RNA–Protein interactions for RNA: ENST00000485627.1

CTSA-208, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 695 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-208ENST00000485627 MYSM1Q5VVJ2 828 aa10.97□□□□□ -0.65
CTSA-208ENST00000485627 NOSTRINQ8IVI9 506 aa10.97□□□□□ -0.65
CTSA-208ENST00000485627 FAM177A1Q8N128 213 aaPredicted RBP10.97□□□□□ -0.65
CTSA-208ENST00000485627 CCDC148Q8NFR7 591 aa10.97□□□□□ -0.65
CTSA-208ENST00000485627 UBA5Q9GZZ9 404 aa10.97□□□□□ -0.65
CTSA-208ENST00000485627 GOPCQ9HD26 462 aa10.97□□□□□ -0.65
CTSA-208ENST00000485627 GINM1Q9NU53 330 aa10.97□□□□□ -0.65
CTSA-208ENST00000485627 GGA3Q9NZ52 723 aa10.97□□□□□ -0.65
CTSA-208ENST00000485627 ZBTB21Q9ULJ3 1066 aa10.97□□□□□ -0.65
CTSA-208ENST00000485627 SCAF8Q9UPN6 1271 aaKnown RBP10.97□□□□□ -0.65
CTSA-208ENST00000485627 ELP1O95163 1332 aa10.97□□□□□ -0.65
CTSA-208ENST00000485627 ASTN2O75129 1339 aaPredicted RBP10.96□□□□□ -0.65
CTSA-208ENST00000485627 IQCA1LA6NCM1 817 aa10.96□□□□□ -0.65
CTSA-208ENST00000485627 BTBD18B2RXH4 712 aa10.96□□□□□ -0.65
CTSA-208ENST00000485627 KIF28PB7ZC32 967 aa10.96□□□□□ -0.65
CTSA-208ENST00000485627 F5H6K3 240 aa10.96□□□□□ -0.65
CTSA-208ENST00000485627 hCG_1984214I3L0E3 225 aa10.96□□□□□ -0.65
CTSA-208ENST00000485627 U2AF2P26368 475 aaKnown RBP eCLIP10.96□□□□□ -0.65
CTSA-208ENST00000485627 EPHX2P34913 555 aa10.96□□□□□ -0.65
CTSA-208ENST00000485627 KLRC3Q07444 240 aa10.96□□□□□ -0.65
CTSA-208ENST00000485627 IKQ13123 557 aaPredicted RBP10.96□□□□□ -0.65
CTSA-208ENST00000485627 STK38Q15208 465 aa10.96□□□□□ -0.65
CTSA-208ENST00000485627 SUPT20HL1Q3ZLR7 823 aa10.96□□□□□ -0.65
CTSA-208ENST00000485627 GALNT17Q6IS24 598 aa10.96□□□□□ -0.65
CTSA-208ENST00000485627 CYP4F22Q6NT55 531 aa10.96□□□□□ -0.65
CTSA-208ENST00000485627 HEATR3Q7Z4Q2 680 aa10.96□□□□□ -0.65
CTSA-208ENST00000485627 HOMER1Q86YM7 354 aa10.96□□□□□ -0.65
CTSA-208ENST00000485627 CDAN1Q8IWY9 1227 aa10.96□□□□□ -0.65
CTSA-208ENST00000485627 ZNF713Q8N859 430 aaPredicted RBP10.96□□□□□ -0.65
CTSA-208ENST00000485627 GMCL1P1Q8NEA9 526 aa10.96□□□□□ -0.65
CTSA-208ENST00000485627 LEO1Q8WVC0 666 aaPredicted RBP10.96□□□□□ -0.65
CTSA-208ENST00000485627 SYAP1Q96A49 352 aaPredicted RBP10.96□□□□□ -0.65
CTSA-208ENST00000485627 DCPSQ96C86 337 aaKnown RBP10.96□□□□□ -0.65
CTSA-208ENST00000485627 L3MBTL3Q96JM7 780 aaPredicted RBP10.96□□□□□ -0.65
CTSA-208ENST00000485627 TEPSINQ96N21 525 aa10.96□□□□□ -0.65
CTSA-208ENST00000485627 PHF20Q9BVI0 1012 aa10.96□□□□□ -0.65
CTSA-208ENST00000485627 ZNF341Q9BYN7 854 aa10.96□□□□□ -0.65
CTSA-208ENST00000485627 GZF1Q9H116 711 aaPredicted RBP10.96□□□□□ -0.65
CTSA-208ENST00000485627 RTEL1Q9NZ71 1219 aa10.96□□□□□ -0.65
CTSA-208ENST00000485627 PGAP2Q9UHJ9 254 aa10.96□□□□□ -0.65
CTSA-208ENST00000485627 SIPA1L1O43166 1804 aa10.95□□□□□ -0.66
CTSA-208ENST00000485627 PITPNM2Q9BZ72 1349 aa10.95□□□□□ -0.66
CTSA-208ENST00000485627 CYTH3O43739 400 aa10.95□□□□□ -0.66
CTSA-208ENST00000485627 CTNND1O60716 968 aaKnown RBP10.95□□□□□ -0.66
CTSA-208ENST00000485627 AOC2O75106 756 aa10.95□□□□□ -0.66
CTSA-208ENST00000485627 NAPAP54920 295 aa10.95□□□□□ -0.66
CTSA-208ENST00000485627 MAP2K1Q02750 393 aaPredicted RBP10.95□□□□□ -0.66
CTSA-208ENST00000485627 RRP1BQ14684 758 aaKnown RBP10.95□□□□□ -0.66
CTSA-208ENST00000485627 SHROOM1Q2M3G4 852 aaPredicted RBP10.95□□□□□ -0.66
CTSA-208ENST00000485627 NBPF12Q5TAG4 269 aaPredicted RBP10.95□□□□□ -0.66
CTSA-208ENST00000485627 KCTD1Q719H9 257 aa10.95□□□□□ -0.66
CTSA-208ENST00000485627 HS6ST3Q8IZP7 471 aa10.95□□□□□ -0.66
CTSA-208ENST00000485627 SPDYE1Q8NFV5 336 aaPredicted RBP10.95□□□□□ -0.66
CTSA-208ENST00000485627 KCNG4Q8TDN1 519 aa10.95□□□□□ -0.66
CTSA-208ENST00000485627 USP28Q96RU2 1077 aa10.95□□□□□ -0.66
CTSA-208ENST00000485627 FEZ1Q99689 392 aa10.95□□□□□ -0.66
CTSA-208ENST00000485627 RIOX1Q9H6W3 641 aa10.95□□□□□ -0.66
CTSA-208ENST00000485627 BARHL2Q9NY43 387 aa10.95□□□□□ -0.66
CTSA-208ENST00000485627 RCOR1Q9UKL0 485 aa10.95□□□□□ -0.66
CTSA-208ENST00000485627 NOL7Q9UMY1 257 aaKnown RBP10.95□□□□□ -0.66
CTSA-208ENST00000485627 TRAF5O00463 557 aa10.94□□□□□ -0.66
CTSA-208ENST00000485627 GADD45BO75293 160 aaPredicted RBP10.94□□□□□ -0.66
CTSA-208ENST00000485627 YEATS4O95619 227 aa10.94□□□□□ -0.66
CTSA-208ENST00000485627 NDUFB10O96000 172 aa10.94□□□□□ -0.66
CTSA-208ENST00000485627 BMP3P12645 472 aa10.94□□□□□ -0.66
CTSA-208ENST00000485627 GNA11P29992 359 aa10.94□□□□□ -0.66
CTSA-208ENST00000485627 ME1P48163 572 aa10.94□□□□□ -0.66
CTSA-208ENST00000485627 NUBP1P53384 320 aa10.94□□□□□ -0.66
CTSA-208ENST00000485627 HIRAP54198 1017 aaPredicted RBP10.94□□□□□ -0.66
CTSA-208ENST00000485627 JAG1P78504 1218 aa10.94□□□□□ -0.66
CTSA-208ENST00000485627 RILPL1Q5EBL4 403 aa10.94□□□□□ -0.66
CTSA-208ENST00000485627 ANO1Q5XXA6 986 aa10.94□□□□□ -0.66
CTSA-208ENST00000485627 WWC2Q6AWC2 1192 aa10.94□□□□□ -0.66
CTSA-208ENST00000485627 CAVIN1Q6NZI2 390 aaKnown RBP10.94□□□□□ -0.66
CTSA-208ENST00000485627 RASGRP2Q7LDG7 609 aa10.94□□□□□ -0.66
CTSA-208ENST00000485627 SULF1Q8IWU6 871 aa10.94□□□□□ -0.66
CTSA-208ENST00000485627 ADGRF4Q8IZF3 695 aa10.94□□□□□ -0.66
CTSA-208ENST00000485627 BICD2Q8TD16 824 aa10.94□□□□□ -0.66
CTSA-208ENST00000485627 GPT2Q8TD30 523 aa10.94□□□□□ -0.66
CTSA-208ENST00000485627 GPKOWQ92917 476 aaPredicted RBP eCLIP10.94□□□□□ -0.66
CTSA-208ENST00000485627 RNF25Q96BH1 459 aaPredicted RBP10.94□□□□□ -0.66
CTSA-208ENST00000485627 GMCL1Q96IK5 515 aa10.94□□□□□ -0.66
CTSA-208ENST00000485627 CAPNS2Q96L46 248 aa10.94□□□□□ -0.66
CTSA-208ENST00000485627 PIGSQ96S52 555 aa10.94□□□□□ -0.66
CTSA-208ENST00000485627 MCOLN1Q9GZU1 580 aa10.94□□□□□ -0.66
CTSA-208ENST00000485627 CPVLQ9H3G5 476 aa10.94□□□□□ -0.66
CTSA-208ENST00000485627 C6orf50Q9HD87 102 aa10.94□□□□□ -0.66
CTSA-208ENST00000485627 POLR3EQ9NVU0 708 aa10.94□□□□□ -0.66
CTSA-208ENST00000485627 CEP131Q9UPN4 1083 aa10.94□□□□□ -0.66
CTSA-208ENST00000485627 TMX2Q9Y320 296 aa10.94□□□□□ -0.66
CTSA-208ENST00000485627 PNMA6FA0A0J9YX94 578 aa10.93□□□□□ -0.66
CTSA-208ENST00000485627 PHF20L1A8MW92 1017 aa10.93□□□□□ -0.66
CTSA-208ENST00000485627 STXBP3O00186 592 aa10.93□□□□□ -0.66
CTSA-208ENST00000485627 SPTLC2O15270 562 aa10.93□□□□□ -0.66
CTSA-208ENST00000485627 SLC16A2P36021 539 aa10.93□□□□□ -0.66
CTSA-208ENST00000485627 NR5A1Q13285 461 aa10.93□□□□□ -0.66
CTSA-208ENST00000485627 TTBK2Q6IQ55 1244 aa10.93□□□□□ -0.66
CTSA-208ENST00000485627 USP50Q70EL3 339 aaPredicted RBP10.93□□□□□ -0.66
CTSA-208ENST00000485627 SIAH1Q8IUQ4 282 aa10.93□□□□□ -0.66
CTSA-208ENST00000485627 BLIDQ8IZY5 108 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms