RNA–Protein interactions for RNA: ENST00000485122.6

EXOSC1-210, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 564 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-210ENST00000485122 SHCBP1Q8NEM2 672 aa12.5□□□□□ -0.41
EXOSC1-210ENST00000485122 PHOSPHO2Q8TCD6 241 aa12.5□□□□□ -0.41
EXOSC1-210ENST00000485122 PABPC5Q96DU9 382 aaKnown RBP12.5□□□□□ -0.41
EXOSC1-210ENST00000485122 SUCLG2Q96I99 432 aa12.5□□□□□ -0.41
EXOSC1-210ENST00000485122 POP1Q99575 1024 aaKnown RBP12.5□□□□□ -0.41
EXOSC1-210ENST00000485122 CLDND1Q9NY35 253 aa12.5□□□□□ -0.41
EXOSC1-210ENST00000485122 ZHX1Q9UKY1 873 aaPredicted RBP12.5□□□□□ -0.41
EXOSC1-210ENST00000485122 CLSPNQ9HAW4 1339 aa12.5□□□□□ -0.41
EXOSC1-210ENST00000485122 VPS13AQ96RL7 3174 aa12.5□□□□□ -0.41
EXOSC1-210ENST00000485122 USP24Q9UPU5 2620 aa12.49□□□□□ -0.41
EXOSC1-210ENST00000485122 PARP14Q460N5 1801 aa12.49□□□□□ -0.41
EXOSC1-210ENST00000485122 GRIN2DO15399 1336 aa12.49□□□□□ -0.41
EXOSC1-210ENST00000485122 F6X3S4 739 aa12.49□□□□□ -0.41
EXOSC1-210ENST00000485122 BEX3Q00994 111 aa12.49□□□□□ -0.41
EXOSC1-210ENST00000485122 TCEAL5Q5H9L2 206 aa12.49□□□□□ -0.41
EXOSC1-210ENST00000485122 CXCL17Q6UXB2 119 aa12.49□□□□□ -0.41
EXOSC1-210ENST00000485122 PCSK9Q8NBP7 692 aaKnown RBP12.49□□□□□ -0.41
EXOSC1-210ENST00000485122 ACER1Q8TDN7 264 aa12.49□□□□□ -0.41
EXOSC1-210ENST00000485122 ZNF384Q8TF68 577 aa12.49□□□□□ -0.41
EXOSC1-210ENST00000485122 KAZALD1Q96I82 304 aa12.49□□□□□ -0.41
EXOSC1-210ENST00000485122 CNPY2Q9Y2B0 182 aa12.49□□□□□ -0.41
EXOSC1-210ENST00000485122 GPR75-ASB3A0A0A6YYF3 556 aa12.48□□□□□ -0.41
EXOSC1-210ENST00000485122 STXBP3O00186 592 aa12.48□□□□□ -0.41
EXOSC1-210ENST00000485122 GRM8O00222 908 aa12.48□□□□□ -0.41
EXOSC1-210ENST00000485122 CTAGE5O15320 804 aa12.48□□□□□ -0.41
EXOSC1-210ENST00000485122 MBTPS2O43462 519 aa12.48□□□□□ -0.41
EXOSC1-210ENST00000485122 DUSP11O75319 330 aaKnown RBP12.48□□□□□ -0.41
EXOSC1-210ENST00000485122 NPM3O75607 178 aaKnown RBP12.48□□□□□ -0.41
EXOSC1-210ENST00000485122 GH2P01242 217 aa12.48□□□□□ -0.41
EXOSC1-210ENST00000485122 PFKMP08237 780 aa12.48□□□□□ -0.41
EXOSC1-210ENST00000485122 CYP2C9P11712 490 aa12.48□□□□□ -0.41
EXOSC1-210ENST00000485122 ACTN1P12814 892 aa12.48□□□□□ -0.41
EXOSC1-210ENST00000485122 LTBRP36941 435 aa12.48□□□□□ -0.41
EXOSC1-210ENST00000485122 ERVK-21P61565 698 aa12.48□□□□□ -0.41
EXOSC1-210ENST00000485122 DLX2Q07687 328 aaPredicted RBP12.48□□□□□ -0.41
EXOSC1-210ENST00000485122 SIGLEC14Q08ET2 396 aa12.48□□□□□ -0.41
EXOSC1-210ENST00000485122 GNASQ5JWF2 1037 aa12.48□□□□□ -0.41
EXOSC1-210ENST00000485122 ABRAQ8N0Z2 381 aa12.48□□□□□ -0.41
EXOSC1-210ENST00000485122 SLC43A3Q8NBI5 491 aa12.48□□□□□ -0.41
EXOSC1-210ENST00000485122 TGS1Q96RS0 853 aaKnown RBP12.48□□□□□ -0.41
EXOSC1-210ENST00000485122 IFT57Q9NWB7 429 aa12.48□□□□□ -0.41
EXOSC1-210ENST00000485122 ABCF2Q9UG63 623 aa12.48□□□□□ -0.41
EXOSC1-210ENST00000485122 FAM184BQ9ULE4 1060 aa12.48□□□□□ -0.41
EXOSC1-210ENST00000485122 FASNP49327 2511 aaKnown RBP12.47□□□□□ -0.41
EXOSC1-210ENST00000485122 SPTBN2O15020 2390 aa12.47□□□□□ -0.41
EXOSC1-210ENST00000485122 LINC01553A4QN01 128 aa12.47□□□□□ -0.41
EXOSC1-210ENST00000485122 FCER1AP12319 257 aa12.47□□□□□ -0.41
EXOSC1-210ENST00000485122 PHKA1P46020 1223 aa12.47□□□□□ -0.41
EXOSC1-210ENST00000485122 MKRN4PQ13434 485 aaPredicted RBP12.47□□□□□ -0.41
EXOSC1-210ENST00000485122 ZNF792Q3KQV3 632 aa12.47□□□□□ -0.41
EXOSC1-210ENST00000485122 BEND3Q5T5X7 828 aa12.47□□□□□ -0.41
EXOSC1-210ENST00000485122 RPAINQ86UA6 219 aa12.47□□□□□ -0.41
EXOSC1-210ENST00000485122 C17orf80Q9BSJ5 609 aa12.47□□□□□ -0.41
EXOSC1-210ENST00000485122 UPF3AQ9H1J1 476 aaKnown RBP12.47□□□□□ -0.41
EXOSC1-210ENST00000485122 FOCADQ5VW36 1801 aa12.46□□□□□ -0.41
EXOSC1-210ENST00000485122 MYO7AQ13402 2215 aa12.46□□□□□ -0.41
EXOSC1-210ENST00000485122 SNAI1O95863 264 aaPredicted RBP12.46□□□□□ -0.41
EXOSC1-210ENST00000485122 PTGS1P23219 599 aa12.46□□□□□ -0.41
EXOSC1-210ENST00000485122 PSMC6P62333 389 aa12.46□□□□□ -0.41
EXOSC1-210ENST00000485122 DEFB103AP81534 67 aa12.46□□□□□ -0.41
EXOSC1-210ENST00000485122 ITGA7Q13683 1181 aa12.46□□□□□ -0.41
EXOSC1-210ENST00000485122 COL19A1Q14993 1142 aa12.46□□□□□ -0.41
EXOSC1-210ENST00000485122 BANK1Q8NDB2 785 aa12.46□□□□□ -0.41
EXOSC1-210ENST00000485122 MRPL38Q96DV4 380 aaKnown RBP12.46□□□□□ -0.41
EXOSC1-210ENST00000485122 FAM163AQ96GL9 167 aaPredicted RBP12.46□□□□□ -0.41
EXOSC1-210ENST00000485122 MMP19Q99542 508 aa12.46□□□□□ -0.41
EXOSC1-210ENST00000485122 MROH8Q9H579 483 aa12.46□□□□□ -0.41
EXOSC1-210ENST00000485122 PI4KBQ9UBF8 816 aa12.46□□□□□ -0.41
EXOSC1-210ENST00000485122 GJA9P57773 515 aa12.45□□□□□ -0.42
EXOSC1-210ENST00000485122 GNAI1P63096 354 aa12.45□□□□□ -0.42
EXOSC1-210ENST00000485122 MECOMQ03112 1051 aa12.45□□□□□ -0.42
EXOSC1-210ENST00000485122 MCTP2Q6DN12 878 aa12.45□□□□□ -0.42
EXOSC1-210ENST00000485122 CRACR2BQ8N4Y2 399 aaPredicted RBP12.45□□□□□ -0.42
EXOSC1-210ENST00000485122 TMEM105Q8N8V8 129 aa12.45□□□□□ -0.42
EXOSC1-210ENST00000485122 FBXO22Q8NEZ5 403 aa12.45□□□□□ -0.42
EXOSC1-210ENST00000485122 ZBED2Q9BTP6 218 aa12.45□□□□□ -0.42
EXOSC1-210ENST00000485122 DLL3Q9NYJ7 618 aa12.45□□□□□ -0.42
EXOSC1-210ENST00000485122 EP300Q09472 2414 aaPredicted RBP12.45□□□□□ -0.42
EXOSC1-210ENST00000485122 FAM208BQ5VWN6 2430 aa12.45□□□□□ -0.42
EXOSC1-210ENST00000485122 WDR5P61964 334 aaKnown RBP12.44□□□□□ -0.42
EXOSC1-210ENST00000485122 TIGD5Q53EQ6 642 aa12.44□□□□□ -0.42
EXOSC1-210ENST00000485122 SLF2Q8IX21 1173 aa12.44□□□□□ -0.42
EXOSC1-210ENST00000485122 TEX11Q8IYF3 940 aa12.44□□□□□ -0.42
EXOSC1-210ENST00000485122 LPIN2Q92539 896 aa12.44□□□□□ -0.42
EXOSC1-210ENST00000485122 ATG4CQ96DT6 458 aa12.44□□□□□ -0.42
EXOSC1-210ENST00000485122 FTOQ9C0B1 505 aaKnown RBP eCLIP12.44□□□□□ -0.42
EXOSC1-210ENST00000485122 TANGO6Q9C0B7 1094 aa12.44□□□□□ -0.42
EXOSC1-210ENST00000485122 KIAA1683Q9H0B3 1180 aa12.44□□□□□ -0.42
EXOSC1-210ENST00000485122 TRMT13Q9NUP7 481 aaKnown RBP12.44□□□□□ -0.42
EXOSC1-210ENST00000485122 DENND2AQ9ULE3 1009 aa12.44□□□□□ -0.42
EXOSC1-210ENST00000485122 CEP250Q9BV73 2442 aa12.44□□□□□ -0.42
EXOSC1-210ENST00000485122 GPR179Q6PRD1 2367 aa12.44□□□□□ -0.42
EXOSC1-210ENST00000485122 ASTN1O14525 1302 aa12.43□□□□□ -0.42
EXOSC1-210ENST00000485122 NLRC5Q86WI3 1866 aa12.43□□□□□ -0.42
EXOSC1-210ENST00000485122 TBX10O75333 385 aa12.43□□□□□ -0.42
EXOSC1-210ENST00000485122 KCNJ6P48051 423 aa12.43□□□□□ -0.42
EXOSC1-210ENST00000485122 USP14P54578 494 aa12.43□□□□□ -0.42
EXOSC1-210ENST00000485122 RAB3GAP1Q15042 981 aa12.43□□□□□ -0.42
EXOSC1-210ENST00000485122 FAM117BQ6P1L5 589 aa12.43□□□□□ -0.42
EXOSC1-210ENST00000485122 SH3RF3Q8TEJ3 882 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms