RNA–Protein interactions for RNA: ENST00000485591.1

COL6A2-208, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 3

Gene COL6A2, Length 777 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-208ENST00000485591 NUP133Q8WUM0 1156 aa23.24■■□□□ 1.31
COL6A2-208ENST00000485591 MORF4L1Q9UBU8 362 aa23.24■■□□□ 1.31
COL6A2-208ENST00000485591 MAD2L2Q9UI95 211 aa23.24■■□□□ 1.31
COL6A2-208ENST00000485591 TSKSQ9UJT2 592 aa23.24■■□□□ 1.31
COL6A2-208ENST00000485591 FOXN1O15353 648 aa23.23■■□□□ 1.31
COL6A2-208ENST00000485591 EVCP57679 992 aa23.23■■□□□ 1.31
COL6A2-208ENST00000485591 APOBRQ0VD83 1088 aa23.23■■□□□ 1.31
COL6A2-208ENST00000485591 FAM110CQ1W6H9 321 aa23.23■■□□□ 1.31
COL6A2-208ENST00000485591 SAMD1Q6SPF0 538 aaPredicted RBP23.23■■□□□ 1.31
COL6A2-208ENST00000485591 MICU3Q86XE3 530 aa23.23■■□□□ 1.31
COL6A2-208ENST00000485591 ANKRD13CQ8N6S4 541 aa23.23■■□□□ 1.31
COL6A2-208ENST00000485591 CTCFLQ8NI51 663 aaPredicted RBP23.23■■□□□ 1.31
COL6A2-208ENST00000485591 KIFC2Q96AC6 838 aa23.23■■□□□ 1.31
COL6A2-208ENST00000485591 RBPJLQ9UBG7 517 aa23.23■■□□□ 1.31
COL6A2-208ENST00000485591 RABGAP1Q9Y3P9 1069 aa23.23■■□□□ 1.31
COL6A2-208ENST00000485591 MYH6P13533 1939 aa23.23■■□□□ 1.31
COL6A2-208ENST00000485591 NID2Q14112 1375 aa23.23■■□□□ 1.31
COL6A2-208ENST00000485591 GPR25O00155 361 aa23.22■■□□□ 1.31
COL6A2-208ENST00000485591 VWA5AO00534 786 aa23.22■■□□□ 1.31
COL6A2-208ENST00000485591 ZBTB43O43298 467 aa23.22■■□□□ 1.31
COL6A2-208ENST00000485591 FDX1P10109 184 aa23.22■■□□□ 1.31
COL6A2-208ENST00000485591 KIF5BP33176 963 aa23.22■■□□□ 1.31
COL6A2-208ENST00000485591 NEK4P51957 841 aa23.22■■□□□ 1.31
COL6A2-208ENST00000485591 SYDE2Q5VT97 1194 aa23.22■■□□□ 1.31
COL6A2-208ENST00000485591 STAG2Q8N3U4 1231 aa23.22■■□□□ 1.31
COL6A2-208ENST00000485591 TXNRD2Q9NNW7 524 aa23.22■■□□□ 1.31
COL6A2-208ENST00000485591 PRR12Q9ULL5 1215 aa23.22■■□□□ 1.31
COL6A2-208ENST00000485591 KLRF2D3W0D1 207 aa23.21■■□□□ 1.31
COL6A2-208ENST00000485591 CNMDO75829 334 aa23.21■■□□□ 1.31
COL6A2-208ENST00000485591 HSPA8P11142 646 aaKnown RBP23.21■■□□□ 1.31
COL6A2-208ENST00000485591 RXRAP19793 462 aa23.21■■□□□ 1.31
COL6A2-208ENST00000485591 SLC16A2P36021 539 aa23.21■■□□□ 1.31
COL6A2-208ENST00000485591 RABEP1Q15276 862 aa23.21■■□□□ 1.31
COL6A2-208ENST00000485591 ANKRD1Q15327 319 aa23.21■■□□□ 1.31
COL6A2-208ENST00000485591 REPS2Q8NFH8 660 aa23.21■■□□□ 1.31
COL6A2-208ENST00000485591 PAGR1Q9BTK6 254 aa23.21■■□□□ 1.31
COL6A2-208ENST00000485591 BTBD7Q9P203 1132 aa23.21■■□□□ 1.31
COL6A2-208ENST00000485591 ZSWIM8A7E2V4 1837 aa23.21■■□□□ 1.31
COL6A2-208ENST00000485591 PCNTO95613 3336 aa23.21■■□□□ 1.31
COL6A2-208ENST00000485591 GOLGA8BA8MQT2 603 aa23.2■■□□□ 1.3
COL6A2-208ENST00000485591 CTCFP49711 727 aaPredicted RBP23.2■■□□□ 1.3
COL6A2-208ENST00000485591 AK2P54819 239 aa23.2■■□□□ 1.3
COL6A2-208ENST00000485591 ERVK-9P63128 1117 aa23.2■■□□□ 1.3
COL6A2-208ENST00000485591 ERVK-24P63145 666 aa23.2■■□□□ 1.3
COL6A2-208ENST00000485591 RAB11FIP4Q86YS3 637 aa23.2■■□□□ 1.3
COL6A2-208ENST00000485591 FANCBQ8NB91 859 aa23.2■■□□□ 1.3
COL6A2-208ENST00000485591 IL27Q8NEV9 243 aa23.2■■□□□ 1.3
COL6A2-208ENST00000485591 GPRC5AQ8NFJ5 357 aa23.2■■□□□ 1.3
COL6A2-208ENST00000485591 SLC38A10Q9HBR0 1119 aa23.2■■□□□ 1.3
COL6A2-208ENST00000485591 ZBED4O75132 1171 aa23.19■■□□□ 1.3
COL6A2-208ENST00000485591 SP3Q02447 781 aa23.19■■□□□ 1.3
COL6A2-208ENST00000485591 CCDC144CPQ8IYA2 1237 aa23.19■■□□□ 1.3
COL6A2-208ENST00000485591 UBA5Q9GZZ9 404 aa23.19■■□□□ 1.3
COL6A2-208ENST00000485591 RANBP17Q9H2T7 1088 aaKnown RBP23.19■■□□□ 1.3
COL6A2-208ENST00000485591 CPVLQ9H3G5 476 aa23.19■■□□□ 1.3
COL6A2-208ENST00000485591 GOLGA8AA7E2F4 631 aa23.18■■□□□ 1.3
COL6A2-208ENST00000485591 ATP2A1O14983 1001 aa23.18■■□□□ 1.3
COL6A2-208ENST00000485591 PEX10O60683 326 aa23.18■■□□□ 1.3
COL6A2-208ENST00000485591 FKTNO75072 461 aa23.18■■□□□ 1.3
COL6A2-208ENST00000485591 GNAQP50148 359 aa23.18■■□□□ 1.3
COL6A2-208ENST00000485591 OAZ1P54368 228 aa23.18■■□□□ 1.3
COL6A2-208ENST00000485591 TMEM132BQ14DG7 1078 aa23.18■■□□□ 1.3
COL6A2-208ENST00000485591 ZNF296Q8WUU4 475 aaPredicted RBP23.18■■□□□ 1.3
COL6A2-208ENST00000485591 ZNF274Q96GC6 653 aaPredicted RBP23.18■■□□□ 1.3
COL6A2-208ENST00000485591 LZTS2Q9BRK4 669 aa23.18■■□□□ 1.3
COL6A2-208ENST00000485591 RBM28Q9NW13 759 aaKnown RBP23.18■■□□□ 1.3
COL6A2-208ENST00000485591 ZNF214Q9UL59 606 aaPredicted RBP23.18■■□□□ 1.3
COL6A2-208ENST00000485591 NAP1L2Q9ULW6 460 aaPredicted RBP23.18■■□□□ 1.3
COL6A2-208ENST00000485591 HPS5Q9UPZ3 1129 aa23.18■■□□□ 1.3
COL6A2-208ENST00000485591 CTDP1Q9Y5B0 961 aaPredicted RBP23.18■■□□□ 1.3
COL6A2-208ENST00000485591 SMARCA1P28370 1054 aa23.17■■□□□ 1.3
COL6A2-208ENST00000485591 PDIA3P30101 505 aaKnown RBP23.17■■□□□ 1.3
COL6A2-208ENST00000485591 METAP2P50579 478 aaKnown RBP eCLIP23.17■■□□□ 1.3
COL6A2-208ENST00000485591 PPP2R5BQ15173 497 aa23.17■■□□□ 1.3
COL6A2-208ENST00000485591 RTN1Q16799 776 aa23.17■■□□□ 1.3
COL6A2-208ENST00000485591 ADGRF4Q8IZF3 695 aa23.17■■□□□ 1.3
COL6A2-208ENST00000485591 SPATC1LQ9H0A9 340 aa23.17■■□□□ 1.3
COL6A2-208ENST00000485591 CASP8AP2Q9UKL3 1982 aa23.17■■□□□ 1.3
COL6A2-208ENST00000485591 PLXNB2O15031 1838 aa23.17■■□□□ 1.3
COL6A2-208ENST00000485591 CCNA1P78396 465 aa23.16■■□□□ 1.3
COL6A2-208ENST00000485591 LACTBP83111 547 aaPredicted RBP23.16■■□□□ 1.3
COL6A2-208ENST00000485591 Q3C1V9 767 aa23.16■■□□□ 1.3
COL6A2-208ENST00000485591 TMTC3Q6ZXV5 915 aa23.16■■□□□ 1.3
COL6A2-208ENST00000485591 SPZ1Q9BXG8 430 aa23.16■■□□□ 1.3
COL6A2-208ENST00000485591 TEX13BQ9BXU2 312 aa23.16■■□□□ 1.3
COL6A2-208ENST00000485591 RIOX1Q9H6W3 641 aa23.16■■□□□ 1.3
COL6A2-208ENST00000485591 ZNF536O15090 1300 aa23.15■■□□□ 1.3
COL6A2-208ENST00000485591 CCDC196A0A1B0GTZ2 297 aa23.15■■□□□ 1.3
COL6A2-208ENST00000485591 CYTH3O43739 400 aa23.15■■□□□ 1.3
COL6A2-208ENST00000485591 DHX16O60231 1041 aaKnown RBP23.15■■□□□ 1.3
COL6A2-208ENST00000485591 PLEKHA8P1O95397 391 aa23.15■■□□□ 1.3
COL6A2-208ENST00000485591 PLS1Q14651 629 aa23.15■■□□□ 1.3
COL6A2-208ENST00000485591 SLC35G1Q2M3R5 365 aa23.15■■□□□ 1.3
COL6A2-208ENST00000485591 NBPF11Q86T75 865 aa23.15■■□□□ 1.3
COL6A2-208ENST00000485591 MTMR8Q96EF0 704 aa23.15■■□□□ 1.3
COL6A2-208ENST00000485591 ERO1AQ96HE7 468 aa23.15■■□□□ 1.3
COL6A2-208ENST00000485591 LARP6Q9BRS8 491 aaKnown RBP23.15■■□□□ 1.3
COL6A2-208ENST00000485591 MOV10L1Q9BXT6 1211 aaKnown RBP23.15■■□□□ 1.3
COL6A2-208ENST00000485591 JMJD4Q9H9V9 463 aa23.15■■□□□ 1.3
COL6A2-208ENST00000485591 FAM217BQ9NTX9 383 aaPredicted RBP23.15■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms