RNA–Protein interactions for RNA: ENST00000485102.1

HDAC6-227, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-227ENST00000485102 MOXD2PA6NHM9 499 aa15.61■□□□□ 0.09
HDAC6-227ENST00000485102 PGK1P00558 417 aa15.61■□□□□ 0.09
HDAC6-227ENST00000485102 MYCNP04198 464 aaPredicted RBP15.61■□□□□ 0.09
HDAC6-227ENST00000485102 CHGBP05060 677 aa15.61■□□□□ 0.09
HDAC6-227ENST00000485102 ITGB8P26012 769 aa15.61■□□□□ 0.09
HDAC6-227ENST00000485102 FAM83BQ5T0W9 1011 aa15.61■□□□□ 0.09
HDAC6-227ENST00000485102 CCSAPQ6IQ19 270 aaPredicted RBP15.61■□□□□ 0.09
HDAC6-227ENST00000485102 PRPF38AQ8NAV1 312 aaKnown RBP15.61■□□□□ 0.09
HDAC6-227ENST00000485102 SLF1Q9BQI6 1058 aa15.61■□□□□ 0.09
HDAC6-227ENST00000485102 TTYH1Q9H313 450 aaPredicted RBP15.61■□□□□ 0.09
HDAC6-227ENST00000485102 COG6Q9Y2V7 657 aa15.61■□□□□ 0.09
HDAC6-227ENST00000485102 GSG1L2A8MUP6 293 aa15.6■□□□□ 0.09
HDAC6-227ENST00000485102 RASA1P20936 1047 aa15.6■□□□□ 0.09
HDAC6-227ENST00000485102 SAMD1Q6SPF0 538 aaPredicted RBP15.6■□□□□ 0.09
HDAC6-227ENST00000485102 NUP133Q8WUM0 1156 aa15.6■□□□□ 0.09
HDAC6-227ENST00000485102 MKL1Q969V6 931 aa15.6■□□□□ 0.09
HDAC6-227ENST00000485102 LRRCC1Q9C099 1032 aa15.6■□□□□ 0.09
HDAC6-227ENST00000485102 FAM184BQ9ULE4 1060 aa15.6■□□□□ 0.09
HDAC6-227ENST00000485102 MYO9BQ13459 2157 aa15.6■□□□□ 0.09
HDAC6-227ENST00000485102 IGKV6D-41A0A0C4DH26 115 aa15.59■□□□□ 0.09
HDAC6-227ENST00000485102 F5H6K3 240 aa15.59■□□□□ 0.09
HDAC6-227ENST00000485102 DUSP11O75319 330 aaKnown RBP15.59■□□□□ 0.09
HDAC6-227ENST00000485102 SNAI1O95863 264 aaPredicted RBP15.59■□□□□ 0.09
HDAC6-227ENST00000485102 RAG1P15918 1043 aa15.59■□□□□ 0.09
HDAC6-227ENST00000485102 CST5P28325 142 aaPredicted RBP15.59■□□□□ 0.09
HDAC6-227ENST00000485102 ACLYP53396 1101 aa15.59■□□□□ 0.09
HDAC6-227ENST00000485102 KLRC3Q07444 240 aa15.59■□□□□ 0.09
HDAC6-227ENST00000485102 FAAP100Q0VG06 881 aa15.59■□□□□ 0.09
HDAC6-227ENST00000485102 MAFAQ8NHW3 353 aaPredicted RBP15.59■□□□□ 0.09
HDAC6-227ENST00000485102 ELP1O95163 1332 aa15.59■□□□□ 0.09
HDAC6-227ENST00000485102 DCDC2CA8MYV0 355 aa15.58■□□□□ 0.08
HDAC6-227ENST00000485102 NDUFB10O96000 172 aa15.58■□□□□ 0.08
HDAC6-227ENST00000485102 EPHB4P54760 987 aa15.58■□□□□ 0.08
HDAC6-227ENST00000485102 NKX3-2P78367 333 aa15.58■□□□□ 0.08
HDAC6-227ENST00000485102 FPGSQ05932 587 aa15.58■□□□□ 0.08
HDAC6-227ENST00000485102 SNRNP48Q6IEG0 339 aaKnown RBP15.58■□□□□ 0.08
HDAC6-227ENST00000485102 KBTBD3Q8NAB2 608 aa15.58■□□□□ 0.08
HDAC6-227ENST00000485102 DDX11Q96FC9 970 aa15.58■□□□□ 0.08
HDAC6-227ENST00000485102 MKNK2Q9HBH9 465 aa15.58■□□□□ 0.08
HDAC6-227ENST00000485102 ZNF287Q9HBT7 754 aa15.58■□□□□ 0.08
HDAC6-227ENST00000485102 STARD7Q9NQZ5 370 aa15.58■□□□□ 0.08
HDAC6-227ENST00000485102 TMEM39AQ9NV64 488 aa15.58■□□□□ 0.08
HDAC6-227ENST00000485102 RIPK3Q9Y572 518 aa15.58■□□□□ 0.08
HDAC6-227ENST00000485102 SYNRGQ9UMZ2 1314 aa15.58■□□□□ 0.08
HDAC6-227ENST00000485102 SPTBN5Q9NRC6 3674 aaKnown RBP15.57■□□□□ 0.08
HDAC6-227ENST00000485102 HSFX4A0A1B0GTS1 333 aaPredicted RBP15.57■□□□□ 0.08
HDAC6-227ENST00000485102 HSFX3A0A1B0GWH4 333 aaPredicted RBP15.57■□□□□ 0.08
HDAC6-227ENST00000485102 PQBP1O60828 265 aaKnown RBP15.57■□□□□ 0.08
HDAC6-227ENST00000485102 FDX1P10109 184 aa15.57■□□□□ 0.08
HDAC6-227ENST00000485102 CDK7P50613 346 aa15.57■□□□□ 0.08
HDAC6-227ENST00000485102 OAZ1P54368 228 aa15.57■□□□□ 0.08
HDAC6-227ENST00000485102 APPBP2Q92624 585 aa15.57■□□□□ 0.08
HDAC6-227ENST00000485102 RNPC3Q96LT9 517 aaKnown RBP15.57■□□□□ 0.08
HDAC6-227ENST00000485102 ABHD16BQ9H3Z7 469 aa15.57■□□□□ 0.08
HDAC6-227ENST00000485102 SLC38A10Q9HBR0 1119 aa15.57■□□□□ 0.08
HDAC6-227ENST00000485102 ECHDC1Q9NTX5 307 aa15.57■□□□□ 0.08
HDAC6-227ENST00000485102 FBXO40Q9UH90 709 aa15.57■□□□□ 0.08
HDAC6-227ENST00000485102 TBX21Q9UL17 535 aa15.57■□□□□ 0.08
HDAC6-227ENST00000485102 MROH7Q68CQ1 1323 aa15.57■□□□□ 0.08
HDAC6-227ENST00000485102 ZBED4O75132 1171 aa15.56■□□□□ 0.08
HDAC6-227ENST00000485102 TIMP1P01033 207 aa15.56■□□□□ 0.08
HDAC6-227ENST00000485102 ZFYP08048 801 aaPredicted RBP15.56■□□□□ 0.08
HDAC6-227ENST00000485102 GNAT2P19087 354 aa15.56■□□□□ 0.08
HDAC6-227ENST00000485102 ACVR2BQ13705 512 aa15.56■□□□□ 0.08
HDAC6-227ENST00000485102 KCNA10Q16322 511 aa15.56■□□□□ 0.08
HDAC6-227ENST00000485102 PCSK9Q8NBP7 692 aaKnown RBP15.56■□□□□ 0.08
HDAC6-227ENST00000485102 CHST13Q8NET6 341 aa15.56■□□□□ 0.08
HDAC6-227ENST00000485102 MYLIPQ8WY64 445 aa15.56■□□□□ 0.08
HDAC6-227ENST00000485102 OSBP2Q969R2 916 aa15.56■□□□□ 0.08
HDAC6-227ENST00000485102 NUP88Q99567 741 aaPredicted RBP15.56■□□□□ 0.08
HDAC6-227ENST00000485102 UPF3AQ9H1J1 476 aaKnown RBP15.56■□□□□ 0.08
HDAC6-227ENST00000485102 FEM1BQ9UK73 627 aa15.56■□□□□ 0.08
HDAC6-227ENST00000485102 RNF113AO15541 343 aaKnown RBP15.55■□□□□ 0.08
HDAC6-227ENST00000485102 RAD21O60216 631 aa15.55■□□□□ 0.08
HDAC6-227ENST00000485102 GJA9P57773 515 aa15.55■□□□□ 0.08
HDAC6-227ENST00000485102 MFSD5Q6N075 450 aa15.55■□□□□ 0.08
HDAC6-227ENST00000485102 ZNF444Q8N0Y2 327 aaPredicted RBP15.55■□□□□ 0.08
HDAC6-227ENST00000485102 GMCL1P1Q8NEA9 526 aa15.55■□□□□ 0.08
HDAC6-227ENST00000485102 LENG1Q96BZ8 264 aaPredicted RBP15.55■□□□□ 0.08
HDAC6-227ENST00000485102 FGD4Q96M96 766 aa15.55■□□□□ 0.08
HDAC6-227ENST00000485102 GLT1D1Q96MS3 346 aa15.55■□□□□ 0.08
HDAC6-227ENST00000485102 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.55■□□□□ 0.08
HDAC6-227ENST00000485102 MTMR4Q9NYA4 1195 aa15.55■□□□□ 0.08
HDAC6-227ENST00000485102 CLIP2Q9UDT6 1046 aa15.55■□□□□ 0.08
HDAC6-227ENST00000485102 NCOR1O75376 2440 aa15.55■□□□□ 0.08
HDAC6-227ENST00000485102 MCM3APO60318 1980 aa15.55■□□□□ 0.08
HDAC6-227ENST00000485102 MYH4Q9Y623 1939 aa15.55■□□□□ 0.08
HDAC6-227ENST00000485102 MINDY4BA8MYZ0 360 aa15.54■□□□□ 0.08
HDAC6-227ENST00000485102 TTLL1O95922 423 aa15.54■□□□□ 0.08
HDAC6-227ENST00000485102 RASIP1Q5U651 963 aa15.54■□□□□ 0.08
HDAC6-227ENST00000485102 CPXCR1Q8N123 301 aa15.54■□□□□ 0.08
HDAC6-227ENST00000485102 CEP95Q96GE4 821 aa15.54■□□□□ 0.08
HDAC6-227ENST00000485102 KATNBL1Q9H079 304 aa15.54■□□□□ 0.08
HDAC6-227ENST00000485102 BCL11AQ9H165 835 aa15.54■□□□□ 0.08
HDAC6-227ENST00000485102 DCTPP1Q9H773 170 aa15.54■□□□□ 0.08
HDAC6-227ENST00000485102 SPC25Q9HBM1 224 aa15.54■□□□□ 0.08
HDAC6-227ENST00000485102 PLIN4Q96Q06 1357 aa15.53■□□□□ 0.08
HDAC6-227ENST00000485102 PATL2C9JE40 543 aaKnown RBP15.53■□□□□ 0.08
HDAC6-227ENST00000485102 GPAA1O43292 621 aa15.53■□□□□ 0.08
HDAC6-227ENST00000485102 ASGR1P07306 291 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms