ8N2R8 423 aa11.95□□□□□ -0.5
HMCN1-204ENST00000485744 PIGSQ96S52 555 aa11.95□□□□□ -0.5
HMCN1-204ENST00000485744 GJB4Q9NTQ9 266 aa11.95□□□□□ -0.5
HMCN1-204ENST00000485744 PRR12Q9ULL5 1215 aa11.95□□□□□ -0.5
HMCN1-204ENST00000485744 AGTPBP1Q9UPW5 1226 aa11.95□□□□□ -0.5
HMCN1-204ENST00000485744 BRCA2P51587 3418 aa11.95□□□□□ -0.5
HMCN1-204ENST00000485744 HTTP42858 3142 aa11.95□□□□□ -0.5
HMCN1-204ENST00000485744 RASSF10A6NK89 507 aa11.95□□□□□ -0.5
HMCN1-204ENST00000485744 IGF2BP3O00425 579 aaKnown RBP eCLIP11.95□□□□□ -0.5
HMCN1-204ENST00000485744 CYP2C8P10632 490 aa11.95□□□□□ -0.5
HMCN1-204ENST00000485744 CETPP11597 493 aa11.95□□□□□ -0.5
HMCN1-204ENST00000485744 GJB2P29033 226 aa11.95□□□□□ -0.5
HMCN1-204ENST00000485744 SYDE2Q5VT97 1194 aa11.95□□□□□ -0.5
HMCN1-204ENST00000485744 CATSPERGQ6ZRH7 1159 aa11.95□□□□□ -0.5
HMCN1-204ENST00000485744 HHIPL1Q96JK4 782 aa11.95□□□□□ -0.5
HMCN1-204ENST00000485744 CAPNS2Q96L46 248 aa11.95□□□□□ -0.5
HMCN1-204ENST00000485744 IPO9Q96P70 1041 aaKnown RBP11.95□□□□□ -0.5
HMCN1-204ENST00000485744 PPP1R11O60927 126 aaPredicted RBP11.94□□□□□ -0.5
HMCN1-204ENST00000485744 FMNL1O95466 1100 aaPredicted RBP11.94□□□□□ -0.5
HMCN1-204ENST00000485744 PPP2R5BQ15173 497 aa11.94□□□□□ -0.5
HMCN1-204ENST00000485744 PKN1Q16512 942 aa11.94□□□□□ -0.5
HMCN1-204ENST00000485744 BTNL9Q6UXG8 535 aa11.94□□□□□ -0.5
HMCN1-204ENST00000485744 FASTKD5Q7L8L6 764 aaKnown RBP11.94□□□□□ -0.5
HMCN1-204ENST00000485744 SMARCC2Q8TAQ2 1214 aa11.94□□□□□ -0.5
HMCN1-204ENST00000485744 GPKOWQ92917 476 aaPredicted RBP eCLIP11.94□□□□□ -0.52e-6■■■■■ 39.1
HMCN1-204ENST00000485744 CCDC102AQ96A19 550 aa11.94□□□□□ -0.5
HMCN1-204ENST00000485744 ATG4CQ96DT6 458 aa11.94□□□□□ -0.5
HMCN1-204ENST00000485744 SLF1Q9BQI6 1058 aa11.94□□□□□ -0.5
HMCN1-204ENST00000485744 SPZ1Q9BXG8 430 aa11.94□□□□□ -0.5
HMCN1-204ENST00000485744 ASCC2Q9H1I8 757 aaPredicted RBP11.94□□□□□ -0.5
HMCN1-204ENST00000485744 RIOX1Q9H6W3 641 aa11.94□□□□□ -0.5
HMCN1-204ENST00000485744 FEM1BQ9UK73 627 aa11.94□□□□□ -0.5
HMCN1-204ENST00000485744 A0A0G2JMZ2 1700 aa11.94□□□□□ -0.5
HMCN1-204ENST00000485744 DOCK3Q8IZD9 2030 aa11.94□□□□□ -0.5
HMCN1-204ENST00000485744 SPDYE16A6NNV3 312 aaPredicted RBP11.93□□□□□ -0.5
HMCN1-204ENST00000485744 USP17L15C9J2P7 530 aa11.93□□□□□ -0.5
HMCN1-204ENST00000485744 USP17L13C9JLJ4 530 aa11.93□□□□□ -0.5
HMCN1-204ENST00000485744 USP17L11C9JVI0 530 aa11.93□□□□□ -0.5
HMCN1-204ENST00000485744 USP17L18D6R9N7 530 aa11.93□□□□□ -0.5
HMCN1-204ENST00000485744 USP17L22D6RA61 530 aa11.93□□□□□ -0.5
HMCN1-204ENST00000485744 USP17L17D6RBQ6 530 aa11.93□□□□□ -0.5
HMCN1-204ENST00000485744 USP17L19D6RCP7 530 aa11.93□□□□□ -0.5
HMCN1-204ENST00000485744 USP17L20D6RJB6 530 aa11.93□□□□□ -0.5
HMCN1-204ENST00000485744 PDHXO00330 501 aa11.93□□□□□ -0.5
HMCN1-204ENST00000485744 GNAQP50148 359 aa11.93□□□□□ -0.5
HMCN1-204ENST00000485744 SSRP1Q08945 709 aaKnown RBP11.93□□□□□ -0.5
HMCN1-204ENST00000485744 USP17L24Q0WX57 530 aa11.93□□□□□ -0.5
HMCN1-204ENST00000485744 CDC37Q16543 378 aaPredicted RBP11.93□□□□□ -0.5
HMCN1-204ENST00000485744 CCDC174Q6PII3 467 aa11.93□□□□□ -0.5
HMCN1-204ENST00000485744 SHISA4Q96DD7 197 aa11.93□□□□□ -0.5
HMCN1-204ENST00000485744 P2RX7Q99572 595 aaKnown RBP11.93□□□□□ -0.5
HMCN1-204ENST00000485744 ORC3Q9UBD5 711 aaPredicted RBP11.93□□□□□ -0.5
HMCN1-204ENST00000485744 PPP1R9AQ9ULJ8 1098 aa11.93□□□□□ -0.5
HMCN1-204ENST00000485744 SMC3Q9UQE7 1217 aa11.93□□□□□ -0.5
HMCN1-204ENST00000485744 CDKL5O76039 1030 aa11.93□□□□□ -0.5
HMCN1-204ENST00000485744 HOXA7P31268 230 aaPredicted RBP11.93□□□□□ -0.5
HMCN1-204ENST00000485744 VEGFBP49765 207 aa11.93□□□□□ -0.5
HMCN1-204ENST00000485744 IRX3P78415 501 aaPredicted RBP11.93□□□□□ -0.5
HMCN1-204ENST00000485744 KIF23Q02241 960 aaPredicted RBP11.93□□□□□ -0.5
HMCN1-204ENST00000485744 COG2Q14746 738 aa11.93□□□□□ -0.5
HMCN1-204ENST00000485744 QRICH1Q2TAL8 776 aa11.93□□□□□ -0.5
HMCN1-204ENST00000485744 OTUD7BQ6GQQ9 843 aa11.93□□□□□ -0.5
HMCN1-204ENST00000485744 CPLX2Q6PUV4 134 aaKnown RBP11.93□□□□□ -0.5
HMCN1-204ENST00000485744 PRPF38AQ8NAV1 312 aaKnown RBP11.93□□□□□ -0.5
HMCN1-204ENST00000485744 CHURC1Q8WUH1 139 aa11.93□□□□□ -0.5
HMCN1-204ENST00000485744 INTS4Q96HW7 963 aaKnown RBP11.93□□□□□ -0.5
HMCN1-204ENST00000485744 LLPHQ9BRT6 129 aaKnown RBP11.93□□□□□ -0.5
HMCN1-204ENST00000485744 RNF26Q9BY78 433 aaPredicted RBP11.93□□□□□ -0.5
HMCN1-204ENST00000485744 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.93□□□□□ -0.5
HMCN1-204ENST00000485744 VWA5AO00534 786 aa11.92□□□□□ -0.5
HMCN1-204ENST00000485744 PRPF3O43395 683 aaKnown RBP11.92□□□□□ -0.5
HMCN1-204ENST00000485744 DSG3P32926 999 aa11.92□□□□□ -0.5
HMCN1-204ENST00000485744 C1QTNF8P60827 252 aa11.92□□□□□ -0.5
HMCN1-204ENST00000485744 USH1GQ495M9 461 aa11.92□□□□□ -0.5
HMCN1-204ENST00000485744 TYW1BQ6NUM6 668 aa11.92□□□□□ -0.5
HMCN1-204ENST00000485744 FAM160B2Q86V87 743 aa11.92□□□□□ -0.5
HMCN1-204ENST00000485744 TRIM22Q8IYM9 498 aa11.92□□□□□ -0.5
HMCN1-204ENST00000485744 CPXCR1Q8N123 301 aa11.92□□□□□ -0.5
HMCN1-204ENST00000485744 COA7Q96BR5 231 aa11.92□□□□□ -0.5
HMCN1-204ENST00000485744 MTMR8Q96EF0 704 aa11.92□□□□□ -0.5
HMCN1-204ENST00000485744 RRP36Q96EU6 259 aaKnown RBP11.92□□□□□ -0.5
HMCN1-204ENST00000485744 LZTS2Q9BRK4 669 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms