RNA–Protein interactions for RNA: ENST00000484596.1

UBR3-210, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 2

Gene UBR3, Length 791 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-210ENST00000484596 SLC9A7Q96T83 725 aa10.14□□□□□ -0.79
UBR3-210ENST00000484596 TRIM55Q9BYV6 548 aa10.14□□□□□ -0.79
UBR3-210ENST00000484596 KCNK12Q9HB15 430 aa10.14□□□□□ -0.79
UBR3-210ENST00000484596 A0A1W2PQH9 124 aa10.13□□□□□ -0.79
UBR3-210ENST00000484596 U2SURPO15042 1029 aaKnown RBP10.13□□□□□ -0.79
UBR3-210ENST00000484596 UNC5AQ6ZN44 842 aa10.13□□□□□ -0.79
UBR3-210ENST00000484596 SYDE1Q6ZW31 735 aaPredicted RBP10.13□□□□□ -0.79
UBR3-210ENST00000484596 TMC3Q7Z5M5 1100 aa10.13□□□□□ -0.79
UBR3-210ENST00000484596 OXR1Q8N573 874 aa10.13□□□□□ -0.79
UBR3-210ENST00000484596 BHLHE22Q8NFJ8 381 aaPredicted RBP10.13□□□□□ -0.79
UBR3-210ENST00000484596 SYTL5Q8TDW5 730 aaPredicted RBP10.13□□□□□ -0.79
UBR3-210ENST00000484596 SYTL4Q96C24 671 aaPredicted RBP10.13□□□□□ -0.79
UBR3-210ENST00000484596 HDAC8Q9BY41 377 aa10.13□□□□□ -0.79
UBR3-210ENST00000484596 RNF32Q9H0A6 362 aa10.13□□□□□ -0.79
UBR3-210ENST00000484596 PHAXQ9H814 394 aaKnown RBP10.13□□□□□ -0.79
UBR3-210ENST00000484596 EBF1Q9UH73 591 aa10.13□□□□□ -0.79
UBR3-210ENST00000484596 LOC105371045A0A1W2PR82 267 aa10.12□□□□□ -0.79
UBR3-210ENST00000484596 ACRP10323 421 aa10.12□□□□□ -0.79
UBR3-210ENST00000484596 SNW1Q13573 536 aaKnown RBP10.12□□□□□ -0.79
UBR3-210ENST00000484596 TIGD5Q53EQ6 642 aa10.12□□□□□ -0.79
UBR3-210ENST00000484596 USHBP1Q8N6Y0 703 aa10.12□□□□□ -0.79
UBR3-210ENST00000484596 ZNF512BQ96KM6 892 aaPredicted RBP10.12□□□□□ -0.79
UBR3-210ENST00000484596 DNAJC2Q99543 621 aaKnown RBP10.12□□□□□ -0.79
UBR3-210ENST00000484596 ZNF281Q9Y2X9 895 aa10.12□□□□□ -0.79
UBR3-210ENST00000484596 KLF4O43474 513 aa10.11□□□□□ -0.79
UBR3-210ENST00000484596 CLEC3AO75596 197 aa10.11□□□□□ -0.79
UBR3-210ENST00000484596 RAB33AQ14088 237 aa10.11□□□□□ -0.79
UBR3-210ENST00000484596 FXNQ16595 210 aa10.11□□□□□ -0.79
UBR3-210ENST00000484596 BBS9Q3SYG4 887 aa10.11□□□□□ -0.79
UBR3-210ENST00000484596 DAGLBQ8NCG7 672 aa10.11□□□□□ -0.79
UBR3-210ENST00000484596 FITM1A5D6W6 292 aa10.1□□□□□ -0.79
UBR3-210ENST00000484596 TMEM192Q8IY95 271 aa10.1□□□□□ -0.79
UBR3-210ENST00000484596 LILRA2Q8N149 483 aa10.1□□□□□ -0.79
UBR3-210ENST00000484596 FBXO15Q8NCQ5 510 aaPredicted RBP10.1□□□□□ -0.79
UBR3-210ENST00000484596 HNRNPLLQ8WVV9 542 aaKnown RBP10.1□□□□□ -0.79
UBR3-210ENST00000484596 TCTN2Q96GX1 697 aa10.1□□□□□ -0.79
UBR3-210ENST00000484596 PPP1R16BQ96T49 567 aa10.1□□□□□ -0.79
UBR3-210ENST00000484596 DCP1AQ9NPI6 582 aaPredicted RBP10.1□□□□□ -0.79
UBR3-210ENST00000484596 SIRPGQ9P1W8 387 aa10.1□□□□□ -0.79
UBR3-210ENST00000484596 RAP1GAPP47736 663 aa10.09□□□□□ -0.79
UBR3-210ENST00000484596 NR0B2Q15466 257 aa10.09□□□□□ -0.79
UBR3-210ENST00000484596 RNF111Q6ZNA4 994 aa10.09□□□□□ -0.79
UBR3-210ENST00000484596 ZNF655Q8N720 491 aaPredicted RBP10.09□□□□□ -0.79
UBR3-210ENST00000484596 PMFBP1Q8TBY8 1022 aa10.09□□□□□ -0.79
UBR3-210ENST00000484596 LINC01599Q8WXQ3 324 aa10.09□□□□□ -0.79
UBR3-210ENST00000484596 SMARCC1Q92922 1105 aaPredicted RBP10.09□□□□□ -0.79
UBR3-210ENST00000484596 PRDM14Q9GZV8 571 aa10.09□□□□□ -0.79
UBR3-210ENST00000484596 EPB41L4BQ9H329 900 aa10.09□□□□□ -0.79
UBR3-210ENST00000484596 TSPAN15O95858 294 aa10.08□□□□□ -0.8
UBR3-210ENST00000484596 PMS1P54277 932 aaKnown RBP10.08□□□□□ -0.8
UBR3-210ENST00000484596 DUSP4Q13115 394 aa10.08□□□□□ -0.8
UBR3-210ENST00000484596 SPPL2CQ8IUH8 684 aa10.08□□□□□ -0.8
UBR3-210ENST00000484596 SLC6A18Q96N87 628 aa10.08□□□□□ -0.8
UBR3-210ENST00000484596 G6PC3Q9BUM1 346 aa10.08□□□□□ -0.8
UBR3-210ENST00000484596 FOXP3Q9BZS1 431 aa10.08□□□□□ -0.8
UBR3-210ENST00000484596 SUCOQ9UBS9 1254 aaKnown RBP10.08□□□□□ -0.8
UBR3-210ENST00000484596 SHROOM4Q9ULL8 1493 aa10.08□□□□□ -0.8
UBR3-210ENST00000484596 KRTAP4-8A0A0G2JLE6 195 aa10.07□□□□□ -0.8
UBR3-210ENST00000484596 PRAMEF1O95521 474 aa10.07□□□□□ -0.8
UBR3-210ENST00000484596 KRT1P04264 644 aa10.07□□□□□ -0.8
UBR3-210ENST00000484596 RPL10P27635 214 aaKnown RBP10.07□□□□□ -0.8
UBR3-210ENST00000484596 ZYXQ15942 572 aaKnown RBP10.07□□□□□ -0.8
UBR3-210ENST00000484596 LARP1BQ659C4 914 aaKnown RBP10.07□□□□□ -0.8
UBR3-210ENST00000484596 CILP2Q8IUL8 1156 aa10.07□□□□□ -0.8
UBR3-210ENST00000484596 TCFL5Q9UL49 500 aa10.07□□□□□ -0.8
UBR3-210ENST00000484596 ZNF214Q9UL59 606 aaPredicted RBP10.07□□□□□ -0.8
UBR3-210ENST00000484596 CHRNEQ04844 493 aa10.06□□□□□ -0.8
UBR3-210ENST00000484596 NCAPHQ15003 741 aa10.06□□□□□ -0.8
UBR3-210ENST00000484596 ANKS4BQ8N8V4 417 aa10.06□□□□□ -0.8
UBR3-210ENST00000484596 MKL1Q969V6 931 aa10.06□□□□□ -0.8
UBR3-210ENST00000484596 MINPP1Q9UNW1 487 aa10.06□□□□□ -0.8
UBR3-210ENST00000484596 ARID1BQ8NFD5 2236 aaPredicted RBP10.06□□□□□ -0.8
UBR3-210ENST00000484596 LTBP3Q9NS15 1303 aa10.06□□□□□ -0.8
UBR3-210ENST00000484596 SSU72P8A0A1W2PR75 194 aa10.05□□□□□ -0.8
UBR3-210ENST00000484596 FAM86C2PA6NEL3 165 aa10.05□□□□□ -0.8
UBR3-210ENST00000484596 SIGLEC6O43699 453 aa10.05□□□□□ -0.8
UBR3-210ENST00000484596 C1QTNF9P0C862 333 aa10.05□□□□□ -0.8
UBR3-210ENST00000484596 PCBP3P57721 371 aaKnown RBP10.05□□□□□ -0.8
UBR3-210ENST00000484596 SLC7A5Q01650 507 aa10.05□□□□□ -0.8
UBR3-210ENST00000484596 GNPTABQ3T906 1256 aa10.05□□□□□ -0.8
UBR3-210ENST00000484596 VHLLQ6RSH7 139 aa10.05□□□□□ -0.8
UBR3-210ENST00000484596 WAPLQ7Z5K2 1190 aa10.05□□□□□ -0.8
UBR3-210ENST00000484596 LINC00116Q8NCU8 138 aa10.05□□□□□ -0.8
UBR3-210ENST00000484596 LNPKQ9C0E8 428 aa10.05□□□□□ -0.8
UBR3-210ENST00000484596 MKRN2Q9H000 416 aaKnown RBP10.05□□□□□ -0.8
UBR3-210ENST00000484596 OSBPL2Q9H1P3 480 aa10.05□□□□□ -0.8
UBR3-210ENST00000484596 CWC22Q9HCG8 908 aaKnown RBP10.05□□□□□ -0.8
UBR3-210ENST00000484596 GPR160Q9UJ42 338 aa10.05□□□□□ -0.8
UBR3-210ENST00000484596 TMEM82A0PJX8 343 aa10.04□□□□□ -0.8
UBR3-210ENST00000484596 PSPNO60542 156 aa10.04□□□□□ -0.8
UBR3-210ENST00000484596 DDAH1O94760 285 aa10.04□□□□□ -0.8
UBR3-210ENST00000484596 SYPP08247 313 aa10.04□□□□□ -0.8
UBR3-210ENST00000484596 NFE2L2Q16236 605 aa10.04□□□□□ -0.8
UBR3-210ENST00000484596 DDR2Q16832 855 aa10.04□□□□□ -0.8
UBR3-210ENST00000484596 LRP10Q7Z4F1 713 aa10.04□□□□□ -0.8
UBR3-210ENST00000484596 SLC6A17Q9H1V8 727 aa10.04□□□□□ -0.8
UBR3-210ENST00000484596 ZMYM5Q9UJ78 669 aa10.04□□□□□ -0.8
UBR3-210ENST00000484596 YBX2Q9Y2T7 364 aaKnown RBP10.04□□□□□ -0.8
UBR3-210ENST00000484596 NOTOA8MTQ0 251 aa10.03□□□□□ -0.8
UBR3-210ENST00000484596 GALK1P51570 392 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms