RNA–Protein interactions for RNA: ENST00000484566.5

DDX39B-221, Transcript of DExD-box helicase 39B, humanhuman

TSL 5

Gene DDX39B, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-221ENST00000484566 USP17L13C9JLJ4 530 aa10.44□□□□□ -0.74
DDX39B-221ENST00000484566 USP17L11C9JVI0 530 aa10.44□□□□□ -0.74
DDX39B-221ENST00000484566 USP17L18D6R9N7 530 aa10.44□□□□□ -0.74
DDX39B-221ENST00000484566 USP17L22D6RA61 530 aa10.44□□□□□ -0.74
DDX39B-221ENST00000484566 USP17L17D6RBQ6 530 aa10.44□□□□□ -0.74
DDX39B-221ENST00000484566 USP17L19D6RCP7 530 aa10.44□□□□□ -0.74
DDX39B-221ENST00000484566 USP17L20D6RJB6 530 aa10.44□□□□□ -0.74
DDX39B-221ENST00000484566 KDM4AO75164 1064 aa10.44□□□□□ -0.74
DDX39B-221ENST00000484566 HOXC6P09630 235 aa10.44□□□□□ -0.74
DDX39B-221ENST00000484566 CYBAP13498 195 aa10.44□□□□□ -0.74
DDX39B-221ENST00000484566 CYP2C19P33261 490 aa10.44□□□□□ -0.74
DDX39B-221ENST00000484566 USP46P62068 366 aa10.44□□□□□ -0.74
DDX39B-221ENST00000484566 USP17L24Q0WX57 530 aa10.44□□□□□ -0.74
DDX39B-221ENST00000484566 GRB14Q14449 540 aa10.44□□□□□ -0.74
DDX39B-221ENST00000484566 ZYXQ15942 572 aaKnown RBP10.44□□□□□ -0.74
DDX39B-221ENST00000484566 TRIM60Q495X7 471 aa10.44□□□□□ -0.74
DDX39B-221ENST00000484566 PI16Q6UXB8 463 aa10.44□□□□□ -0.74
DDX39B-221ENST00000484566 TBC1D9Q6ZT07 1266 aa10.44□□□□□ -0.74
DDX39B-221ENST00000484566 FOXP4Q8IVH2 680 aaPredicted RBP10.44□□□□□ -0.74
DDX39B-221ENST00000484566 MAPKAPK5Q8IW41 473 aa10.44□□□□□ -0.74
DDX39B-221ENST00000484566 C12orf42Q96LP6 360 aa10.44□□□□□ -0.74
DDX39B-221ENST00000484566 NEUROD6Q96NK8 337 aa10.44□□□□□ -0.74
DDX39B-221ENST00000484566 DNAJC18Q9H819 358 aa10.44□□□□□ -0.74
DDX39B-221ENST00000484566 AATFQ9NY61 560 aaKnown RBP eCLIP10.44□□□□□ -0.74
DDX39B-221ENST00000484566 ZNF236Q9UL36 1845 aa10.43□□□□□ -0.74
DDX39B-221ENST00000484566 CNMDO75829 334 aa10.43□□□□□ -0.74
DDX39B-221ENST00000484566 USP14P54578 494 aa10.43□□□□□ -0.74
DDX39B-221ENST00000484566 TFCP2Q12800 502 aa10.43□□□□□ -0.74
DDX39B-221ENST00000484566 SNX17Q15036 470 aa10.43□□□□□ -0.74
DDX39B-221ENST00000484566 AKNAD1Q5T1N1 836 aa10.43□□□□□ -0.74
DDX39B-221ENST00000484566 NAA16Q6N069 864 aaPredicted RBP10.43□□□□□ -0.74
DDX39B-221ENST00000484566 BLOC1S3Q6QNY0 202 aa10.43□□□□□ -0.74
DDX39B-221ENST00000484566 DPP9Q86TI2 863 aa10.43□□□□□ -0.74
DDX39B-221ENST00000484566 PARP9Q8IXQ6 854 aa10.43□□□□□ -0.74
DDX39B-221ENST00000484566 TGFBRAP1Q8WUH2 860 aa10.43□□□□□ -0.74
DDX39B-221ENST00000484566 REPIN1Q9BWE0 567 aaKnown RBP10.43□□□□□ -0.74
DDX39B-221ENST00000484566 SMC4Q9NTJ3 1288 aa10.43□□□□□ -0.74
DDX39B-221ENST00000484566 DCHS1Q96JQ0 3298 aa10.43□□□□□ -0.74
DDX39B-221ENST00000484566 KRT37O76014 449 aa10.42□□□□□ -0.74
DDX39B-221ENST00000484566 GH2P01242 217 aa10.42□□□□□ -0.74
DDX39B-221ENST00000484566 ARID4AP29374 1257 aaPredicted RBP10.42□□□□□ -0.74
DDX39B-221ENST00000484566 JAG1P78504 1218 aa10.42□□□□□ -0.74
DDX39B-221ENST00000484566 FUT2Q10981 343 aa10.42□□□□□ -0.74
DDX39B-221ENST00000484566 SHROOM1Q2M3G4 852 aaPredicted RBP10.42□□□□□ -0.74
DDX39B-221ENST00000484566 OLFML2BQ68BL8 750 aa10.42□□□□□ -0.74
DDX39B-221ENST00000484566 METTL16Q86W50 562 aaKnown RBP10.42□□□□□ -0.74
DDX39B-221ENST00000484566 TRPV1Q8NER1 839 aa10.42□□□□□ -0.74
DDX39B-221ENST00000484566 NPLOC4Q8TAT6 608 aa10.42□□□□□ -0.74
DDX39B-221ENST00000484566 SLC5A4Q9NY91 659 aa10.42□□□□□ -0.74
DDX39B-221ENST00000484566 PALD1Q9ULE6 856 aa10.42□□□□□ -0.74
DDX39B-221ENST00000484566 KMT2BQ9UMN6 2715 aaPredicted RBP10.42□□□□□ -0.74
DDX39B-221ENST00000484566 MYH1P12882 1939 aa10.42□□□□□ -0.74
DDX39B-221ENST00000484566 TRIM43BA6NCK2 446 aa10.41□□□□□ -0.74
DDX39B-221ENST00000484566 SEPT4O43236 478 aa10.41□□□□□ -0.74
DDX39B-221ENST00000484566 SRGAP3O43295 1099 aa10.41□□□□□ -0.74
DDX39B-221ENST00000484566 CLTBP09497 229 aa10.41□□□□□ -0.74
DDX39B-221ENST00000484566 UQCRFS1P1P0C7P4 283 aa10.41□□□□□ -0.74
DDX39B-221ENST00000484566 VCAM1P19320 739 aa10.41□□□□□ -0.74
DDX39B-221ENST00000484566 MCAMP43121 646 aa10.41□□□□□ -0.74
DDX39B-221ENST00000484566 ALDH1L2Q3SY69 923 aa10.41□□□□□ -0.74
DDX39B-221ENST00000484566 C1orf53Q5VUE5 145 aa10.41□□□□□ -0.74
DDX39B-221ENST00000484566 ANO1Q5XXA6 986 aa10.41□□□□□ -0.74
DDX39B-221ENST00000484566 LBX2Q6XYB7 198 aa10.41□□□□□ -0.74
DDX39B-221ENST00000484566 CATSPERGQ6ZRH7 1159 aa10.41□□□□□ -0.74
DDX39B-221ENST00000484566 FERMT2Q96AC1 680 aa10.41□□□□□ -0.74
DDX39B-221ENST00000484566 TRIM43Q96BQ3 446 aaPredicted RBP10.41□□□□□ -0.74
DDX39B-221ENST00000484566 FBXL18Q96ME1 805 aa10.41□□□□□ -0.74
DDX39B-221ENST00000484566 GAS2L1Q99501 681 aaPredicted RBP10.41□□□□□ -0.74
DDX39B-221ENST00000484566 KCNH6Q9H252 994 aa10.41□□□□□ -0.74
DDX39B-221ENST00000484566 SAP30BPQ9UHR5 308 aaKnown RBP10.41□□□□□ -0.74
DDX39B-221ENST00000484566 TACC3Q9Y6A5 838 aa10.41□□□□□ -0.74
DDX39B-221ENST00000484566 CHD8Q9HCK8 2581 aa10.41□□□□□ -0.74
DDX39B-221ENST00000484566 PRR33A8MZF0 331 aa10.4□□□□□ -0.74
DDX39B-221ENST00000484566 E9PSI1 815 aa10.4□□□□□ -0.74
DDX39B-221ENST00000484566 ANP32CO43423 234 aa10.4□□□□□ -0.74
DDX39B-221ENST00000484566 RAG1P15918 1043 aa10.4□□□□□ -0.74
DDX39B-221ENST00000484566 ADORA2AP29274 412 aa10.4□□□□□ -0.74
DDX39B-221ENST00000484566 ADCYAP1R1P41586 468 aa10.4□□□□□ -0.74
DDX39B-221ENST00000484566 FPGSQ05932 587 aa10.4□□□□□ -0.74
DDX39B-221ENST00000484566 RAB3GAP1Q15042 981 aa10.4□□□□□ -0.74
DDX39B-221ENST00000484566 PUS10Q3MIT2 529 aaKnown RBP10.4□□□□□ -0.74
DDX39B-221ENST00000484566 SH3RF1Q7Z6J0 888 aa10.4□□□□□ -0.74
DDX39B-221ENST00000484566 SCUBE3Q8IX30 993 aa10.4□□□□□ -0.74
DDX39B-221ENST00000484566 FAM9BQ8IZU0 186 aa10.4□□□□□ -0.74
DDX39B-221ENST00000484566 API5Q9BZZ5 524 aaKnown RBP10.4□□□□□ -0.74
DDX39B-221ENST00000484566 KIAA1683Q9H0B3 1180 aa10.4□□□□□ -0.74
DDX39B-221ENST00000484566 BTBD7Q9P203 1132 aa10.4□□□□□ -0.74
DDX39B-221ENST00000484566 ZNF521Q96K83 1311 aa10.39□□□□□ -0.75
DDX39B-221ENST00000484566 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.39□□□□□ -0.75
DDX39B-221ENST00000484566 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.39□□□□□ -0.75
DDX39B-221ENST00000484566 STRNO43815 780 aa10.39□□□□□ -0.75
DDX39B-221ENST00000484566 TLE2Q04725 743 aa10.39□□□□□ -0.75
DDX39B-221ENST00000484566 LRRC41Q15345 812 aa10.39□□□□□ -0.75
DDX39B-221ENST00000484566 FAM47AQ5JRC9 791 aa10.39□□□□□ -0.75
DDX39B-221ENST00000484566 TTC39AQ5SRH9 613 aa10.39□□□□□ -0.75
DDX39B-221ENST00000484566 ZNF516Q92618 1163 aa10.39□□□□□ -0.75
DDX39B-221ENST00000484566 TIFAQ96CG3 184 aa10.39□□□□□ -0.75
DDX39B-221ENST00000484566 MEIS3Q99687 375 aa10.39□□□□□ -0.75
DDX39B-221ENST00000484566 ZNF576Q9H609 170 aa10.39□□□□□ -0.75
DDX39B-221ENST00000484566 RPAP3Q9H6T3 665 aaPredicted RBP10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms