RNA–Protein interactions for RNA: ENST00000484441.1

CCDC66-219, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 302 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-219ENST00000484441 ENDOUP21128 410 aaKnown RBP8.12□□□□□ -1.11
CCDC66-219ENST00000484441 ZNF445P59923 1031 aa8.12□□□□□ -1.11
CCDC66-219ENST00000484441 TIGD5Q53EQ6 642 aa8.12□□□□□ -1.11
CCDC66-219ENST00000484441 TMEM67Q5HYA8 995 aa8.12□□□□□ -1.11
CCDC66-219ENST00000484441 CPLX3Q8WVH0 158 aa8.12□□□□□ -1.11
CCDC66-219ENST00000484441 SYTL4Q96C24 671 aaPredicted RBP8.12□□□□□ -1.11
CCDC66-219ENST00000484441 KLHL25Q9H0H3 589 aa8.12□□□□□ -1.11
CCDC66-219ENST00000484441 ZNF451Q9Y4E5 1061 aa8.12□□□□□ -1.11
CCDC66-219ENST00000484441 A0A087WZG4 1122 aa8.11□□□□□ -1.11
CCDC66-219ENST00000484441 TP53P04637 393 aaPredicted RBP8.11□□□□□ -1.11
CCDC66-219ENST00000484441 RPL10P27635 214 aaKnown RBP8.11□□□□□ -1.11
CCDC66-219ENST00000484441 KIR2DL1P43626 348 aaPredicted RBP8.11□□□□□ -1.11
CCDC66-219ENST00000484441 KIR2DL2P43627 348 aaPredicted RBP8.11□□□□□ -1.11
CCDC66-219ENST00000484441 CEBPAP49715 358 aaPredicted RBP8.11□□□□□ -1.11
CCDC66-219ENST00000484441 CRTC3Q6UUV7 619 aa8.11□□□□□ -1.11
CCDC66-219ENST00000484441 WAPLQ7Z5K2 1190 aa8.11□□□□□ -1.11
CCDC66-219ENST00000484441 SPPL2CQ8IUH8 684 aa8.11□□□□□ -1.11
CCDC66-219ENST00000484441 LIN37Q96GY3 246 aaPredicted RBP8.11□□□□□ -1.11
CCDC66-219ENST00000484441 FCRL2Q96LA5 508 aaPredicted RBP8.11□□□□□ -1.11
CCDC66-219ENST00000484441 HAUS7Q99871 368 aa8.11□□□□□ -1.11
CCDC66-219ENST00000484441 E9PSI1 815 aa8.1□□□□□ -1.11
CCDC66-219ENST00000484441 VAV1P15498 845 aa8.1□□□□□ -1.11
CCDC66-219ENST00000484441 TRHRP34981 398 aaPredicted RBP8.1□□□□□ -1.11
CCDC66-219ENST00000484441 GNL2Q13823 731 aaKnown RBP8.1□□□□□ -1.11
CCDC66-219ENST00000484441 SLC43A3Q8NBI5 491 aa8.1□□□□□ -1.11
CCDC66-219ENST00000484441 SHISA4Q96DD7 197 aa8.1□□□□□ -1.11
CCDC66-219ENST00000484441 GOLGA2P5Q9HBQ8 144 aa8.1□□□□□ -1.11
CCDC66-219ENST00000484441 MEIS1O00470 390 aa8.09□□□□□ -1.11
CCDC66-219ENST00000484441 EFEMP2O95967 443 aa8.09□□□□□ -1.11
CCDC66-219ENST00000484441 ITGA4P13612 1032 aa8.09□□□□□ -1.11
CCDC66-219ENST00000484441 SLC7A5Q01650 507 aa8.09□□□□□ -1.11
CCDC66-219ENST00000484441 MESP2Q0VG99 397 aa8.09□□□□□ -1.11
CCDC66-219ENST00000484441 SNX17Q15036 470 aa8.09□□□□□ -1.11
CCDC66-219ENST00000484441 GNPTABQ3T906 1256 aa8.09□□□□□ -1.11
CCDC66-219ENST00000484441 RTP2Q5QGT7 225 aa8.09□□□□□ -1.11
CCDC66-219ENST00000484441 ZPBP2Q6X784 338 aa8.09□□□□□ -1.11
CCDC66-219ENST00000484441 VPS37DQ86XT2 251 aa8.09□□□□□ -1.11
CCDC66-219ENST00000484441 HHIPL1Q96JK4 782 aa8.09□□□□□ -1.11
CCDC66-219ENST00000484441 GMLQ99445 158 aa8.09□□□□□ -1.11
CCDC66-219ENST00000484441 DSCC1Q9BVC3 393 aa8.09□□□□□ -1.11
CCDC66-219ENST00000484441 RNF32Q9H0A6 362 aa8.09□□□□□ -1.11
CCDC66-219ENST00000484441 C19orf44Q9H6X5 657 aa8.09□□□□□ -1.11
CCDC66-219ENST00000484441 ERVK13-1Q9NX77 482 aa8.09□□□□□ -1.11
CCDC66-219ENST00000484441 WHRNQ9P202 907 aa8.09□□□□□ -1.11
CCDC66-219ENST00000484441 PCDHB10Q9UN67 800 aa8.09□□□□□ -1.11
CCDC66-219ENST00000484441 SSU72P8A0A1W2PR75 194 aa8.08□□□□□ -1.12
CCDC66-219ENST00000484441 LRRC10BA6NIK2 292 aa8.08□□□□□ -1.12
CCDC66-219ENST00000484441 H0Y8X5 98 aa8.08□□□□□ -1.12
CCDC66-219ENST00000484441 NRDCO43847 1150 aa8.08□□□□□ -1.12
CCDC66-219ENST00000484441 FKTNO75072 461 aa8.08□□□□□ -1.12
CCDC66-219ENST00000484441 FIBCD1Q8N539 461 aa8.08□□□□□ -1.12
CCDC66-219ENST00000484441 ANAPC16Q96DE5 110 aa8.08□□□□□ -1.12
CCDC66-219ENST00000484441 SLC12A9Q9BXP2 914 aa8.08□□□□□ -1.12
CCDC66-219ENST00000484441 CWC22Q9HCG8 908 aaKnown RBP8.08□□□□□ -1.12
CCDC66-219ENST00000484441 FAM86C1Q9NVL1 165 aa8.08□□□□□ -1.12
CCDC66-219ENST00000484441 SUSD2Q9UGT4 822 aa8.08□□□□□ -1.12
CCDC66-219ENST00000484441 FADS2P1A8MWK0 482 aa8.07□□□□□ -1.12
CCDC66-219ENST00000484441 USP2O75604 605 aaPredicted RBP8.07□□□□□ -1.12
CCDC66-219ENST00000484441 TCEAL1Q15170 157 aa8.07□□□□□ -1.12
CCDC66-219ENST00000484441 PPP2R5EQ16537 467 aa8.07□□□□□ -1.12
CCDC66-219ENST00000484441 NOL9Q5SY16 702 aaKnown RBP8.07□□□□□ -1.12
CCDC66-219ENST00000484441 NLRX1Q86UT6 975 aa8.07□□□□□ -1.12
CCDC66-219ENST00000484441 ZNF513Q8N8E2 541 aaPredicted RBP8.07□□□□□ -1.12
CCDC66-219ENST00000484441 BRF1Q92994 677 aa8.07□□□□□ -1.12
CCDC66-219ENST00000484441 TNFRSF10DQ9UBN6 386 aa8.07□□□□□ -1.12
CCDC66-219ENST00000484441 ZMYM5Q9UJ78 669 aa8.07□□□□□ -1.12
CCDC66-219ENST00000484441 YBX2Q9Y2T7 364 aaKnown RBP8.07□□□□□ -1.12
CCDC66-219ENST00000484441 PSPNO60542 156 aa8.06□□□□□ -1.12
CCDC66-219ENST00000484441 FARP2O94887 1054 aaPredicted RBP8.06□□□□□ -1.12
CCDC66-219ENST00000484441 EPHX1P07099 455 aa8.06□□□□□ -1.12
CCDC66-219ENST00000484441 MLANAQ16655 118 aa8.06□□□□□ -1.12
CCDC66-219ENST00000484441 TNNI3KQ59H18 835 aa8.06□□□□□ -1.12
CCDC66-219ENST00000484441 PRR23BQ6ZRT6 265 aa8.06□□□□□ -1.12
CCDC66-219ENST00000484441 MCF2L2Q86YR7 1114 aa8.06□□□□□ -1.12
CCDC66-219ENST00000484441 AP5S1Q9NUS5 200 aa8.06□□□□□ -1.12
CCDC66-219ENST00000484441 PRKAG3Q9UGI9 489 aa8.06□□□□□ -1.12
CCDC66-219ENST00000484441 DIS3Q9Y2L1 958 aaKnown RBP8.06□□□□□ -1.12
CCDC66-219ENST00000484441 SF3B6Q9Y3B4 125 aaKnown RBP8.06□□□□□ -1.12
CCDC66-219ENST00000484441 ARID5AQ03989 594 aa8.05□□□□□ -1.12
CCDC66-219ENST00000484441 CWF19L1Q69YN2 538 aaKnown RBP8.05□□□□□ -1.12
CCDC66-219ENST00000484441 HEATR6Q6AI08 1181 aaKnown RBP8.05□□□□□ -1.12
CCDC66-219ENST00000484441 VHLLQ6RSH7 139 aa8.05□□□□□ -1.12
CCDC66-219ENST00000484441 MPZL3Q6UWV2 235 aa8.05□□□□□ -1.12
CCDC66-219ENST00000484441 SLCO6A1Q86UG4 719 aa8.05□□□□□ -1.12
CCDC66-219ENST00000484441 IRF2BP1Q8IU81 584 aa8.05□□□□□ -1.12
CCDC66-219ENST00000484441 BHLHE22Q8NFJ8 381 aaPredicted RBP8.05□□□□□ -1.12
CCDC66-219ENST00000484441 RCC1LQ96I51 464 aaKnown RBP8.05□□□□□ -1.12
CCDC66-219ENST00000484441 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.05□□□□□ -1.12
CCDC66-219ENST00000484441 GBP3Q9H0R5 595 aa8.05□□□□□ -1.12
CCDC66-219ENST00000484441 NOL6Q9H6R4 1146 aaKnown RBP8.05□□□□□ -1.12
CCDC66-219ENST00000484441 SMAD7O15105 426 aaKnown RBP8.04□□□□□ -1.12
CCDC66-219ENST00000484441 SSBP05455 408 aaKnown RBP eCLIP8.04□□□□□ -1.12
CCDC66-219ENST00000484441 ZNF143P52747 638 aaPredicted RBP8.04□□□□□ -1.12
CCDC66-219ENST00000484441 KIAA1211LQ6NV74 962 aa8.04□□□□□ -1.12
CCDC66-219ENST00000484441 CEP128Q6ZU80 1094 aa8.04□□□□□ -1.12
CCDC66-219ENST00000484441 TMEM52Q8NDY8 209 aa8.04□□□□□ -1.12
CCDC66-219ENST00000484441 INTS4Q96HW7 963 aaKnown RBP8.04□□□□□ -1.12
CCDC66-219ENST00000484441 FAM84AQ96KN4 292 aa8.04□□□□□ -1.12
CCDC66-219ENST00000484441 CDADC1Q9BWV3 514 aa8.04□□□□□ -1.12
CCDC66-219ENST00000484441 SLC6A17Q9H1V8 727 aa8.04□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms